Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:06:49 (3397575): wrapper (7.7.26015): starting
01:06:49 (3397575): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 01:06:49] Arguments: --nthreads 8
[2025-05-25 01:06:49] Threads: 8
[2025-05-25 01:06:49] Checking for CVMFS
[2025-05-25 01:06:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 01:06:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 01:06:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 01:06:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 01:06:51] 2.12.6.0 1062744 8405 283052 146390 2 538 23203729 32935937 26459 16776704 0 34101406 99.529 41050113 35028 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 01:06:51] CVMFS is ok
[2025-05-25 01:06:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 01:06:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 01:06:51] Further information can be found at the LHC@home message board.
[2025-05-25 01:06:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 01:06:51] Checking for apptainer binary...
[2025-05-25 01:06:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 01:06:51] Running /usr/bin/apptainer --version
[2025-05-25 01:06:51] apptainer version 1.4.1-1.el9
[2025-05-25 01:06:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 01:06:52] c6-4-5-2.aglt2.org
[2025-05-25 01:06:52] apptainer works
[2025-05-25 01:06:52] Set ATHENA_PROC_NUMBER=8
[2025-05-25 01:06:52] Set ATHENA_CORE_NUMBER=8
[2025-05-25 01:06:52] Starting ATLAS job with PandaID=6665679280
[2025-05-25 01:06:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 06:48:11]  *** The last 200 lines of the pilot log: ***
[2025-05-25 06:48:11] 2025-05-25 10:47:57,682 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665679280/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,683 | INFO     | extracted standard info from prmon json
[2025-05-25 06:48:11] 2025-05-25 10:47:57,683 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 06:48:11] 2025-05-25 10:47:57,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 06:48:11] 2025-05-25 10:47:57,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 06:48:11] 2025-05-25 10:47:57,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 06:48:11] 2025-05-25 10:47:57,688 | INFO     | fitting pss+swap vs Time
[2025-05-25 06:48:11] 2025-05-25 10:47:57,689 | INFO     | sum of square deviations: 11347050716.876451
[2025-05-25 06:48:11] 2025-05-25 10:47:57,691 | INFO     | sum of deviations: 154614123370.3374
[2025-05-25 06:48:11] 2025-05-25 10:47:57,692 | INFO     | mean x: 1748159948.1114457
[2025-05-25 06:48:11] 2025-05-25 10:47:57,692 | INFO     | mean y: 2057232.9638554216
[2025-05-25 06:48:11] 2025-05-25 10:47:57,692 | INFO     | -- intersect: -23818248556.837845
[2025-05-25 06:48:11] 2025-05-25 10:47:57,692 | INFO     | intersect: -23818248556.837845
[2025-05-25 06:48:11] 2025-05-25 10:47:57,692 | INFO     | chi2: 4.870315585190921
[2025-05-25 06:48:11] 2025-05-25 10:47:57,693 | INFO     | sum of square deviations: 10842076855.449629
[2025-05-25 06:48:11] 2025-05-25 10:47:57,695 | INFO     | sum of deviations: 175722459813.89
[2025-05-25 06:48:11] 2025-05-25 10:47:57,700 | INFO     | mean x: 1748159795.6146789
[2025-05-25 06:48:11] 2025-05-25 10:47:57,700 | INFO     | mean y: 2063534.1896024465
[2025-05-25 06:48:11] 2025-05-25 10:47:57,700 | INFO     | -- intersect: -28331155601.658257
[2025-05-25 06:48:11] 2025-05-25 10:47:57,700 | INFO     | intersect: -28331155601.658257
[2025-05-25 06:48:11] 2025-05-25 10:47:57,700 | INFO     | chi2: 4.060783671396029
[2025-05-25 06:48:11] 2025-05-25 10:47:57,700 | INFO     | current chi2=4.060783671396029 (change=16.62175478435978 %)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,701 | INFO     | right removable region: 326
[2025-05-25 06:48:11] 2025-05-25 10:47:57,701 | INFO     | sum of square deviations: 10841993284.978539
[2025-05-25 06:48:11] 2025-05-25 10:47:57,703 | INFO     | sum of deviations: 78708842153.29361
[2025-05-25 06:48:11] 2025-05-25 10:47:57,703 | INFO     | mean x: 1748160100.620795
[2025-05-25 06:48:11] 2025-05-25 10:47:57,703 | INFO     | mean y: 2080107.486238532
[2025-05-25 06:48:11] 2025-05-25 10:47:57,704 | INFO     | -- intersect: -12688912572.714485
[2025-05-25 06:48:11] 2025-05-25 10:47:57,704 | INFO     | intersect: -12688912572.714485
[2025-05-25 06:48:11] 2025-05-25 10:47:57,704 | INFO     | chi2: 1.9910215017450166
[2025-05-25 06:48:11] 2025-05-25 10:47:57,704 | INFO     | current chi2=1.9910215017450166 (change=59.119250756581785 %)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,704 | INFO     | sum of square deviations: 10352145440.521755
[2025-05-25 06:48:11] 2025-05-25 10:47:57,707 | INFO     | sum of deviations: 41138439564.34778
[2025-05-25 06:48:11] 2025-05-25 10:47:57,707 | INFO     | mean x: 1748160253.1304348
[2025-05-25 06:48:11] 2025-05-25 10:47:57,707 | INFO     | mean y: 2091790.0869565217
[2025-05-25 06:48:11] 2025-05-25 10:47:57,707 | INFO     | -- intersect: -6944930480.359106
[2025-05-25 06:48:11] 2025-05-25 10:47:57,707 | INFO     | intersect: -6944930480.359106
[2025-05-25 06:48:11] 2025-05-25 10:47:57,707 | INFO     | chi2: 1.3654495837957006
[2025-05-25 06:48:11] 2025-05-25 10:47:57,708 | INFO     | current chi2=1.3654495837957006 (change=31.419646518183654 %)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,708 | INFO     | sum of square deviations: 9877313783.552118
[2025-05-25 06:48:11] 2025-05-25 10:47:57,710 | INFO     | sum of deviations: 21092659708.053623
[2025-05-25 06:48:11] 2025-05-25 10:47:57,710 | INFO     | mean x: 1748160405.6340694
[2025-05-25 06:48:11] 2025-05-25 10:47:57,710 | INFO     | mean y: 2098223.1987381703
[2025-05-25 06:48:11] 2025-05-25 10:47:57,710 | INFO     | -- intersect: -3731037461.174739
[2025-05-25 06:48:11] 2025-05-25 10:47:57,710 | INFO     | intersect: -3731037461.174739
[2025-05-25 06:48:11] 2025-05-25 10:47:57,711 | INFO     | chi2: 1.1782771794034188
[2025-05-25 06:48:11] 2025-05-25 10:47:57,711 | INFO     | current chi2=1.1782771794034188 (change=13.707749199496376 %)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,711 | INFO     | left removable region: 30
[2025-05-25 06:48:11] 2025-05-25 10:47:57,711 | INFO     | sum of square deviations: 8041458081.320949
[2025-05-25 06:48:11] 2025-05-25 10:47:57,713 | INFO     | sum of deviations: 16490760572.655413
[2025-05-25 06:48:11] 2025-05-25 10:47:57,713 | INFO     | mean x: 1748160680.1385136
[2025-05-25 06:48:11] 2025-05-25 10:47:57,714 | INFO     | mean y: 2114558.3986486485
[2025-05-25 06:48:11] 2025-05-25 10:47:57,714 | INFO     | -- intersect: -3582869523.7367506
[2025-05-25 06:48:11] 2025-05-25 10:47:57,714 | INFO     | intersect: -3582869523.7367506
[2025-05-25 06:48:11] 2025-05-25 10:47:57,714 | INFO     | chi2: 0.2107940574305788
[2025-05-25 06:48:11] 2025-05-25 10:47:57,714 | INFO     | -- intersect: -3582869523.7367506
[2025-05-25 06:48:11] 2025-05-25 10:47:57,714 | INFO     | current memory leak: 2.05 B/s (using 296 data points, chi2=0.21)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | ..............................
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . Timing measurements:
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . get job = 0 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . initial setup = 8 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . payload setup = 53 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . stage-in = 1 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . payload execution = 20242 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,715 | INFO     | . stage-out = 2 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,716 | INFO     | . log creation = 0 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,716 | INFO     | ..............................
[2025-05-25 06:48:11] 2025-05-25 10:47:57,796 | INFO     | 
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | job summary report
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | --------------------------------------------------
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | PanDA job id: 6665679280
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | task id: 44871837
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | errors: (none)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | pilot state: finished 
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | transexitcode: 0
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | exeerrorcode: 0
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | exeerrordiag: 
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | exitcode: 0
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | exitmsg: OK
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | cpuconsumptiontime: 49025 s
[2025-05-25 06:48:11] 2025-05-25 10:47:57,797 | INFO     | nevents: 400
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | neventsw: 0
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | pid: 3426931
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | pgrp: 3426931
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | corecount: 8
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | event service: False
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | sizes: {0: 2392911, 1: 2393512, 2: 2393795, 3: 2393795, 15: 2393823, 26: 2393851, 38: 2394213, 49: 2394241, 20300: 2427121, 20304: 2436062, 20305: 2436118, 20314: 
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | --------------------------------------------------
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | 
[2025-05-25 06:48:11] 2025-05-25 10:47:57,798 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 06:48:11] 2025-05-25 10:47:57,824 | INFO     | job 6665679280 has completed (purged errors)
[2025-05-25 06:48:11] 2025-05-25 10:47:57,825 | INFO     | overall cleanup function is called
[2025-05-25 06:48:11] 2025-05-25 10:47:58,833 | INFO     | --- collectZombieJob: --- 10, [3426931]
[2025-05-25 06:48:11] 2025-05-25 10:47:58,834 | INFO     | zombie collector waiting for pid 3426931
[2025-05-25 06:48:11] 2025-05-25 10:47:58,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 06:48:11] 2025-05-25 10:47:58,834 | INFO     | collected zombie processes
[2025-05-25 06:48:11] 2025-05-25 10:47:58,834 | INFO     | will attempt to kill all subprocesses of pid=3426931
[2025-05-25 06:48:11] 2025-05-25 10:47:59,540 | INFO     | process IDs to be killed: [3426931] (in reverse order)
[2025-05-25 06:48:11] 2025-05-25 10:47:59,698 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 06:48:11] 2025-05-25 10:47:59,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 06:48:11] 2025-05-25 10:47:59,816 | INFO     | did not find any defunct processes belonging to 3426931
[2025-05-25 06:48:11] 2025-05-25 10:47:59,889 | INFO     | did not find any defunct processes belonging to 3426931
[2025-05-25 06:48:11] 2025-05-25 10:47:59,890 | INFO     | ready for new job
[2025-05-25 06:48:11] 2025-05-25 10:47:59,890 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 06:48:11] 2025-05-25 10:47:59,895 | INFO     | **************************************
[2025-05-25 06:48:11] 2025-05-25 10:47:59,895 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 06:48:11] 2025-05-25 10:47:59,895 | INFO     | **************************************
[2025-05-25 06:48:11] 2025-05-25 10:47:59,895 | INFO     | 
[2025-05-25 06:48:11] 2025-05-25 10:47:59,910 | INFO     | architecture information:
[2025-05-25 06:48:11] 2025-05-25 10:47:59,911 | INFO     | executing command: cat /etc/os-release
[2025-05-25 06:48:11] 2025-05-25 10:47:59,939 | INFO     | cat /etc/os-release:
[2025-05-25 06:48:11] NAME="CentOS Linux"
[2025-05-25 06:48:11] VERSION="7 (Core)"
[2025-05-25 06:48:11] ID="centos"
[2025-05-25 06:48:11] ID_LIKE="rhel fedora"
[2025-05-25 06:48:11] VERSION_ID="7"
[2025-05-25 06:48:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 06:48:11] ANSI_COLOR="0;31"
[2025-05-25 06:48:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 06:48:11] HOME_URL="https://www.centos.org/"
[2025-05-25 06:48:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 06:48:11] 
[2025-05-25 06:48:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 06:48:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 06:48:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 06:48:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 06:48:11] 
[2025-05-25 06:48:11] 2025-05-25 10:47:59,940 | INFO     | **************************************
[2025-05-25 06:48:11] 2025-05-25 10:48:00,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 06:48:11] 2025-05-25 10:48:00,472 | INFO     | sufficient remaining disk space (74759274496 B)
[2025-05-25 06:48:11] 2025-05-25 10:48:00,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 06:48:11] 2025-05-25 10:48:00,472 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 06:48:11] 2025-05-25 10:48:00,473 | INFO     | update_server=False
[2025-05-25 06:48:11] 2025-05-25 10:48:00,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 06:48:11] 2025-05-25 10:48:00,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 06:48:11] 2025-05-25 10:48:00,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:48:11] 2025-05-25 10:48:00,474 | INFO     | aborting loop
[2025-05-25 06:48:11] 2025-05-25 10:48:00,482 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 06:48:11] 2025-05-25 10:48:00,483 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 06:48:11] 2025-05-25 10:48:00,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 06:48:11] 2025-05-25 10:48:00,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 06:48:11] 2025-05-25 10:48:00,962 | INFO     | all payload control threads have been joined
[2025-05-25 06:48:11] 2025-05-25 10:48:01,183 | INFO     | all data control threads have been joined
[2025-05-25 06:48:11] 2025-05-25 10:48:01,479 | INFO     | [job] job monitor thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:01,480 | INFO     | [job] retrieve thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:01,575 | INFO     | all job control threads have been joined
[2025-05-25 06:48:11] 2025-05-25 10:48:01,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 06:48:11] 2025-05-25 10:48:01,715 | INFO     | [job] validate thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:01,813 | INFO     | [payload] validate_post thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:01,909 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:01,970 | INFO     | [payload] control thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,139 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,156 | INFO     | [data] copytool_in thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,189 | INFO     | [data] control thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,581 | INFO     | [job] control thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,669 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:02,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:48:11] 2025-05-25 10:48:02,932 | INFO     | [payload] failed_post thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:03,713 | INFO     | [data] copytool_out thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:03,815 | INFO     | [job] queue monitor thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:04,495 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 06:48:11] 2025-05-25 10:48:05,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938639218496)>', '<ExcThread(monitor, started 139937861060352)>']
[2025-05-25 06:48:11] 2025-05-25 10:48:06,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 06:48:11] 2025-05-25 10:48:06,517 | INFO     | [monitor] control thread has ended
[2025-05-25 06:48:11] 2025-05-25 10:48:10,848 | INFO     | all workflow threads have been joined
[2025-05-25 06:48:11] 2025-05-25 10:48:10,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 06:48:11] 2025-05-25 10:48:10,849 | INFO     | traces error code: 0
[2025-05-25 06:48:11] 2025-05-25 10:48:10,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 06:48:11] 2025-05-25 10:48:11,154 [wrapper] ==== pilot stdout END ====
[2025-05-25 06:48:11] 2025-05-25 10:48:11,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 06:48:11] 2025-05-25 10:48:11,162 [wrapper] pilotpid: 3408176
[2025-05-25 06:48:11] 2025-05-25 10:48:11,167 [wrapper] Pilot exit status: 0
[2025-05-25 06:48:11] 2025-05-25 10:48:11,184 [wrapper] pandaids: 6665679280
[2025-05-25 06:48:11] 2025-05-25 10:48:11,265 [wrapper] cleanup supervisor_pilot 1483347 3408177
[2025-05-25 06:48:11] 2025-05-25 10:48:11,268 [wrapper] Test setup, not cleaning
[2025-05-25 06:48:11] 2025-05-25 10:48:11,272 [wrapper] apfmon messages muted
[2025-05-25 06:48:11] 2025-05-25 10:48:11,291 [wrapper] ==== wrapper stdout END ====
[2025-05-25 06:48:11] 2025-05-25 10:48:11,295 [wrapper] ==== wrapper stderr END ====
[2025-05-25 06:48:11]  *** Error codes and diagnostics ***
[2025-05-25 06:48:11]     "exeErrorCode": 0,
[2025-05-25 06:48:11]     "exeErrorDiag": "",
[2025-05-25 06:48:11]     "pilotErrorCode": 0,
[2025-05-25 06:48:11]     "pilotErrorDiag": "",
[2025-05-25 06:48:11]  *** Listing of results directory ***
[2025-05-25 06:48:11] total 418488
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas    495897 May 24 15:53 pilot3.tar.gz
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas      5111 May 24 16:24 queuedata.json
[2025-05-25 06:48:11] -rwx------. 1 boincer umatlas     37140 May 24 16:24 runpilot2-wrapper.sh
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas       100 May 25 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 06:48:11] -rwxr-xr-x. 1 boincer umatlas      7986 May 25 01:06 run_atlas
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas       105 May 25 01:06 job.xml
[2025-05-25 06:48:11] -rw-r--r--. 2 boincer umatlas 222582940 May 25 01:06 EVNT.44871834._000936.pool.root.1
[2025-05-25 06:48:11] -rw-r--r--. 2 boincer umatlas    508879 May 25 01:06 input.tar.gz
[2025-05-25 06:48:11] -rw-r--r--. 2 boincer umatlas     15093 May 25 01:06 start_atlas.sh
[2025-05-25 06:48:11] drwxrwx--x. 2 boincer umatlas      4096 May 25 01:06 shared
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas         0 May 25 01:06 boinc_lockfile
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas      2558 May 25 01:06 pandaJob.out
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas    990803 May 25 01:07 agis_schedconf.cvmfs.json
[2025-05-25 06:48:11] drwx------. 4 boincer umatlas      4096 May 25 01:08 pilot3
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas      6856 May 25 06:38 init_data.xml
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas 198078547 May 25 06:47 HITS.44871837._023492.pool.root.1
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas       531 May 25 06:47 boinc_task_state.xml
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas        95 May 25 06:47 pilot_heartbeat.json
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas      1044 May 25 06:47 memory_monitor_summary.json
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas   1596740 May 25 06:47 agis_ddmendpoints.agis.ALL.json
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas    449380 May 25 06:47 log.44871837._023492.job.log.tgz.1
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas      7720 May 25 06:47 heartbeat.json
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas      4476 May 25 06:48 pilotlog.txt
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas        28 May 25 06:48 wrapper_checkpoint.txt
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas      8192 May 25 06:48 boinc_mmap_file
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas   1566206 May 25 06:48 log.44871837._023492.job.log.1
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas       357 May 25 06:48 output.list
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas       620 May 25 06:48 runtime_log
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas   2037760 May 25 06:48 result.tar.gz
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas      8660 May 25 06:48 runtime_log.err
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas       656 May 25 06:48 QIjNDmCbAd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbUSKDmhEwbhm.diag
[2025-05-25 06:48:11] -rw-r--r--. 1 boincer umatlas     21002 May 25 06:48 stderr.txt
[2025-05-25 06:48:11] HITS file was successfully produced:
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas 198078547 May 25 06:47 shared/HITS.pool.root.1
[2025-05-25 06:48:11]  *** Contents of shared directory: ***
[2025-05-25 06:48:11] total 413324
[2025-05-25 06:48:11] -rw-r--r--. 2 boincer umatlas 222582940 May 25 01:06 ATLAS.root_0
[2025-05-25 06:48:11] -rw-r--r--. 2 boincer umatlas    508879 May 25 01:06 input.tar.gz
[2025-05-25 06:48:11] -rw-r--r--. 2 boincer umatlas     15093 May 25 01:06 start_atlas.sh
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas 198078547 May 25 06:47 HITS.pool.root.1
[2025-05-25 06:48:11] -rw-------. 1 boincer umatlas   2037760 May 25 06:48 result.tar.gz
06:48:13 (3397575): run_atlas exited; CPU time 49647.092995
06:48:13 (3397575): called boinc_finish(0)

</stderr_txt>
]]>

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