Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:17 (775728): wrapper (7.7.26015): starting
15:31:17 (775728): wrapper: running run_atlas (--nthreads 4)
[2025-05-25 15:31:17] Arguments: --nthreads 4
[2025-05-25 15:31:17] Threads: 4
[2025-05-25 15:31:17] Checking for CVMFS
[2025-05-25 15:31:17] No cvmfs_config command found, will try listing directly
[2025-05-25 15:31:17] CVMFS is ok
[2025-05-25 15:31:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 15:31:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 15:31:17] Further information can be found at the LHC@home message board.
[2025-05-25 15:31:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 15:31:17] Checking for apptainer binary...
[2025-05-25 15:31:17] which: no apptainer in ((null))
[2025-05-25 15:31:17] apptainer is not installed, using version from CVMFS
[2025-05-25 15:31:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 15:31:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-05-25 15:31:17] apptainer works
[2025-05-25 15:31:17] Set ATHENA_PROC_NUMBER=4
[2025-05-25 15:31:17] Set ATHENA_CORE_NUMBER=4
[2025-05-25 15:31:17] Starting ATLAS job with PandaID=6665680761
[2025-05-25 15:31:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:03:03 (951559): wrapper (7.7.26015): starting
16:03:03 (951559): wrapper: running run_atlas (--nthreads 4)
[2025-05-25 16:03:03] Arguments: --nthreads 4
[2025-05-25 16:03:03] Threads: 4
[2025-05-25 16:03:03] This job has been restarted, cleaning up previous attempt
[2025-05-25 16:03:03] Checking for CVMFS
[2025-05-25 16:03:03] No cvmfs_config command found, will try listing directly
[2025-05-25 16:03:03] CVMFS is ok
[2025-05-25 16:03:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 16:03:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 16:03:03] Further information can be found at the LHC@home message board.
[2025-05-25 16:03:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 16:03:03] Checking for apptainer binary...
[2025-05-25 16:03:03] which: no apptainer in ((null))
[2025-05-25 16:03:03] apptainer is not installed, using version from CVMFS
[2025-05-25 16:03:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 16:03:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-05-25 16:03:03] apptainer works
[2025-05-25 16:03:03] Set ATHENA_PROC_NUMBER=4
[2025-05-25 16:03:03] Set ATHENA_CORE_NUMBER=4
[2025-05-25 16:03:03] Starting ATLAS job with PandaID=6665680761
[2025-05-25 16:03:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 19:51:12]  *** The last 200 lines of the pilot log: ***
[2025-05-25 19:51:12] 2025-05-25 17:50:51,084 | INFO     | using path: /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6665680761/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,085 | INFO     | extracted standard info from prmon json
[2025-05-25 19:51:12] 2025-05-25 17:50:51,085 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 19:51:12] 2025-05-25 17:50:51,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 19:51:12] 2025-05-25 17:50:51,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 19:51:12] 2025-05-25 17:50:51,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 19:51:12] 2025-05-25 17:50:51,090 | INFO     | fitting pss+swap vs Time
[2025-05-25 19:51:12] 2025-05-25 17:50:51,091 | INFO     | sum of square deviations: 3438620752.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,092 | INFO     | sum of deviations: 19707446228.999992
[2025-05-25 19:51:12] 2025-05-25 17:50:51,092 | INFO     | mean x: 1748188664.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,092 | INFO     | mean y: 2294538.130044843
[2025-05-25 19:51:12] 2025-05-25 17:50:51,093 | INFO     | -- intersect: -10016936013.505775
[2025-05-25 19:51:12] 2025-05-25 17:50:51,093 | INFO     | intersect: -10016936013.505775
[2025-05-25 19:51:12] 2025-05-25 17:50:51,093 | INFO     | chi2: 2.311819745073686
[2025-05-25 19:51:12] 2025-05-25 17:50:51,093 | INFO     | sum of square deviations: 3212467674.5
[2025-05-25 19:51:12] 2025-05-25 17:50:51,095 | INFO     | sum of deviations: 32893390174.5
[2025-05-25 19:51:12] 2025-05-25 17:50:51,095 | INFO     | mean x: 1748188511.5
[2025-05-25 19:51:12] 2025-05-25 17:50:51,095 | INFO     | mean y: 2303260.408256881
[2025-05-25 19:51:12] 2025-05-25 17:50:51,095 | INFO     | -- intersect: -17897906993.47328
[2025-05-25 19:51:12] 2025-05-25 17:50:51,096 | INFO     | intersect: -17897906993.47328
[2025-05-25 19:51:12] 2025-05-25 17:50:51,096 | INFO     | chi2: 1.526827710636154
[2025-05-25 19:51:12] 2025-05-25 17:50:51,096 | INFO     | current chi2=1.526827710636154 (change=33.95559001130131 %)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,096 | INFO     | sum of square deviations: 2996454322.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,098 | INFO     | sum of deviations: 32027637457.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,098 | INFO     | mean x: 1748188359.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,098 | INFO     | mean y: 2302649.103286385
[2025-05-25 19:51:12] 2025-05-25 17:50:51,098 | INFO     | -- intersect: -18683229300.280376
[2025-05-25 19:51:12] 2025-05-25 17:50:51,098 | INFO     | intersect: -18683229300.280376
[2025-05-25 19:51:12] 2025-05-25 17:50:51,099 | INFO     | chi2: 1.5276020387935856
[2025-05-25 19:51:12] 2025-05-25 17:50:51,099 | INFO     | current chi2=1.5276020387935856 (change=-0.050714835212735204 %)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,099 | INFO     | right removable region: 212
[2025-05-25 19:51:12] 2025-05-25 17:50:51,099 | INFO     | sum of square deviations: 3212467674.5
[2025-05-25 19:51:12] 2025-05-25 17:50:51,101 | INFO     | sum of deviations: -12204955762.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,101 | INFO     | mean x: 1748188816.5
[2025-05-25 19:51:12] 2025-05-25 17:50:51,101 | INFO     | mean y: 2315828.8440366974
[2025-05-25 19:51:12] 2025-05-25 17:50:51,101 | INFO     | -- intersect: 6644115632.269774
[2025-05-25 19:51:12] 2025-05-25 17:50:51,101 | INFO     | intersect: 6644115632.269774
[2025-05-25 19:51:12] 2025-05-25 17:50:51,102 | INFO     | chi2: 0.8124966584154082
[2025-05-25 19:51:12] 2025-05-25 17:50:51,102 | INFO     | current chi2=0.8124966584154082 (change=64.8546708649419 %)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,102 | INFO     | sum of square deviations: 2996454322.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,104 | INFO     | sum of deviations: -9356624384.999998
[2025-05-25 19:51:12] 2025-05-25 17:50:51,104 | INFO     | mean x: 1748188969.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,104 | INFO     | mean y: 2313816.262910798
[2025-05-25 19:51:12] 2025-05-25 17:50:51,104 | INFO     | -- intersect: 5461148084.764537
[2025-05-25 19:51:12] 2025-05-25 17:50:51,104 | INFO     | intersect: 5461148084.764537
[2025-05-25 19:51:12] 2025-05-25 17:50:51,105 | INFO     | chi2: 0.806676572646761
[2025-05-25 19:51:12] 2025-05-25 17:50:51,105 | INFO     | current chi2=0.806676572646761 (change=0.7163211944770331 %)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,105 | INFO     | left removable region: 20
[2025-05-25 19:51:12] 2025-05-25 17:50:51,105 | INFO     | sum of square deviations: 2194675568.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,106 | INFO     | sum of deviations: 2906820556.0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | mean x: 1748188938.5
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | mean y: 2323891.6875
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | -- intersect: -2313130664.01001
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | intersect: -2313130664.01001
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | chi2: 0.00012565485731536795
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | -- intersect: -2313130664.01001
[2025-05-25 19:51:12] 2025-05-25 17:50:51,107 | INFO     | current memory leak: 1.32 B/s (using 192 data points, chi2=0.00)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | ..............................
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | . Timing measurements:
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | . get job = 0 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | . initial setup = 1 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | . payload setup = 25 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | . stage-in = 0 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,108 | INFO     | . payload execution = 13565 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,109 | INFO     | . stage-out = 1 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,109 | INFO     | . log creation = 0 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,109 | INFO     | ..............................
[2025-05-25 19:51:12] 2025-05-25 17:50:51,219 | INFO     | 
[2025-05-25 19:51:12] 2025-05-25 17:50:51,219 | INFO     | job summary report
[2025-05-25 19:51:12] 2025-05-25 17:50:51,219 | INFO     | --------------------------------------------------
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | PanDA job id: 6665680761
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | task id: 44871837
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | errors: (none)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | pilot state: finished 
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | transexitcode: 0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | exeerrorcode: 0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | exeerrordiag: 
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | exitcode: 0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | exitmsg: OK
[2025-05-25 19:51:12] 2025-05-25 17:50:51,220 | INFO     | cpuconsumptiontime: 50750 s
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | nevents: 400
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | neventsw: 0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | pid: 969925
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | pgrp: 969925
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | corecount: 4
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | event service: False
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | sizes: {0: 2392911, 1: 2393778, 12: 2393778, 17: 2394012, 23: 2394040, 13593: 2424724, 13595: 2433743, 13604: 2433857}
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | --------------------------------------------------
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | 
[2025-05-25 19:51:12] 2025-05-25 17:50:51,221 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-05-25 19:51:12] 2025-05-25 17:50:51,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 19:51:12] 2025-05-25 17:50:51,257 | INFO     | job 6665680761 has completed (purged errors)
[2025-05-25 19:51:12] 2025-05-25 17:50:51,257 | INFO     | overall cleanup function is called
[2025-05-25 19:51:12] 2025-05-25 17:50:52,267 | INFO     | --- collectZombieJob: --- 10, [969925]
[2025-05-25 19:51:12] 2025-05-25 17:50:52,268 | INFO     | zombie collector waiting for pid 969925
[2025-05-25 19:51:12] 2025-05-25 17:50:52,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 19:51:12] 2025-05-25 17:50:52,268 | INFO     | collected zombie processes
[2025-05-25 19:51:12] 2025-05-25 17:50:52,268 | INFO     | will attempt to kill all subprocesses of pid=969925
[2025-05-25 19:51:12] 2025-05-25 17:50:53,040 | INFO     | process IDs to be killed: [969925] (in reverse order)
[2025-05-25 19:51:12] 2025-05-25 17:50:53,344 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 19:51:12] 2025-05-25 17:50:53,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 19:51:12] 2025-05-25 17:50:53,370 | INFO     | did not find any defunct processes belonging to 969925
[2025-05-25 19:51:12] 2025-05-25 17:50:53,390 | INFO     | did not find any defunct processes belonging to 969925
[2025-05-25 19:51:12] 2025-05-25 17:50:53,390 | INFO     | ready for new job
[2025-05-25 19:51:12] 2025-05-25 17:50:53,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 19:51:12] 2025-05-25 17:50:53,393 | INFO     | **************************************
[2025-05-25 19:51:12] 2025-05-25 17:50:53,393 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 19:51:12] 2025-05-25 17:50:53,394 | INFO     | **************************************
[2025-05-25 19:51:12] 2025-05-25 17:50:53,394 | INFO     | 
[2025-05-25 19:51:12] 2025-05-25 17:50:53,403 | INFO     | architecture information:
[2025-05-25 19:51:12] 2025-05-25 17:50:53,403 | INFO     | executing command: cat /etc/os-release
[2025-05-25 19:51:12] 2025-05-25 17:50:53,427 | INFO     | cat /etc/os-release:
[2025-05-25 19:51:12] NAME="CentOS Linux"
[2025-05-25 19:51:12] VERSION="7 (Core)"
[2025-05-25 19:51:12] ID="centos"
[2025-05-25 19:51:12] ID_LIKE="rhel fedora"
[2025-05-25 19:51:12] VERSION_ID="7"
[2025-05-25 19:51:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 19:51:12] ANSI_COLOR="0;31"
[2025-05-25 19:51:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 19:51:12] HOME_URL="https://www.centos.org/"
[2025-05-25 19:51:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 19:51:12] 
[2025-05-25 19:51:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 19:51:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 19:51:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 19:51:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 19:51:12] 
[2025-05-25 19:51:12] 2025-05-25 17:50:53,428 | INFO     | **************************************
[2025-05-25 19:51:12] 2025-05-25 17:50:53,932 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-05-25 19:51:12] 2025-05-25 17:50:53,964 | INFO     | sufficient remaining disk space (3299368501248 B)
[2025-05-25 19:51:12] 2025-05-25 17:50:53,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 19:51:12] 2025-05-25 17:50:53,965 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 19:51:12] 2025-05-25 17:50:53,965 | INFO     | update_server=False
[2025-05-25 19:51:12] 2025-05-25 17:50:53,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 19:51:12] 2025-05-25 17:50:53,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:51:12] 2025-05-25 17:50:53,966 | INFO     | aborting loop
[2025-05-25 19:51:12] 2025-05-25 17:50:54,137 | INFO     | all payload control threads have been joined
[2025-05-25 19:51:12] 2025-05-25 17:50:54,441 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 19:51:12] 2025-05-25 17:50:54,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 19:51:12] 2025-05-25 17:50:54,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 19:51:12] 2025-05-25 17:50:54,516 | INFO     | all data control threads have been joined
[2025-05-25 19:51:12] 2025-05-25 17:50:54,970 | INFO     | [job] retrieve thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:54,971 | INFO     | [job] job monitor thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:54,989 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:55,142 | INFO     | [payload] control thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:55,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 19:51:12] 2025-05-25 17:50:55,232 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:55,235 | INFO     | [payload] failed_post thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:55,332 | INFO     | all job control threads have been joined
[2025-05-25 19:51:12] 2025-05-25 17:50:55,521 | INFO     | [data] control thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:56,063 | INFO     | [job] validate thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:56,207 | INFO     | [payload] validate_post thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:56,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 19:51:12] 2025-05-25 17:50:56,326 | INFO     | [data] copytool_in thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:56,336 | INFO     | [job] control thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:56,458 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:57,225 | INFO     | [data] copytool_out thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:57,242 | INFO     | [job] queue monitor thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:50:57,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 19:51:12] 2025-05-25 17:51:01,463 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:51:04,257 | INFO     | job.realtimelogging is not enabled
[2025-05-25 19:51:12] 2025-05-25 17:51:05,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 19:51:12] 2025-05-25 17:51:06,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23238861993792)>', '<ExcThread(monitor, started 23238631462656)>']
[2025-05-25 19:51:12] 2025-05-25 17:51:07,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 19:51:12] 2025-05-25 17:51:07,498 | INFO     | [monitor] control thread has ended
[2025-05-25 19:51:12] 2025-05-25 17:51:11,719 | INFO     | all workflow threads have been joined
[2025-05-25 19:51:12] 2025-05-25 17:51:11,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 19:51:12] 2025-05-25 17:51:11,720 | INFO     | traces error code: 0
[2025-05-25 19:51:12] 2025-05-25 17:51:11,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 19:51:12] 2025-05-25 17:51:11,869 [wrapper] ==== pilot stdout END ====
[2025-05-25 19:51:12] 2025-05-25 17:51:11,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 19:51:12] 2025-05-25 17:51:11,878 [wrapper] pilotpid: 955748
[2025-05-25 19:51:12] 2025-05-25 17:51:11,881 [wrapper] Pilot exit status: 0
[2025-05-25 19:51:12] 2025-05-25 17:51:11,899 [wrapper] pandaids: 6665680761 6665680761
[2025-05-25 19:51:12] 2025-05-25 17:51:12,048 [wrapper] cleanup supervisor_pilot 2175544 955749
[2025-05-25 19:51:12] 2025-05-25 17:51:12,053 [wrapper] Test setup, not cleaning
[2025-05-25 19:51:12] 2025-05-25 17:51:12,056 [wrapper] apfmon messages muted
[2025-05-25 19:51:12] 2025-05-25 17:51:12,060 [wrapper] ==== wrapper stdout END ====
[2025-05-25 19:51:12] 2025-05-25 17:51:12,063 [wrapper] ==== wrapper stderr END ====
[2025-05-25 19:51:12]  *** Error codes and diagnostics ***
[2025-05-25 19:51:12]     "exeErrorCode": 0,
[2025-05-25 19:51:12]     "exeErrorDiag": "",
[2025-05-25 19:51:12]     "pilotErrorCode": 0,
[2025-05-25 19:51:12]     "pilotErrorDiag": "",
[2025-05-25 19:51:12]  *** Listing of results directory ***
[2025-05-25 19:51:12] total 640676
[2025-05-25 19:51:12] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc    495897 May 24 23:20 pilot3.tar.gz
[2025-05-25 19:51:12] -rwx------ 1 boinc boinc     37140 May 24 23:26 runpilot2-wrapper.sh
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc      5111 May 24 23:27 queuedata.json
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc       100 May 25 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 19:51:12] -rwxr-xr-x 1 boinc boinc      7986 May 25 15:31 run_atlas
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc       105 May 25 15:31 job.xml
[2025-05-25 19:51:12] -rw-r--r-- 3 boinc boinc 225324930 May 25 15:31 EVNT.44871834._000973.pool.root.1
[2025-05-25 19:51:12] -rw-r--r-- 3 boinc boinc 225324930 May 25 15:31 ATLAS.root_0
[2025-05-25 19:51:12] -rw-r--r-- 2 boinc boinc     15093 May 25 15:31 start_atlas.sh
[2025-05-25 19:51:12] drwxrwx--x 2 boinc boinc      4096 May 25 15:31 shared
[2025-05-25 19:51:12] -rw-r--r-- 2 boinc boinc    508878 May 25 15:31 input.tar.gz
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc         0 May 25 15:31 boinc_lockfile
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc      2558 May 25 16:03 pandaJob.out
[2025-05-25 19:51:12] -rw------- 1 boinc boinc    990811 May 25 16:03 agis_schedconf.cvmfs.json
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc      6680 May 25 16:32 init_data.xml
[2025-05-25 19:51:12] -rw------- 1 boinc boinc 198433604 May 25 19:50 HITS.44871837._024407.pool.root.1
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc       531 May 25 19:50 boinc_task_state.xml
[2025-05-25 19:51:12] -rw------- 1 boinc boinc        97 May 25 19:50 pilot_heartbeat.json
[2025-05-25 19:51:12] -rw------- 1 boinc boinc      1027 May 25 19:50 memory_monitor_summary.json
[2025-05-25 19:51:12] -rw------- 1 boinc boinc   1596740 May 25 19:50 agis_ddmendpoints.agis.ALL.json
[2025-05-25 19:51:12] -rw------- 1 boinc boinc    327916 May 25 19:50 log.44871837._024407.job.log.tgz.1
[2025-05-25 19:51:12] -rw------- 1 boinc boinc      7711 May 25 19:50 heartbeat.json
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc        28 May 25 19:51 wrapper_checkpoint.txt
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc      8192 May 25 19:51 boinc_mmap_file
[2025-05-25 19:51:12] -rw------- 1 boinc boinc      4436 May 25 19:51 pilotlog.txt
[2025-05-25 19:51:12] -rw------- 1 boinc boinc   1236228 May 25 19:51 log.44871837._024407.job.log.1
[2025-05-25 19:51:12] -rw------- 1 boinc boinc       357 May 25 19:51 output.list
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc       620 May 25 19:51 runtime_log
[2025-05-25 19:51:12] -rw------- 1 boinc boinc   1587200 May 25 19:51 result.tar.gz
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc      9103 May 25 19:51 runtime_log.err
[2025-05-25 19:51:12] -rw------- 1 boinc boinc       791 May 25 19:51 7OBLDmaZBd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcONKDm36HzJo.diag
[2025-05-25 19:51:12] -rw-r--r-- 1 boinc boinc     22490 May 25 19:51 stderr.txt
[2025-05-25 19:51:12] HITS file was successfully produced:
[2025-05-25 19:51:12] -rw------- 1 boinc boinc 198433604 May 25 19:50 shared/HITS.pool.root.1
[2025-05-25 19:51:12]  *** Contents of shared directory: ***
[2025-05-25 19:51:12] total 415904
[2025-05-25 19:51:12] -rw-r--r-- 3 boinc boinc 225324930 May 25 15:31 ATLAS.root_0
[2025-05-25 19:51:12] -rw-r--r-- 2 boinc boinc     15093 May 25 15:31 start_atlas.sh
[2025-05-25 19:51:12] -rw-r--r-- 2 boinc boinc    508878 May 25 15:31 input.tar.gz
[2025-05-25 19:51:12] -rw------- 1 boinc boinc 198433604 May 25 19:50 HITS.pool.root.1
[2025-05-25 19:51:12] -rw------- 1 boinc boinc   1587200 May 25 19:51 result.tar.gz
19:51:13 (951559): run_atlas exited; CPU time 51532.870360
19:51:13 (951559): called boinc_finish(0)

</stderr_txt>
]]>

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