Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:52 (398781): wrapper (7.7.26015): starting
19:47:52 (398781): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 19:47:52] Arguments: --nthreads 8
[2025-05-24 19:47:52] Threads: 8
[2025-05-24 19:47:52] Checking for CVMFS
[2025-05-24 19:47:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 19:47:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 19:47:52] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 19:47:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 19:47:52] 2.11.3.0 38739 385337 242972 146387 2 463 40581320 45568000 14701 130560 0 1815664227 99.752 1533566998 21464 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-05-24 19:47:52] CVMFS is ok
[2025-05-24 19:47:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 19:47:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 19:47:52] Further information can be found at the LHC@home message board.
[2025-05-24 19:47:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 19:47:52] Checking for apptainer binary...
[2025-05-24 19:47:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 19:47:52] Running /usr/bin/apptainer --version
[2025-05-24 19:47:52] apptainer version 1.3.3-1.el9
[2025-05-24 19:47:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 19:47:53] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0013.triumf.lcg
[2025-05-24 19:47:53] apptainer works
[2025-05-24 19:47:53] Set ATHENA_PROC_NUMBER=8
[2025-05-24 19:47:53] Set ATHENA_CORE_NUMBER=8
[2025-05-24 19:47:53] Starting ATLAS job with PandaID=6665683294
[2025-05-24 19:47:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:52:41]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | WARNING  | wrong length of table data, x=[1748141376.0], y=[1692.0] (must be same and length>=4)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | ..............................
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . Timing measurements:
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . get job = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . initial setup = 5 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . payload setup = 28 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . stage-in = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . payload execution = 47 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . stage-out = 1 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . log creation = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | ..............................
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665683294/pilotlog.txt
[2025-05-24 19:52:41] 2025-05-25 02:52:27,674 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 19:52:41] - Log from pilotlog.txt -
[2025-05-24 19:52:41] 2025-05-25 02:52:27,655 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 19:52:41] 2025-05-25 02:52:27,656 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665683294/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,656 | INFO     | extracted standard info from prmon json
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | WARNING  | wrong length of table data, x=[1748141376.0], y=[1692.0] (must be same and length>=4)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | ..............................
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . Timing measurements:
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . get job = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . initial setup = 5 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . payload setup = 28 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . stage-in = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . payload execution = 47 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . stage-out = 1 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . log creation = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | ..............................
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665683294/pilotlog.txt
[2025-05-24 19:52:41] 2025-05-25 02:52:27,674 | WARNING  | 
[2025-05-24 19:52:41] [begin log extracts]
[2025-05-24 19:52:41] - Log from pilotlog.txt -
[2025-05-24 19:52:41] 2025-05-25 02:52:27,655 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 19:52:41] 2025-05-25 02:52:27,656 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665683294/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,656 | INFO     | extracted standard info from prmon json
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:52:41] 2025-05-25 02:52:27,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | WARNING  | wrong length of table data, x=[1748141376.0], y=[1692.0] (must be same and length>=4)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | ..............................
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . Timing measurements:
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . get job = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,658 | INFO     | . initial setup = 5 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . payload setup = 28 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . stage-in = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . payload execution = 47 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . stage-out = 1 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | . log creation = 0 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | ..............................
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 19:52:41] 2025-05-25 02:52:27,659 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665683294/pilotlog.txt
[2025-05-24 19:52:41] [end log extracts]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,675 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,675 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | 
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | job summary report
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | --------------------------------------------------
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | PanDA job id: 6665683294
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | task id: 44871837
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 19:50:07,126 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | pilot state: failed 
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | transexitcode: 65
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | exeerrorcode: 65
[2025-05-24 19:52:41] 2025-05-25 02:52:27,754 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | exitcode: 65
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | cpuconsumptiontime: 17 s
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | nevents: 0
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | neventsw: 0
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | pid: 420320
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | pgrp: 420320
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | corecount: 8
[2025-05-24 19:52:41] 2025-05-25 02:52:27,755 | INFO     | event service: False
[2025-05-24 19:52:41] 2025-05-25 02:52:27,756 | INFO     | sizes: {0: 2392913, 1: 2393766, 2: 2393766, 12: 2393794, 17: 2394028, 23: 2394056, 80: 2417476, 81: 2421739, 211: 2421853}
[2025-05-24 19:52:41] 2025-05-25 02:52:27,756 | INFO     | --------------------------------------------------
[2025-05-24 19:52:41] 2025-05-25 02:52:27,756 | INFO     | 
[2025-05-24 19:52:41] 2025-05-25 02:52:27,756 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 19:52:41] 2025-05-25 02:52:27,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:52:41] 2025-05-25 02:52:27,771 | INFO     | job 6665683294 has completed (purged errors)
[2025-05-24 19:52:41] 2025-05-25 02:52:27,771 | INFO     | overall cleanup function is called
[2025-05-24 19:52:41] 2025-05-25 02:52:28,728 | INFO     | PID=406970 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 19:52:41] 2025-05-25 02:52:28,728 | INFO     | .. there are 26 such processes running
[2025-05-24 19:52:41] 2025-05-25 02:52:28,782 | INFO     | --- collectZombieJob: --- 10, [420320]
[2025-05-24 19:52:41] 2025-05-25 02:52:28,782 | INFO     | zombie collector waiting for pid 420320
[2025-05-24 19:52:41] 2025-05-25 02:52:28,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:52:41] 2025-05-25 02:52:28,783 | INFO     | collected zombie processes
[2025-05-24 19:52:41] 2025-05-25 02:52:28,783 | INFO     | will attempt to kill all subprocesses of pid=420320
[2025-05-24 19:52:41] 2025-05-25 02:52:29,050 | INFO     | process IDs to be killed: [420320] (in reverse order)
[2025-05-24 19:52:41] 2025-05-25 02:52:29,222 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:52:41] 2025-05-25 02:52:29,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:52:41] 2025-05-25 02:52:29,231 | INFO     | did not find any defunct processes belonging to 420320
[2025-05-24 19:52:41] 2025-05-25 02:52:29,239 | INFO     | did not find any defunct processes belonging to 420320
[2025-05-24 19:52:41] 2025-05-25 02:52:29,239 | INFO     | ready for new job
[2025-05-24 19:52:41] 2025-05-25 02:52:29,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:52:41] 2025-05-25 02:52:29,241 | INFO     | **************************************
[2025-05-24 19:52:41] 2025-05-25 02:52:29,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:52:41] 2025-05-25 02:52:29,241 | INFO     | **************************************
[2025-05-24 19:52:41] 2025-05-25 02:52:29,241 | INFO     | 
[2025-05-24 19:52:41] 2025-05-25 02:52:29,255 | INFO     | architecture information:
[2025-05-24 19:52:41] 2025-05-25 02:52:29,255 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:52:41] 2025-05-25 02:52:29,345 | INFO     | cat /etc/os-release:
[2025-05-24 19:52:41] NAME="CentOS Linux"
[2025-05-24 19:52:41] VERSION="7 (Core)"
[2025-05-24 19:52:41] ID="centos"
[2025-05-24 19:52:41] ID_LIKE="rhel fedora"
[2025-05-24 19:52:41] VERSION_ID="7"
[2025-05-24 19:52:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:52:41] ANSI_COLOR="0;31"
[2025-05-24 19:52:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:52:41] HOME_URL="https://www.centos.org/"
[2025-05-24 19:52:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:52:41] 
[2025-05-24 19:52:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:52:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:52:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:52:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:52:41] 
[2025-05-24 19:52:41] 2025-05-25 02:52:29,346 | INFO     | **************************************
[2025-05-24 19:52:41] 2025-05-25 02:52:29,734 | INFO     | 257s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-24 19:52:41] 2025-05-25 02:52:29,849 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 19:52:41] 2025-05-25 02:52:29,913 | INFO     | sufficient remaining disk space (1357645873152 B)
[2025-05-24 19:52:41] 2025-05-25 02:52:29,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:52:41] 2025-05-25 02:52:29,914 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:52:41] 2025-05-25 02:52:29,914 | INFO     | update_server=False
[2025-05-24 19:52:41] 2025-05-25 02:52:29,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:52:41] 2025-05-25 02:52:29,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:52:41] 2025-05-25 02:52:29,914 | INFO     | aborting loop
[2025-05-24 19:52:41] 2025-05-25 02:52:29,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:52:41] 2025-05-25 02:52:30,505 | INFO     | all data control threads have been joined
[2025-05-24 19:52:41] 2025-05-25 02:52:30,607 | INFO     | all payload control threads have been joined
[2025-05-24 19:52:41] 2025-05-25 02:52:30,739 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:52:41] 2025-05-25 02:52:30,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:52:41] 2025-05-25 02:52:30,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:52:41] 2025-05-25 02:52:30,920 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:30,921 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:30,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:52:41] 2025-05-25 02:52:31,067 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,071 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,283 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,492 | INFO     | all job control threads have been joined
[2025-05-24 19:52:41] 2025-05-25 02:52:31,512 | INFO     | [data] control thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,532 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,613 | INFO     | [payload] control thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,625 | INFO     | [job] validate thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,739 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:31,922 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:32,064 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:32,114 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:32,498 | INFO     | [job] control thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:32,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:52:41] 2025-05-25 02:52:33,776 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:34,974 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:52:41] 2025-05-25 02:52:35,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413592282944)>', '<ExcThread(monitor, started 140413050533632)>']
[2025-05-24 19:52:41] 2025-05-25 02:52:35,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:52:41] 2025-05-25 02:52:35,787 | INFO     | [monitor] control thread has ended
[2025-05-24 19:52:41] 2025-05-25 02:52:40,652 | INFO     | all workflow threads have been joined
[2025-05-24 19:52:41] 2025-05-25 02:52:40,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:52:41] 2025-05-25 02:52:40,653 | INFO     | traces error code: 0
[2025-05-24 19:52:41] 2025-05-25 02:52:40,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:52:41] 2025-05-25 02:52:40,777 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:52:41] 2025-05-25 02:52:40,783 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:52:41] 2025-05-25 02:52:40,791 [wrapper] pilotpid: 406970
[2025-05-24 19:52:41] 2025-05-25 02:52:40,793 [wrapper] Pilot exit status: 0
[2025-05-24 19:52:41] 2025-05-25 02:52:40,966 [wrapper] pandaids: 6665683294
[2025-05-24 19:52:41] 2025-05-25 02:52:41,227 [wrapper] cleanup supervisor_pilot  406985 406971
[2025-05-24 19:52:41] 2025-05-25 02:52:41,272 [wrapper] Test setup, not cleaning
[2025-05-24 19:52:41] 2025-05-25 02:52:41,282 [wrapper] apfmon messages muted
[2025-05-24 19:52:41] 2025-05-25 02:52:41,302 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:52:41] 2025-05-25 02:52:41,326 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:52:41]  *** Error codes and diagnostics ***
[2025-05-24 19:52:41]     "exeErrorCode": 65,
[2025-05-24 19:52:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 19:52:41]     "pilotErrorCode": 1305,
[2025-05-24 19:52:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 19:52:41]  *** Listing of results directory ***
[2025-05-24 19:52:41] total 222088
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc    495897 May 24 16:44 pilot3.tar.gz
[2025-05-24 19:52:41] -rwx------. 1 boinc boinc     37140 May 24 16:49 runpilot2-wrapper.sh
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc      5111 May 24 16:49 queuedata.json
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc       100 May 24 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:52:41] -rwxr-xr-x. 1 boinc boinc      7986 May 24 19:47 run_atlas
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc       105 May 24 19:47 job.xml
[2025-05-24 19:52:41] -rw-r--r--. 2 boinc boinc 223386174 May 24 19:47 EVNT.44871834._001032.pool.root.1
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc      6454 May 24 19:47 init_data.xml
[2025-05-24 19:52:41] -rw-r--r--. 2 boinc boinc     15093 May 24 19:47 start_atlas.sh
[2025-05-24 19:52:41] drwxrwx--x. 2 boinc boinc      4096 May 24 19:47 shared
[2025-05-24 19:52:41] -rw-r--r--. 2 boinc boinc    508876 May 24 19:47 input.tar.gz
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc         0 May 24 19:47 boinc_lockfile
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc      2559 May 24 19:47 pandaJob.out
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc    990803 May 24 19:48 agis_schedconf.cvmfs.json
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc   1596740 May 24 19:48 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:52:41] drwx------. 4 boinc boinc      4096 May 24 19:48 pilot3
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc       524 May 24 19:50 boinc_task_state.xml
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc       978 May 24 19:50 memory_monitor_summary.json
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc     21416 May 24 19:50 log.44871837._025889.job.log.tgz.1
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc        95 May 24 19:52 pilot_heartbeat.json
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc      8347 May 24 19:52 heartbeat.json
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc        22 May 24 19:52 wrapper_checkpoint.txt
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc      4466 May 24 19:52 pilotlog.txt
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc     79137 May 24 19:52 log.44871837._025889.job.log.1
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc       188 May 24 19:52 output.list
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc       620 May 24 19:52 runtime_log
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc    122880 May 24 19:52 result.tar.gz
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc      8192 May 24 19:52 boinc_mmap_file
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc      8647 May 24 19:52 runtime_log.err
[2025-05-24 19:52:41] -rw-------. 1 boinc boinc       645 May 24 19:52 NStNDmnnDd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDZNKDmlTiZYm.diag
[2025-05-24 19:52:41] -rw-r--r--. 1 boinc boinc     21905 May 24 19:52 stderr.txt
[2025-05-24 19:52:42] No HITS result produced
[2025-05-24 19:52:42]  *** Contents of shared directory: ***
[2025-05-24 19:52:42] total 218788
[2025-05-24 19:52:42] -rw-r--r--. 2 boinc boinc 223386174 May 24 19:47 ATLAS.root_0
[2025-05-24 19:52:42] -rw-r--r--. 2 boinc boinc     15093 May 24 19:47 start_atlas.sh
[2025-05-24 19:52:42] -rw-r--r--. 2 boinc boinc    508876 May 24 19:47 input.tar.gz
[2025-05-24 19:52:42] -rw-------. 1 boinc boinc    122880 May 24 19:52 result.tar.gz
19:52:43 (398781): run_atlas exited; CPU time 25.610898
19:52:43 (398781): called boinc_finish(0)

</stderr_txt>
]]>

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