Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:14 (5249): wrapper (7.7.26015): starting
11:32:14 (5249): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 11:32:14] Arguments: --nthreads 8
[2025-05-25 11:32:14] Threads: 8
[2025-05-25 11:32:14] Checking for CVMFS
[2025-05-25 11:32:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:32:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:32:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:32:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:32:17] 2.11.2.0 13493 18759 92544 146397 0 15 21244988 25165825 1909 130560 0 9731121 99.696 13081231 2308 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 11:32:17] CVMFS is ok
[2025-05-25 11:32:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:32:17] Checking for apptainer binary...
[2025-05-25 11:32:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:32:17] Running /usr/bin/apptainer --version
[2025-05-25 11:32:17] apptainer version 1.3.2-1.el7
[2025-05-25 11:32:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:32:18] cg-vwn488.simple-grid.lan
[2025-05-25 11:32:18] apptainer works
[2025-05-25 11:32:18] Set ATHENA_PROC_NUMBER=8
[2025-05-25 11:32:18] Set ATHENA_CORE_NUMBER=8
[2025-05-25 11:32:18] Starting ATLAS job with PandaID=6665681204
[2025-05-25 11:32:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 17:54:41]  *** The last 200 lines of the pilot log: ***
[2025-05-25 17:54:41] 2025-05-25 14:06:03,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 17:54:41] 2025-05-25 14:06:03,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 17:54:41] 2025-05-25 14:06:03,652 | INFO     | fitting pss+swap vs Time
[2025-05-25 17:54:41] 2025-05-25 14:06:03,652 | INFO     | sum of square deviations: 5902093918.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,654 | INFO     | sum of deviations: -20238403649.000004
[2025-05-25 17:54:41] 2025-05-25 14:06:03,655 | INFO     | mean x: 1748173721.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,655 | INFO     | mean y: 2504712.3408239703
[2025-05-25 17:54:41] 2025-05-25 14:06:03,655 | INFO     | -- intersect: 5997029012.652427
[2025-05-25 17:54:41] 2025-05-25 14:06:03,655 | INFO     | intersect: 5997029012.652427
[2025-05-25 17:54:41] 2025-05-25 14:06:03,655 | INFO     | chi2: 2.4506245059375615
[2025-05-25 17:54:41] 2025-05-25 14:06:03,656 | INFO     | sum of square deviations: 5576683165.5
[2025-05-25 17:54:41] 2025-05-25 14:06:03,658 | INFO     | sum of deviations: -2099181501.5000067
[2025-05-25 17:54:41] 2025-05-25 14:06:03,665 | INFO     | mean x: 1748173568.5
[2025-05-25 17:54:41] 2025-05-25 14:06:03,665 | INFO     | mean y: 2513086.8511450384
[2025-05-25 17:54:41] 2025-05-25 14:06:03,665 | INFO     | -- intersect: 660562595.40296
[2025-05-25 17:54:41] 2025-05-25 14:06:03,665 | INFO     | intersect: 660562595.40296
[2025-05-25 17:54:41] 2025-05-25 14:06:03,666 | INFO     | chi2: 1.6757238889104746
[2025-05-25 17:54:41] 2025-05-25 14:06:03,666 | INFO     | current chi2=1.6757238889104746 (change=31.620536526489396 %)
[2025-05-25 17:54:41] 2025-05-25 14:06:03,666 | INFO     | sum of square deviations: 5263458688.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,668 | INFO     | sum of deviations: -1987499010.999999
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | mean x: 1748173416.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | mean y: 2513141.237354086
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | -- intersect: 662629072.8543117
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | intersect: 662629072.8543117
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | chi2: 1.6757159633365333
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | current chi2=1.6757159633365333 (change=0.00047296419140456877 %)
[2025-05-25 17:54:41] 2025-05-25 14:06:03,669 | INFO     | right removable region: 256
[2025-05-25 17:54:41] 2025-05-25 14:06:03,670 | INFO     | sum of square deviations: 5576683165.5
[2025-05-25 17:54:41] 2025-05-25 14:06:03,672 | INFO     | sum of deviations: -60739205236.00001
[2025-05-25 17:54:41] 2025-05-25 14:06:03,672 | INFO     | mean x: 1748173873.5
[2025-05-25 17:54:41] 2025-05-25 14:06:03,672 | INFO     | mean y: 2523526.0763358776
[2025-05-25 17:54:41] 2025-05-25 14:06:03,672 | INFO     | -- intersect: 19042997682.403877
[2025-05-25 17:54:41] 2025-05-25 14:06:03,673 | INFO     | intersect: 19042997682.403877
[2025-05-25 17:54:41] 2025-05-25 14:06:03,673 | INFO     | chi2: 0.9938702116716623
[2025-05-25 17:54:41] 2025-05-25 14:06:03,673 | INFO     | current chi2=0.9938702116716623 (change=59.44420659861856 %)
[2025-05-25 17:54:41] 2025-05-25 14:06:03,673 | INFO     | sum of square deviations: 5263458688.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,675 | INFO     | sum of deviations: -55873953388.99999
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | mean x: 1748174026.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | mean y: 2521138.431906615
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | -- intersect: 18560165424.17052
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | intersect: 18560165424.17052
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | chi2: 0.982213545733677
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | current chi2=0.982213545733677 (change=1.1728559525271534 %)
[2025-05-25 17:54:41] 2025-05-25 14:06:03,676 | INFO     | left removable region: 20
[2025-05-25 17:54:41] 2025-05-25 14:06:03,677 | INFO     | sum of square deviations: 4075741535.0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | sum of deviations: -20404788774.000008
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | mean x: 1748173995.5
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | mean y: 2521360.5762711866
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | -- intersect: 8754578087.445518
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | intersect: 8754578087.445518
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | chi2: 0.14236737395623542
[2025-05-25 17:54:41] 2025-05-25 14:06:03,679 | INFO     | -- intersect: 8754578087.445518
[2025-05-25 17:54:41] 2025-05-25 14:06:03,680 | INFO     | current memory leak: -5.01 B/s (using 236 data points, chi2=0.14)
[2025-05-25 17:54:41] 2025-05-25 14:06:03,680 | INFO     | ..............................
[2025-05-25 17:54:41] 2025-05-25 14:06:03,680 | INFO     | . Timing measurements:
[2025-05-25 17:54:41] 2025-05-25 14:06:03,680 | INFO     | . get job = 0 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,680 | INFO     | . initial setup = 1 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,681 | INFO     | . payload setup = 10 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,681 | INFO     | . stage-in = 0 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,681 | INFO     | . payload execution = 16283 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,681 | INFO     | . stage-out = 3 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,681 | INFO     | . log creation = 1 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,681 | INFO     | ..............................
[2025-05-25 17:54:41] 2025-05-25 14:06:03,831 | INFO     | 
[2025-05-25 17:54:41] 2025-05-25 14:06:03,831 | INFO     | job summary report
[2025-05-25 17:54:41] 2025-05-25 14:06:03,831 | INFO     | --------------------------------------------------
[2025-05-25 17:54:41] 2025-05-25 14:06:03,831 | INFO     | PanDA job id: 6665681204
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | task id: 44871837
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | errors: (none)
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | pilot state: finished 
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | transexitcode: 0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | exeerrorcode: 0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | exeerrordiag: 
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | exitcode: 0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | exitmsg: OK
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | cpuconsumptiontime: 62299 s
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | nevents: 400
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | neventsw: 0
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | pid: 17784
[2025-05-25 17:54:41] 2025-05-25 14:06:03,832 | INFO     | pgrp: 17784
[2025-05-25 17:54:41] 2025-05-25 14:06:03,833 | INFO     | corecount: 8
[2025-05-25 17:54:41] 2025-05-25 14:06:03,833 | INFO     | event service: False
[2025-05-25 17:54:41] 2025-05-25 14:06:03,833 | INFO     | sizes: {0: 2393739, 1: 2393739, 9: 2393973, 12: 2394001, 16298: 2424839, 16302: 2433780, 16303: 2433964, 16384: 2434134}
[2025-05-25 17:54:41] 2025-05-25 14:06:03,833 | INFO     | --------------------------------------------------
[2025-05-25 17:54:41] 2025-05-25 14:06:03,833 | INFO     | 
[2025-05-25 17:54:41] 2025-05-25 14:06:03,833 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-25 17:54:41] 2025-05-25 14:06:04,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 17:54:41] 2025-05-25 14:06:04,255 | INFO     | job 6665681204 has completed (purged errors)
[2025-05-25 17:54:41] 2025-05-25 14:06:04,256 | INFO     | overall cleanup function is called
[2025-05-25 17:54:41] 2025-05-25 14:06:05,263 | INFO     | --- collectZombieJob: --- 10, [17784]
[2025-05-25 17:54:41] 2025-05-25 14:06:05,263 | INFO     | zombie collector waiting for pid 17784
[2025-05-25 17:54:41] 2025-05-25 14:06:05,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 17:54:41] 2025-05-25 14:06:05,264 | INFO     | collected zombie processes
[2025-05-25 17:54:41] 2025-05-25 14:06:05,264 | INFO     | will attempt to kill all subprocesses of pid=17784
[2025-05-25 17:54:41] 2025-05-25 14:06:05,365 | INFO     | process IDs to be killed: [17784] (in reverse order)
[2025-05-25 17:54:41] 2025-05-25 14:06:05,657 | INFO     | PID=9229 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-25 17:54:41] 2025-05-25 14:06:05,657 | INFO     | .. there are 9 such processes running
[2025-05-25 17:54:41] 2025-05-25 14:06:06,165 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 17:54:41] 2025-05-25 14:06:06,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 17:54:41] 2025-05-25 14:06:06,168 | INFO     | did not find any defunct processes belonging to 17784
[2025-05-25 17:54:41] 2025-05-25 14:06:06,171 | INFO     | did not find any defunct processes belonging to 17784
[2025-05-25 17:54:41] 2025-05-25 14:06:06,171 | INFO     | ready for new job
[2025-05-25 17:54:41] 2025-05-25 14:06:06,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 17:54:41] 2025-05-25 14:06:06,173 | INFO     | **************************************
[2025-05-25 17:54:41] 2025-05-25 14:06:06,173 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 17:54:41] 2025-05-25 14:06:06,173 | INFO     | **************************************
[2025-05-25 17:54:41] 2025-05-25 14:06:06,173 | INFO     | 
[2025-05-25 17:54:41] 2025-05-25 14:06:06,174 | INFO     | pilot is running in a VM
[2025-05-25 17:54:41] 2025-05-25 14:06:06,174 | INFO     | architecture information:
[2025-05-25 17:54:41] 2025-05-25 14:06:06,191 | INFO     | executing command: cat /etc/os-release
[2025-05-25 17:54:41] 2025-05-25 14:06:06,416 | INFO     | cat /etc/os-release:
[2025-05-25 17:54:41] NAME="CentOS Linux"
[2025-05-25 17:54:41] VERSION="7 (Core)"
[2025-05-25 17:54:41] ID="centos"
[2025-05-25 17:54:41] ID_LIKE="rhel fedora"
[2025-05-25 17:54:41] VERSION_ID="7"
[2025-05-25 17:54:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 17:54:41] ANSI_COLOR="0;31"
[2025-05-25 17:54:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 17:54:41] HOME_URL="https://www.centos.org/"
[2025-05-25 17:54:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 17:54:41] 
[2025-05-25 17:54:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 17:54:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 17:54:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 17:54:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 17:54:41] 
[2025-05-25 17:54:41] 2025-05-25 14:06:06,416 | INFO     | **************************************
[2025-05-25 17:54:41] 2025-05-25 14:06:06,919 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-25 17:54:41] 2025-05-25 14:06:07,070 | INFO     | sufficient remaining disk space (494760099840 B)
[2025-05-25 17:54:41] 2025-05-25 14:06:07,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 17:54:41] 2025-05-25 14:06:07,070 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 17:54:41] 2025-05-25 14:06:07,070 | INFO     | update_server=False
[2025-05-25 17:54:41] 2025-05-25 14:06:07,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 17:54:41] 2025-05-25 14:06:07,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 17:54:41] 2025-05-25 14:06:07,199 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 17:54:41] 2025-05-25 14:06:07,199 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 17:54:41] 2025-05-25 14:06:07,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 17:54:41] 2025-05-25 14:06:07,200 | INFO     | will abort loop
[2025-05-25 17:54:41] 2025-05-25 14:06:07,658 | INFO     | all payload control threads have been joined
[2025-05-25 17:54:41] 2025-05-25 14:06:07,664 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 17:54:41] 2025-05-25 14:06:07,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 17:54:41] 2025-05-25 14:06:07,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 17:54:41] 2025-05-25 14:06:07,665 | INFO     | all job control threads have been joined
[2025-05-25 17:54:41] 2025-05-25 14:06:08,076 | INFO     | [job] retrieve thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,164 | INFO     | all data control threads have been joined
[2025-05-25 17:54:41] 2025-05-25 14:06:08,205 | INFO     | [job] job monitor thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,465 | INFO     | [payload] validate_post thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,558 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,665 | INFO     | [payload] control thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,671 | INFO     | [job] control thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,761 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,801 | INFO     | [data] copytool_in thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 17:54:41] 2025-05-25 14:06:08,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:08,976 | INFO     | [payload] failed_post thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:09,078 | INFO     | [data] copytool_out thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:09,083 | INFO     | [job] validate thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:09,166 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:09,170 | INFO     | [data] control thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:09,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 17:54:41] 2025-05-25 14:06:09,858 | INFO     | [job] queue monitor thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:13,217 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 17:54:41] 2025-05-25 14:06:13,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716946319168)>', '<ExcThread(monitor, started 139716645066496)>']
[2025-05-25 17:54:41] 2025-05-25 14:06:14,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 17:54:41] 2025-05-25 14:06:14,705 | INFO     | [monitor] control thread has ended
[2025-05-25 17:54:41] 2025-05-25 14:06:18,793 | INFO     | all workflow threads have been joined
[2025-05-25 17:54:41] 2025-05-25 14:06:18,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 17:54:41] 2025-05-25 14:06:18,794 | INFO     | traces error code: 0
[2025-05-25 17:54:41] 2025-05-25 14:06:18,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 17:54:41] 2025-05-25 14:06:19,026 [wrapper] ==== pilot stdout END ====
[2025-05-25 17:54:41] 2025-05-25 14:06:19,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 17:54:41] 2025-05-25 14:06:19,178 [wrapper] pilotpid: 9229
[2025-05-25 17:54:41] 2025-05-25 14:06:19,220 [wrapper] Pilot exit status: 0
[2025-05-25 17:54:41] 2025-05-25 14:06:19,582 [wrapper] pandaids: 6665681204
[2025-05-25 17:54:41] 2025-05-25 14:06:20,164 [wrapper] cleanup supervisor_pilot 29814 9230
[2025-05-25 17:54:41] 2025-05-25 14:06:20,231 [wrapper] Test setup, not cleaning
[2025-05-25 17:54:41] 2025-05-25 14:06:20,305 [wrapper] apfmon messages muted
[2025-05-25 17:54:41] 2025-05-25 14:06:20,363 [wrapper] ==== wrapper stdout END ====
[2025-05-25 17:54:41] 2025-05-25 14:06:20,468 [wrapper] ==== wrapper stderr END ====
[2025-05-25 17:54:41]  *** Error codes and diagnostics ***
[2025-05-25 17:54:41]     "exeErrorCode": 0,
[2025-05-25 17:54:41]     "exeErrorDiag": "",
[2025-05-25 17:54:41]     "pilotErrorCode": 0,
[2025-05-25 17:54:41]     "pilotErrorDiag": "",
[2025-05-25 17:54:41]  *** Listing of results directory ***
[2025-05-25 17:54:41] total 417172
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc    495897 May 24 23:37 pilot3.tar.gz
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc      5111 May 24 23:43 queuedata.json
[2025-05-25 17:54:41] -rwx------. 1 boinc boinc     37140 May 24 23:44 runpilot2-wrapper.sh
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc       100 May 25 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 17:54:41] -rwxr-xr-x. 1 boinc boinc      7986 May 25 11:32 run_atlas
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc       105 May 25 11:32 job.xml
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc      6371 May 25 11:32 init_data.xml
[2025-05-25 17:54:41] -rw-r--r--. 2 boinc boinc 226845079 May 25 11:32 EVNT.44871834._000984.pool.root.1
[2025-05-25 17:54:41] -rw-r--r--. 2 boinc boinc     15093 May 25 11:32 start_atlas.sh
[2025-05-25 17:54:41] drwxrwx--x. 2 boinc boinc        68 May 25 11:32 shared
[2025-05-25 17:54:41] -rw-r--r--. 2 boinc boinc    508879 May 25 11:32 input.tar.gz
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc         0 May 25 11:32 boinc_lockfile
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc      2558 May 25 11:32 pandaJob.out
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc    990811 May 25 11:32 agis_schedconf.cvmfs.json
[2025-05-25 17:54:41] drwx------. 4 boinc boinc      4096 May 25 11:32 pilot3
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc 192892108 May 25 16:03 HITS.44871837._024679.pool.root.1
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc       531 May 25 16:03 boinc_task_state.xml
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc      1020 May 25 16:04 memory_monitor_summary.json
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc   1596740 May 25 16:04 agis_ddmendpoints.agis.ALL.json
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc    398892 May 25 16:04 log.44871837._024679.job.log.tgz.1
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc        95 May 25 16:06 pilot_heartbeat.json
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc      7689 May 25 16:06 heartbeat.json
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc      4602 May 25 16:06 pilotlog.txt
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc   1414471 May 25 16:06 log.44871837._024679.job.log.1
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc       357 May 25 16:06 output.list
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc       620 May 25 16:06 runtime_log
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc   1832960 May 25 16:06 result.tar.gz
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc      8659 May 25 16:06 runtime_log.err
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc       657 May 25 16:06 8gNMDmLqBd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrQNKDmp6U5on.diag
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc      8192 May 25 17:54 boinc_mmap_file
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc        28 May 25 17:54 wrapper_checkpoint.txt
[2025-05-25 17:54:41] -rw-r--r--. 1 boinc boinc     20570 May 25 17:54 stderr.txt
[2025-05-25 17:54:41] HITS file was successfully produced:
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc 192892108 May 25 16:03 shared/HITS.pool.root.1
[2025-05-25 17:54:41]  *** Contents of shared directory: ***
[2025-05-25 17:54:41] total 412212
[2025-05-25 17:54:41] -rw-r--r--. 2 boinc boinc 226845079 May 25 11:32 ATLAS.root_0
[2025-05-25 17:54:41] -rw-r--r--. 2 boinc boinc     15093 May 25 11:32 start_atlas.sh
[2025-05-25 17:54:41] -rw-r--r--. 2 boinc boinc    508879 May 25 11:32 input.tar.gz
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc 192892108 May 25 16:03 HITS.pool.root.1
[2025-05-25 17:54:41] -rw-------. 1 boinc boinc   1832960 May 25 16:06 result.tar.gz
17:54:43 (5249): run_atlas exited; CPU time 62492.712430
17:54:43 (5249): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN