Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 23:09:15 (2094774): Detected: vboxwrapper 26206
2025-05-24 23:09:15 (2094774): Detected: BOINC client v8.0.2
2025-05-24 23:09:16 (2094774): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-05-24 23:09:16 (2094774): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 23:09:16 (2094774): Create VM. (boinc_089e6afd5c9649ae, slot#0)
2025-05-24 23:09:16 (2094774): Setting Memory Size for VM. (4800MB)
2025-05-24 23:09:16 (2094774): Setting CPU Count for VM. (8)
2025-05-24 23:09:17 (2094774): Setting Chipset Options for VM.
2025-05-24 23:09:17 (2094774): Setting Graphics Controller Options for VM.
2025-05-24 23:09:17 (2094774): Setting Boot Options for VM.
2025-05-24 23:09:17 (2094774): Setting Network Configuration for NAT.
2025-05-24 23:09:17 (2094774): Enabling VM Network Access.
2025-05-24 23:09:17 (2094774): Disabling USB Support for VM.
2025-05-24 23:09:17 (2094774): Disabling COM Port Support for VM.
2025-05-24 23:09:17 (2094774): Disabling LPT Port Support for VM.
2025-05-24 23:09:17 (2094774): Disabling Audio Support for VM.
2025-05-24 23:09:18 (2094774): Disabling Clipboard Support for VM.
2025-05-24 23:09:18 (2094774): Disabling Drag and Drop Support for VM.
2025-05-24 23:09:18 (2094774): Adding storage controller(s) to VM.
2025-05-24 23:09:18 (2094774): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 23:09:18 (2094774): Adding VirtualBox Guest Additions to VM.
2025-05-24 23:09:18 (2094774): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 23:09:18 (2094774): forwarding host port 52811 to guest port 80
2025-05-24 23:09:18 (2094774): Enabling remote desktop for VM.
2025-05-24 23:09:18 (2094774): Enabling shared directory for VM.
2025-05-24 23:09:19 (2094774): Starting VM using VBoxManage interface. (boinc_089e6afd5c9649ae, slot#0)
2025-05-24 23:09:20 (2094774): Successfully started VM. (PID = '2095361')
2025-05-24 23:09:20 (2094774): Reporting VM Process ID to BOINC.
2025-05-24 23:09:20 (2094774): Guest Log: BIOS: VirtualBox 7.0.22
2025-05-24 23:09:20 (2094774): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 23:09:20 (2094774): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 23:09:20 (2094774): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 23:09:20 (2094774): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 23:09:20 (2094774): Detected: Web Application Enabled (http://localhost:52811)
2025-05-24 23:09:20 (2094774): Detected: Remote Desktop Enabled (localhost:52831)
2025-05-24 23:09:21 (2094774): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 23:09:38 (2094774): Preference change detected
2025-05-24 23:09:38 (2094774): Setting CPU throttle for VM. (60%)
2025-05-24 23:09:38 (2094774): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 23:09:39 (2094774): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 23:09:40 (2094774): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 23:09:40 (2094774): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 23:09:43 (2094774): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 23:09:43 (2094774): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 23:09:43 (2094774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 23:09:51 (2094774): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 23:09:51 (2094774): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 23:09:58 (2094774): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000135 main     Log opened 2025-05-25T03:09:39.181303000Z
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000216 main     OS Product: Linux
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000235 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000255 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000269 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000270 main     Process ID: 1367
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.000270 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 23:09:58 (2094774): Guest Log: 00:00:00.001041 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 23:09:58 (2094774): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 23:09:58 (2094774): Guest Log: [INFO] Mounting shared directory
2025-05-24 23:09:58 (2094774): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 23:10:04 (2094774): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 23:10:04 (2094774): Guest Log: [INFO] Detected branch: prod
2025-05-24 23:10:04 (2094774): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 23:10:04 (2094774): Guest Log: Copying input files
2025-05-24 23:10:06 (2094774): Guest Log: Copied input files into RunAtlas.
2025-05-24 23:10:06 (2094774): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 23:10:06 (2094774): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 23:10:06 (2094774): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 23:10:06 (2094774): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 23:10:14 (2094774): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 23:10:14 (2094774): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 23:10:14 (2094774): Guest Log: 2.6.3.0 1644 0 30180 146388 3 1 3117617 4096000 0 65024 1 0 n/a 1 1 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 23:10:15 (2094774): Guest Log: copied the webapp to /var/www
2025-05-24 23:10:15 (2094774): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 23:10:15 (2094774): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 23:10:15 (2094774): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 23:10:15 (2094774): Guest Log:  *** Starting ATLAS job. (PandaID=6665679135 taskID=44871837) ***
2025-05-24 23:10:19 (2094774): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 23:10:39 (2094774): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 23:10:59 (2094774): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 23:11:20 (2094774): VM state change detected. (old = 'paused', new = 'running')
2025-05-25 00:49:21 (2094774): Status Report: Elapsed Time: '6000.000000'
2025-05-25 00:49:21 (2094774): Status Report: CPU Time: '25749.200000'
2025-05-25 00:56:07 (2094774): VM state change detected. (old = 'running', new = 'paused')
2025-05-25 00:56:27 (2094774): VM state change detected. (old = 'paused', new = 'running')
2025-05-25 01:17:52 (2094774): VM state change detected. (old = 'running', new = 'paused')
2025-05-25 01:18:13 (2094774): VM state change detected. (old = 'paused', new = 'running')
2025-05-25 01:22:44 (2094774): VM state change detected. (old = 'running', new = 'paused')
2025-05-25 01:23:04 (2094774): VM state change detected. (old = 'paused', new = 'running')
2025-05-25 01:50:34 (2094774): Guest Log:  *** Job finished ***
2025-05-25 01:50:34 (2094774): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:29,511 | INFO     | [data] queue_monitor thread has finished
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:32,129 | INFO     | job.realtimelogging is not enabled
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:33,134 | INFO     | [payload] run_realtimelog thread has finished
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:33,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458267256640)>', '<ExcThread(monitor, started 140457661142784)>']
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:34,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:34,140 | INFO     | [monitor] control thread has ended
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,747 | INFO     | all workflow threads have been joined
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,747 | INFO     | end of generic workflow (traces error code: 0)
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,747 | INFO     | traces error code: 0
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,814 [wrapper] ==== pilot stdout END ====
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,818 [wrapper] ==== wrapper stdout RESUME ====
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,821 [wrapper] pilotpid: 5993
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:38,824 [wrapper] Pilot exit status: 0
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:39,000 [wrapper] pandaids: 6665679135
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:39,025 [wrapper] cleanup supervisor_pilot  7325 5994
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:39,028 [wrapper] Test setup, not cleaning
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:39,031 [wrapper] apfmon messages muted
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:39,034 [wrapper] ==== wrapper stdout END ====
2025-05-25 01:50:34 (2094774): Guest Log: 2025-05-25 05:48:39,037 [wrapper] ==== wrapper stderr END ====
2025-05-25 01:50:34 (2094774): Guest Log:  *** Error codes and diagnostics ***
2025-05-25 01:50:34 (2094774): Guest Log:     "exeErrorCode": 0,
2025-05-25 01:50:34 (2094774): Guest Log:     "exeErrorDiag": "",
2025-05-25 01:50:34 (2094774): Guest Log:     "pilotErrorCode": 0,
2025-05-25 01:50:34 (2094774): Guest Log:     "pilotErrorDiag": "",
2025-05-25 01:50:34 (2094774): Guest Log:  *** Listing of results directory ***
2025-05-25 01:50:34 (2094774): Guest Log: total 200364
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 19:53 pilot3.tar.gz
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 20:15 queuedata.json
2025-05-25 01:50:34 (2094774): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 20:17 runpilot2-wrapper.sh
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas    508877 May 25 03:09 input.tar.gz
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas     15093 May 25 03:09 start_atlas.sh
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas      6643 May 25 03:09 init_data.xml
2025-05-25 01:50:34 (2094774): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 25 03:09 EVNT.44871834._000931.pool.root.1 -> /data/./ATLAS.root_0
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 25 03:09 pandaJob.out
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas    990803 May 25 03:10 agis_schedconf.cvmfs.json
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas   1596740 May 25 03:10 agis_ddmendpoints.agis.ALL.json
2025-05-25 01:50:34 (2094774): Guest Log: drwx------. 4 atlas atlas      4096 May 25 03:10 pilot3
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas 199300433 May 25 05:47 HITS.44871837._023358.pool.root.1
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas      1024 May 25 05:48 memory_monitor_summary.json
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas        95 May 25 05:48 pilot_heartbeat.json
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas    333584 May 25 05:48 log.44871837._023358.job.log.tgz.1
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas      7701 May 25 05:48 heartbeat.json
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas      4485 May 25 05:48 pilotlog.txt
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas    721235 May 25 05:48 log.44871837._023358.job.log.1
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas       357 May 25 05:48 output.list
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 05:48 runtime_log
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas   1075200 May 25 05:48 result.tar.gz
2025-05-25 01:50:34 (2094774): Guest Log: -rw-r--r--. 1 atlas atlas      8622 May 25 05:48 runtime_log.err
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas       663 May 25 05:48 0tKMDmxTAd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhTSKDm7rlDzn.diag
2025-05-25 01:50:34 (2094774): Guest Log: Looking for outputfile HITS.44871837._023358.pool.root.1
2025-05-25 01:50:34 (2094774): Guest Log: HITS file was successfully produced
2025-05-25 01:50:34 (2094774): Guest Log: -rw-------. 1 atlas atlas 199300433 May 25 05:47 /home/atlas/RunAtlas/HITS.44871837._023358.pool.root.1
2025-05-25 01:50:34 (2094774): Guest Log: Successfully finished the ATLAS job!
2025-05-25 01:50:34 (2094774): Guest Log: Copying the results back to the shared directory!
2025-05-25 01:50:34 (2094774): Guest Log:  *** Contents of shared directory: ***
2025-05-25 01:50:35 (2094774): Guest Log: total 222004
2025-05-25 01:50:35 (2094774): Guest Log: -rw-r--r--. 1 root root 225716848 May 25 03:09 ATLAS.root_0
2025-05-25 01:50:35 (2094774): Guest Log: -rw-r--r--. 1 root root      6643 May 25 03:09 init_data.xml
2025-05-25 01:50:35 (2094774): Guest Log: -rw-r--r--. 1 root root    508877 May 25 03:09 input.tar.gz
2025-05-25 01:50:35 (2094774): Guest Log: -rw-r--r--. 1 root root   1075200 May 25  2025 result.tar.gz
2025-05-25 01:50:35 (2094774): Guest Log: -rw-r--r--. 1 root root     15093 May 25 03:09 start_atlas.sh
2025-05-25 01:50:35 (2094774): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-25 01:50:35 (2094774): VM Completion File Detected.
2025-05-25 01:50:35 (2094774): Powering off VM.
2025-05-25 01:50:36 (2094774): Successfully stopped VM.
2025-05-25 01:50:36 (2094774): Deregistering VM. (boinc_089e6afd5c9649ae, slot#0)
2025-05-25 01:50:36 (2094774): Removing network bandwidth throttle group from VM.
2025-05-25 01:50:37 (2094774): Removing VM from VirtualBox.
01:50:42 (2094774): called boinc_finish(0)

</stderr_txt>
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