Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:45:31 (15888): wrapper (7.7.26015): starting
22:45:31 (15888): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 22:45:31] Arguments: --nthreads 8
[2025-05-24 22:45:31] Threads: 8
[2025-05-24 22:45:31] Checking for CVMFS
[2025-05-24 22:45:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 22:45:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 22:45:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 22:45:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 22:45:33] 2.11.2.0 5200 13800 170064 146387 0 651 16952077 18432000 21348 130560 0 80636412 99.271 115418982 51215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 22:45:33] CVMFS is ok
[2025-05-24 22:45:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 22:45:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 22:45:33] Further information can be found at the LHC@home message board.
[2025-05-24 22:45:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 22:45:33] Checking for apptainer binary...
[2025-05-24 22:45:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 22:45:33] Running /usr/bin/apptainer --version
[2025-05-24 22:45:33] apptainer version 1.3.2-1.el7
[2025-05-24 22:45:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 22:45:38] c-212-7.aglt2.org
[2025-05-24 22:45:38] apptainer works
[2025-05-24 22:45:38] Set ATHENA_PROC_NUMBER=8
[2025-05-24 22:45:38] Set ATHENA_CORE_NUMBER=8
[2025-05-24 22:45:38] Starting ATLAS job with PandaID=6665683408
[2025-05-24 22:45:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 04:03:34]  *** The last 200 lines of the pilot log: ***
[2025-05-25 04:03:34] 2025-05-25 08:03:16,726 | INFO     | -- intersect: -25946701014.589375
[2025-05-25 04:03:34] 2025-05-25 08:03:16,726 | INFO     | intersect: -25946701014.589375
[2025-05-25 04:03:34] 2025-05-25 08:03:16,726 | INFO     | chi2: 3.907539041687739
[2025-05-25 04:03:34] 2025-05-25 08:03:16,727 | INFO     | sum of square deviations: 8540767325.0861
[2025-05-25 04:03:34] 2025-05-25 08:03:16,729 | INFO     | sum of deviations: 130391562430.35757
[2025-05-25 04:03:34] 2025-05-25 08:03:16,729 | INFO     | mean x: 1748150628.5894039
[2025-05-25 04:03:34] 2025-05-25 08:03:16,729 | INFO     | mean y: 2438077.486754967
[2025-05-25 04:03:34] 2025-05-25 08:03:16,729 | INFO     | -- intersect: -26686509548.54943
[2025-05-25 04:03:34] 2025-05-25 08:03:16,729 | INFO     | intersect: -26686509548.54943
[2025-05-25 04:03:34] 2025-05-25 08:03:16,730 | INFO     | chi2: 3.909553275929397
[2025-05-25 04:03:34] 2025-05-25 08:03:16,730 | INFO     | current chi2=3.909553275929397 (change=-0.051547386223633106 %)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,730 | INFO     | right removable region: 301
[2025-05-25 04:03:34] 2025-05-25 08:03:16,730 | INFO     | sum of square deviations: 8540750855.086106
[2025-05-25 04:03:34] 2025-05-25 08:03:16,732 | INFO     | sum of deviations: 39499222611.072845
[2025-05-25 04:03:34] 2025-05-25 08:03:16,732 | INFO     | mean x: 1748150933.5894039
[2025-05-25 04:03:34] 2025-05-25 08:03:16,733 | INFO     | mean y: 2472124.9602649007
[2025-05-25 04:03:34] 2025-05-25 08:03:16,733 | INFO     | -- intersect: -8082367727.554848
[2025-05-25 04:03:34] 2025-05-25 08:03:16,733 | INFO     | intersect: -8082367727.554848
[2025-05-25 04:03:34] 2025-05-25 08:03:16,733 | INFO     | chi2: 0.22844704568900664
[2025-05-25 04:03:34] 2025-05-25 08:03:16,733 | INFO     | current chi2=0.22844704568900664 (change=94.15368488320117 %)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,733 | INFO     | sum of square deviations: 8123516192.545481
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | sum of deviations: 17287355641.18182
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | mean x: 1748151086.090909
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | mean y: 2480219.2525252528
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | -- intersect: -3717695727.1564846
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | intersect: -3717695727.1564846
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | chi2: 0.03100476482257465
[2025-05-25 04:03:34] 2025-05-25 08:03:16,736 | INFO     | current chi2=0.03100476482257465 (change=86.42802986177263 %)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,737 | INFO     | sum of square deviations: 7720095742.503413
[2025-05-25 04:03:34] 2025-05-25 08:03:16,739 | INFO     | sum of deviations: 10342174854.623287
[2025-05-25 04:03:34] 2025-05-25 08:03:16,739 | INFO     | mean x: 1748151238.5924656
[2025-05-25 04:03:34] 2025-05-25 08:03:16,739 | INFO     | mean y: 2482825.828767123
[2025-05-25 04:03:34] 2025-05-25 08:03:16,739 | INFO     | -- intersect: -2339416340.3060317
[2025-05-25 04:03:34] 2025-05-25 08:03:16,739 | INFO     | intersect: -2339416340.3060317
[2025-05-25 04:03:34] 2025-05-25 08:03:16,740 | INFO     | chi2: 0.001131611736464267
[2025-05-25 04:03:34] 2025-05-25 08:03:16,740 | INFO     | current chi2=0.001131611736464267 (change=96.35020054839978 %)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,740 | INFO     | sum of square deviations: 7330256942.459939
[2025-05-25 04:03:34] 2025-05-25 08:03:16,742 | INFO     | sum of deviations: 9769890020.759579
[2025-05-25 04:03:34] 2025-05-25 08:03:16,742 | INFO     | mean x: 1748151391.0940766
[2025-05-25 04:03:34] 2025-05-25 08:03:16,742 | INFO     | mean y: 2483048.56445993
[2025-05-25 04:03:34] 2025-05-25 08:03:16,742 | INFO     | -- intersect: -2327482594.4809833
[2025-05-25 04:03:34] 2025-05-25 08:03:16,742 | INFO     | intersect: -2327482594.4809833
[2025-05-25 04:03:34] 2025-05-25 08:03:16,743 | INFO     | chi2: 0.0010887622871069286
[2025-05-25 04:03:34] 2025-05-25 08:03:16,743 | INFO     | current chi2=0.0010887622871069286 (change=3.786585802938204 %)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,743 | INFO     | left removable region: 40
[2025-05-25 04:03:34] 2025-05-25 08:03:16,743 | INFO     | sum of square deviations: 5513054008.605368
[2025-05-25 04:03:34] 2025-05-25 08:03:16,745 | INFO     | sum of deviations: 7577539463.693494
[2025-05-25 04:03:34] 2025-05-25 08:03:16,745 | INFO     | mean x: 1748151818.0957854
[2025-05-25 04:03:34] 2025-05-25 08:03:16,745 | INFO     | mean y: 2483418.8122605365
[2025-05-25 04:03:34] 2025-05-25 08:03:16,745 | INFO     | -- intersect: -2400302653.929179
[2025-05-25 04:03:34] 2025-05-25 08:03:16,745 | INFO     | intersect: -2400302653.929179
[2025-05-25 04:03:34] 2025-05-25 08:03:16,746 | INFO     | chi2: 0.00019700372637086234
[2025-05-25 04:03:34] 2025-05-25 08:03:16,746 | INFO     | -- intersect: -2400302653.929179
[2025-05-25 04:03:34] 2025-05-25 08:03:16,746 | INFO     | current memory leak: 1.37 B/s (using 261 data points, chi2=0.00)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | ..............................
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . Timing measurements:
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . get job = 0 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . initial setup = 3 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . payload setup = 90 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . stage-in = 0 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . payload execution = 18777 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . stage-out = 2 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | . log creation = 0 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,747 | INFO     | ..............................
[2025-05-25 04:03:34] 2025-05-25 08:03:16,838 | INFO     | 
[2025-05-25 04:03:34] 2025-05-25 08:03:16,838 | INFO     | job summary report
[2025-05-25 04:03:34] 2025-05-25 08:03:16,838 | INFO     | --------------------------------------------------
[2025-05-25 04:03:34] 2025-05-25 08:03:16,838 | INFO     | PanDA job id: 6665683408
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | task id: 44871837
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | errors: (none)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | pilot state: finished 
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | transexitcode: 0
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | exeerrorcode: 0
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | exeerrordiag: 
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | exitcode: 0
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | exitmsg: OK
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | cpuconsumptiontime: 43699 s
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | nevents: 400
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | neventsw: 0
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | pid: 58075
[2025-05-25 04:03:34] 2025-05-25 08:03:16,839 | INFO     | pgrp: 58075
[2025-05-25 04:03:34] 2025-05-25 08:03:16,840 | INFO     | corecount: 8
[2025-05-25 04:03:34] 2025-05-25 08:03:16,840 | INFO     | event service: False
[2025-05-25 04:03:34] 2025-05-25 08:03:16,840 | INFO     | sizes: {0: 2393514, 1: 2393769, 12: 2393769, 23: 2393797, 33: 2393825, 35: 2394087, 44: 2394243, 18871: 2426908, 18872: 2426907, 18875: 2435904, 18876: 2435960, 18
[2025-05-25 04:03:34] 2025-05-25 08:03:16,840 | INFO     | --------------------------------------------------
[2025-05-25 04:03:34] 2025-05-25 08:03:16,840 | INFO     | 
[2025-05-25 04:03:34] 2025-05-25 08:03:16,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-25 04:03:34] 2025-05-25 08:03:16,864 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,864 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,866 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 04:03:34] 2025-05-25 08:03:16,866 | INFO     | job 6665683408 has completed (purged errors)
[2025-05-25 04:03:34] 2025-05-25 08:03:16,866 | INFO     | overall cleanup function is called
[2025-05-25 04:03:34] 2025-05-25 08:03:17,876 | INFO     | --- collectZombieJob: --- 10, [58075]
[2025-05-25 04:03:34] 2025-05-25 08:03:17,877 | INFO     | zombie collector waiting for pid 58075
[2025-05-25 04:03:34] 2025-05-25 08:03:17,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 04:03:34] 2025-05-25 08:03:17,877 | INFO     | collected zombie processes
[2025-05-25 04:03:34] 2025-05-25 08:03:17,877 | INFO     | will attempt to kill all subprocesses of pid=58075
[2025-05-25 04:03:34] 2025-05-25 08:03:18,111 | INFO     | PID=29547 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-25 04:03:34] 2025-05-25 08:03:18,111 | INFO     | .. there are 21 such processes running
[2025-05-25 04:03:34] 2025-05-25 08:03:18,288 | INFO     | process IDs to be killed: [58075] (in reverse order)
[2025-05-25 04:03:34] 2025-05-25 08:03:18,588 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 04:03:34] 2025-05-25 08:03:18,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 04:03:34] 2025-05-25 08:03:18,604 | INFO     | did not find any defunct processes belonging to 58075
[2025-05-25 04:03:34] 2025-05-25 08:03:18,622 | INFO     | did not find any defunct processes belonging to 58075
[2025-05-25 04:03:34] 2025-05-25 08:03:18,622 | INFO     | ready for new job
[2025-05-25 04:03:34] 2025-05-25 08:03:18,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 04:03:34] 2025-05-25 08:03:18,624 | INFO     | **************************************
[2025-05-25 04:03:34] 2025-05-25 08:03:18,624 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 04:03:34] 2025-05-25 08:03:18,624 | INFO     | **************************************
[2025-05-25 04:03:34] 2025-05-25 08:03:18,624 | INFO     | 
[2025-05-25 04:03:34] 2025-05-25 08:03:18,629 | INFO     | architecture information:
[2025-05-25 04:03:34] 2025-05-25 08:03:18,629 | INFO     | executing command: cat /etc/os-release
[2025-05-25 04:03:34] 2025-05-25 08:03:18,643 | INFO     | cat /etc/os-release:
[2025-05-25 04:03:34] NAME="CentOS Linux"
[2025-05-25 04:03:34] VERSION="7 (Core)"
[2025-05-25 04:03:34] ID="centos"
[2025-05-25 04:03:34] ID_LIKE="rhel fedora"
[2025-05-25 04:03:34] VERSION_ID="7"
[2025-05-25 04:03:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 04:03:34] ANSI_COLOR="0;31"
[2025-05-25 04:03:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 04:03:34] HOME_URL="https://www.centos.org/"
[2025-05-25 04:03:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 04:03:34] 
[2025-05-25 04:03:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 04:03:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 04:03:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 04:03:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 04:03:34] 
[2025-05-25 04:03:34] 2025-05-25 08:03:18,643 | INFO     | **************************************
[2025-05-25 04:03:34] 2025-05-25 08:03:19,145 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-25 04:03:34] 2025-05-25 08:03:19,234 | INFO     | sufficient remaining disk space (103305707520 B)
[2025-05-25 04:03:34] 2025-05-25 08:03:19,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 04:03:34] 2025-05-25 08:03:19,235 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 04:03:34] 2025-05-25 08:03:19,235 | INFO     | update_server=False
[2025-05-25 04:03:34] 2025-05-25 08:03:19,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 04:03:34] 2025-05-25 08:03:19,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 04:03:34] 2025-05-25 08:03:19,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 04:03:34] 2025-05-25 08:03:19,578 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 04:03:34] 2025-05-25 08:03:19,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 04:03:34] 2025-05-25 08:03:19,579 | INFO     | will abort loop
[2025-05-25 04:03:34] 2025-05-25 08:03:19,708 | INFO     | all payload control threads have been joined
[2025-05-25 04:03:34] 2025-05-25 08:03:19,858 | INFO     | all data control threads have been joined
[2025-05-25 04:03:34] 2025-05-25 08:03:20,117 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 04:03:34] 2025-05-25 08:03:20,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 04:03:34] 2025-05-25 08:03:20,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 04:03:34] 2025-05-25 08:03:20,241 | INFO     | [job] retrieve thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,268 | INFO     | [data] copytool_in thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,583 | INFO     | [job] job monitor thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,714 | INFO     | [payload] control thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,731 | INFO     | [payload] failed_post thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,732 | INFO     | all job control threads have been joined
[2025-05-25 04:03:34] 2025-05-25 08:03:20,741 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,864 | INFO     | [data] control thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:20,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,243 | INFO     | [data] copytool_out thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,350 | INFO     | [job] validate thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,380 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,384 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,712 | INFO     | [payload] validate_post thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,738 | INFO     | [job] control thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:21,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 04:03:34] 2025-05-25 08:03:21,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 04:03:34] 2025-05-25 08:03:22,858 | INFO     | [job] queue monitor thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:25,806 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 04:03:34] 2025-05-25 08:03:26,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601226463040)>', '<ExcThread(monitor, started 140600644986624)>']
[2025-05-25 04:03:34] 2025-05-25 08:03:27,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 04:03:34] 2025-05-25 08:03:27,158 | INFO     | [monitor] control thread has ended
[2025-05-25 04:03:34] 2025-05-25 08:03:31,772 | INFO     | all workflow threads have been joined
[2025-05-25 04:03:34] 2025-05-25 08:03:31,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 04:03:34] 2025-05-25 08:03:31,773 | INFO     | traces error code: 0
[2025-05-25 04:03:34] 2025-05-25 08:03:31,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 04:03:34] 2025-05-25 08:03:32,050 [wrapper] ==== pilot stdout END ====
[2025-05-25 04:03:34] 2025-05-25 08:03:32,064 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 04:03:34] 2025-05-25 08:03:32,110 [wrapper] pilotpid: 29547
[2025-05-25 04:03:34] 2025-05-25 08:03:32,158 [wrapper] Pilot exit status: 0
[2025-05-25 04:03:34] 2025-05-25 08:03:32,322 [wrapper] pandaids: 6665683408
[2025-05-25 04:03:34] 2025-05-25 08:03:32,806 [wrapper] cleanup supervisor_pilot 28670 29548
[2025-05-25 04:03:34] 2025-05-25 08:03:32,834 [wrapper] Test setup, not cleaning
[2025-05-25 04:03:34] 2025-05-25 08:03:32,875 [wrapper] apfmon messages muted
[2025-05-25 04:03:34] 2025-05-25 08:03:32,924 [wrapper] ==== wrapper stdout END ====
[2025-05-25 04:03:34] 2025-05-25 08:03:32,955 [wrapper] ==== wrapper stderr END ====
[2025-05-25 04:03:34]  *** Error codes and diagnostics ***
[2025-05-25 04:03:34]     "exeErrorCode": 0,
[2025-05-25 04:03:34]     "exeErrorDiag": "",
[2025-05-25 04:03:34]     "pilotErrorCode": 0,
[2025-05-25 04:03:34]     "pilotErrorDiag": "",
[2025-05-25 04:03:34]  *** Listing of results directory ***
[2025-05-25 04:03:34] total 417216
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas    495897 May 24 19:44 pilot3.tar.gz
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas      5111 May 24 19:55 queuedata.json
[2025-05-25 04:03:34] -rwx------ 1 boincer umatlas     37140 May 24 19:56 runpilot2-wrapper.sh
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas       100 May 24 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 04:03:34] -rwxr-xr-x 1 boincer umatlas      7986 May 24 22:45 run_atlas
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas       105 May 24 22:45 job.xml
[2025-05-25 04:03:34] -rw-r--r-- 2 boincer umatlas 227315387 May 24 22:45 EVNT.44871834._001037.pool.root.1
[2025-05-25 04:03:34] drwxrwx--x 2 boincer umatlas      4096 May 24 22:45 shared
[2025-05-25 04:03:34] -rw-r--r-- 2 boincer umatlas    508878 May 24 22:45 input.tar.gz
[2025-05-25 04:03:34] -rw-r--r-- 2 boincer umatlas     15093 May 24 22:45 start_atlas.sh
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas         0 May 24 22:45 boinc_lockfile
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas      2559 May 24 22:45 pandaJob.out
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas    990803 May 24 22:46 agis_schedconf.cvmfs.json
[2025-05-25 04:03:34] drwx------ 4 boincer umatlas      4096 May 24 22:46 pilot3
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas      6386 May 25 03:54 init_data.xml
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas 192048170 May 25 04:01 HITS.44871837._026003.pool.root.1
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas       531 May 25 04:01 boinc_task_state.xml
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas      1074 May 25 04:02 memory_monitor_summary.json
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas   1596740 May 25 04:02 agis_ddmendpoints.agis.ALL.json
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas    429376 May 25 04:02 log.44871837._026003.job.log.tgz.1
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas        95 May 25 04:02 pilot_heartbeat.json
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas      7741 May 25 04:03 heartbeat.json
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas      8192 May 25 04:03 boinc_mmap_file
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas        28 May 25 04:03 wrapper_checkpoint.txt
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas      4540 May 25 04:03 pilotlog.txt
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas   1585891 May 25 04:03 log.44871837._026003.job.log.1
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas       357 May 25 04:03 output.list
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas       620 May 25 04:03 runtime_log
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas   2037760 May 25 04:03 result.tar.gz
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas       661 May 25 04:03 TBWMDmguDd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEtSKDm0ceZ4n.diag
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas      8655 May 25 04:03 runtime_log.err
[2025-05-25 04:03:34] -rw-r--r-- 1 boincer umatlas     21022 May 25 04:03 stderr.txt
[2025-05-25 04:03:34] HITS file was successfully produced:
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas 192048170 May 25 04:01 shared/HITS.pool.root.1
[2025-05-25 04:03:34]  *** Contents of shared directory: ***
[2025-05-25 04:03:34] total 412052
[2025-05-25 04:03:34] -rw-r--r-- 2 boincer umatlas 227315387 May 24 22:45 ATLAS.root_0
[2025-05-25 04:03:34] -rw-r--r-- 2 boincer umatlas    508878 May 24 22:45 input.tar.gz
[2025-05-25 04:03:34] -rw-r--r-- 2 boincer umatlas     15093 May 24 22:45 start_atlas.sh
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas 192048170 May 25 04:01 HITS.pool.root.1
[2025-05-25 04:03:34] -rw------- 1 boincer umatlas   2037760 May 25 04:03 result.tar.gz
04:03:36 (15888): run_atlas exited; CPU time 43287.643075
04:03:36 (15888): called boinc_finish(0)

</stderr_txt>
]]>

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