Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:20:17 (1388214): wrapper (7.7.26015): starting
22:20:17 (1388214): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 22:20:17] Arguments: --nthreads 8
[2025-05-24 22:20:17] Threads: 8
[2025-05-24 22:20:17] Checking for CVMFS
[2025-05-24 22:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 22:20:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 22:20:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 22:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 22:20:20] 2.12.6.0 267692 9463 153712 146387 1 66 24118385 40960000 41927 16776704 0 103288051 99.779 69228659 38447 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 22:20:20] CVMFS is ok
[2025-05-24 22:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 22:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 22:20:20] Further information can be found at the LHC@home message board.
[2025-05-24 22:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 22:20:20] Checking for apptainer binary...
[2025-05-24 22:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 22:20:20] Running /usr/bin/apptainer --version
[2025-05-24 22:20:20] apptainer version 1.4.1-1.el9
[2025-05-24 22:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 22:20:21] c8-16-1.aglt2.org
[2025-05-24 22:20:21] apptainer works
[2025-05-24 22:20:21] Set ATHENA_PROC_NUMBER=8
[2025-05-24 22:20:21] Set ATHENA_CORE_NUMBER=8
[2025-05-24 22:20:21] Starting ATLAS job with PandaID=6665679342
[2025-05-24 22:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 00:38:40]  *** The last 200 lines of the pilot log: ***
[2025-05-25 00:38:40] 2025-05-25 04:38:22,813 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6665679342/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,813 | INFO     | extracted standard info from prmon json
[2025-05-25 00:38:40] 2025-05-25 04:38:22,813 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 00:38:40] 2025-05-25 04:38:22,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 00:38:40] 2025-05-25 04:38:22,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 00:38:40] 2025-05-25 04:38:22,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 00:38:40] 2025-05-25 04:38:22,815 | INFO     | fitting pss+swap vs Time
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | sum of square deviations: 681190217.7307714
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | sum of deviations: 14602322722.153849
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | mean x: 1748143913.5769231
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | mean y: 2466088.3846153845
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | -- intersect: -37471591709.826965
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | intersect: -37471591709.826965
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | chi2: 5.747003007570644
[2025-05-25 00:38:40] 2025-05-25 04:38:22,816 | INFO     | sum of square deviations: 605573245.2
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | sum of deviations: 23063857649.08001
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | mean x: 1748143761.08
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | mean y: 2482617.392
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | -- intersect: -66577306326.8182
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | intersect: -66577306326.8182
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | chi2: 5.040192528594966
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | current chi2=5.040192528594966 (change=12.298766470881986 %)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | right removable region: 124
[2025-05-25 00:38:40] 2025-05-25 04:38:22,817 | INFO     | sum of square deviations: 605567145.2
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | sum of deviations: -26382998439.440002
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | mean x: 1748144066.08
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | mean y: 2548455.744
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | -- intersect: 76164676029.67722
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | intersect: 76164676029.67722
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | chi2: 1.5435023565647392
[2025-05-25 00:38:40] 2025-05-25 04:38:22,818 | INFO     | current chi2=1.5435023565647392 (change=73.14248218538512 %)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,819 | INFO     | sum of square deviations: 535758135.16666526
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | sum of deviations: -37244072370.58335
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | mean x: 1748144218.5833333
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | mean y: 2571872.5083333333
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | -- intersect: 121527576380.14973
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | intersect: 121527576380.14973
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | chi2: 1.0371972530348863
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | current chi2=1.0371972530348863 (change=32.802353775260784 %)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | sum of square deviations: 471544897.4434775
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | sum of deviations: -37583785991.13043
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | mean x: 1748144371.0695653
[2025-05-25 00:38:40] 2025-05-25 04:38:22,820 | INFO     | mean y: 2572565.3913043477
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | -- intersect: 139335824351.35367
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | intersect: 139335824351.35367
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | chi2: 0.9917914722706329
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | current chi2=0.9917914722706329 (change=4.377738239413382 %)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | left removable region: 30
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | sum of square deviations: 257512701.1170212
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | sum of deviations: -15035571755.542553
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | mean x: 1748144645.56383
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | mean y: 2555906.840425532
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | -- intersect: 102072683490.55948
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | intersect: 102072683490.55948
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | chi2: 0.14711950876194116
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | -- intersect: 102072683490.55948
[2025-05-25 00:38:40] 2025-05-25 04:38:22,821 | INFO     | current memory leak: -58.39 B/s (using 94 data points, chi2=0.15)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | ..............................
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . Timing measurements:
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . get job = 0 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . initial setup = 11 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . payload setup = 96 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . stage-in = 0 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . payload execution = 7933 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . stage-out = 1 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | . log creation = 0 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,822 | INFO     | ..............................
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | 
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | job summary report
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | --------------------------------------------------
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | PanDA job id: 6665679342
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | task id: 44871837
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | errors: (none)
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | pilot state: finished 
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | transexitcode: 0
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | exeerrorcode: 0
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | exeerrordiag: 
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | exitcode: 0
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | exitmsg: OK
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | cpuconsumptiontime: 28977 s
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | nevents: 400
[2025-05-25 00:38:40] 2025-05-25 04:38:22,888 | INFO     | neventsw: 0
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | pid: 1606554
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | pgrp: 1606554
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | corecount: 8
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | event service: False
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | sizes: {0: 2393512, 1: 2393596, 2: 2393795, 13: 2393795, 24: 2393851, 35: 2393879, 45: 2394035, 52: 2394269, 56: 2394297, 8034: 2421749, 8037: 2430690, 8039: 24310
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | --------------------------------------------------
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | 
[2025-05-25 00:38:40] 2025-05-25 04:38:22,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 00:38:40] 2025-05-25 04:38:23,005 | INFO     | job 6665679342 has completed (purged errors)
[2025-05-25 00:38:40] 2025-05-25 04:38:23,006 | INFO     | overall cleanup function is called
[2025-05-25 00:38:40] 2025-05-25 04:38:24,024 | INFO     | --- collectZombieJob: --- 10, [1606554]
[2025-05-25 00:38:40] 2025-05-25 04:38:24,025 | INFO     | zombie collector waiting for pid 1606554
[2025-05-25 00:38:40] 2025-05-25 04:38:24,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 00:38:40] 2025-05-25 04:38:24,025 | INFO     | collected zombie processes
[2025-05-25 00:38:40] 2025-05-25 04:38:24,025 | INFO     | will attempt to kill all subprocesses of pid=1606554
[2025-05-25 00:38:40] 2025-05-25 04:38:25,413 | INFO     | process IDs to be killed: [1606554] (in reverse order)
[2025-05-25 00:38:40] 2025-05-25 04:38:25,669 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 00:38:40] 2025-05-25 04:38:25,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 00:38:40] 2025-05-25 04:38:25,742 | INFO     | did not find any defunct processes belonging to 1606554
[2025-05-25 00:38:40] 2025-05-25 04:38:25,774 | INFO     | did not find any defunct processes belonging to 1606554
[2025-05-25 00:38:40] 2025-05-25 04:38:25,774 | INFO     | ready for new job
[2025-05-25 00:38:40] 2025-05-25 04:38:25,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 00:38:40] 2025-05-25 04:38:25,775 | INFO     | **************************************
[2025-05-25 00:38:40] 2025-05-25 04:38:25,775 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 00:38:40] 2025-05-25 04:38:25,775 | INFO     | **************************************
[2025-05-25 00:38:40] 2025-05-25 04:38:25,775 | INFO     | 
[2025-05-25 00:38:40] 2025-05-25 04:38:25,793 | INFO     | architecture information:
[2025-05-25 00:38:40] 2025-05-25 04:38:25,794 | INFO     | executing command: cat /etc/os-release
[2025-05-25 00:38:40] 2025-05-25 04:38:25,881 | INFO     | cat /etc/os-release:
[2025-05-25 00:38:40] NAME="CentOS Linux"
[2025-05-25 00:38:40] VERSION="7 (Core)"
[2025-05-25 00:38:40] ID="centos"
[2025-05-25 00:38:40] ID_LIKE="rhel fedora"
[2025-05-25 00:38:40] VERSION_ID="7"
[2025-05-25 00:38:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 00:38:40] ANSI_COLOR="0;31"
[2025-05-25 00:38:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 00:38:40] HOME_URL="https://www.centos.org/"
[2025-05-25 00:38:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 00:38:40] 
[2025-05-25 00:38:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 00:38:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 00:38:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 00:38:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 00:38:40] 
[2025-05-25 00:38:40] 2025-05-25 04:38:25,882 | INFO     | **************************************
[2025-05-25 00:38:40] 2025-05-25 04:38:26,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-05-25 00:38:40] 2025-05-25 04:38:26,465 | INFO     | sufficient remaining disk space (169940615168 B)
[2025-05-25 00:38:40] 2025-05-25 04:38:26,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 00:38:40] 2025-05-25 04:38:26,466 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 00:38:40] 2025-05-25 04:38:26,466 | INFO     | update_server=False
[2025-05-25 00:38:40] 2025-05-25 04:38:26,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 00:38:40] 2025-05-25 04:38:26,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 00:38:40] 2025-05-25 04:38:26,467 | INFO     | aborting loop
[2025-05-25 00:38:40] 2025-05-25 04:38:26,468 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 00:38:40] 2025-05-25 04:38:26,469 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 00:38:40] 2025-05-25 04:38:26,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 00:38:40] 2025-05-25 04:38:26,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 00:38:40] 2025-05-25 04:38:26,956 | INFO     | all job control threads have been joined
[2025-05-25 00:38:40] 2025-05-25 04:38:27,026 | INFO     | all payload control threads have been joined
[2025-05-25 00:38:40] 2025-05-25 04:38:27,259 | INFO     | all data control threads have been joined
[2025-05-25 00:38:40] 2025-05-25 04:38:27,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 00:38:40] 2025-05-25 04:38:27,471 | INFO     | [job] retrieve thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:27,472 | INFO     | [job] job monitor thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:27,746 | INFO     | [job] validate thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:27,830 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:27,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 00:38:40] 2025-05-25 04:38:27,962 | INFO     | [job] control thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,032 | INFO     | [payload] control thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,281 | INFO     | [data] control thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,320 | INFO     | [payload] failed_post thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,475 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,820 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,908 | INFO     | [job] queue monitor thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,944 | INFO     | [payload] validate_post thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,972 | INFO     | [data] copytool_in thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:28,973 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:29,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 00:38:40] 2025-05-25 04:38:29,495 | INFO     | [data] copytool_out thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:33,011 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 00:38:40] 2025-05-25 04:38:34,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956455692096)>', '<ExcThread(monitor, started 139955519084288)>']
[2025-05-25 00:38:40] 2025-05-25 04:38:34,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 00:38:40] 2025-05-25 04:38:34,531 | INFO     | [monitor] control thread has ended
[2025-05-25 00:38:40] 2025-05-25 04:38:39,285 | INFO     | all workflow threads have been joined
[2025-05-25 00:38:40] 2025-05-25 04:38:39,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 00:38:40] 2025-05-25 04:38:39,286 | INFO     | traces error code: 0
[2025-05-25 00:38:40] 2025-05-25 04:38:39,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 00:38:40] 2025-05-25 04:38:39,431 [wrapper] ==== pilot stdout END ====
[2025-05-25 00:38:40] 2025-05-25 04:38:39,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 00:38:40] 2025-05-25 04:38:39,463 [wrapper] pilotpid: 1425118
[2025-05-25 00:38:40] 2025-05-25 04:38:39,470 [wrapper] Pilot exit status: 0
[2025-05-25 00:38:40] 2025-05-25 04:38:39,605 [wrapper] pandaids: 6665679342
[2025-05-25 00:38:40] 2025-05-25 04:38:39,852 [wrapper] cleanup supervisor_pilot 1596594 1425119
[2025-05-25 00:38:40] 2025-05-25 04:38:39,897 [wrapper] Test setup, not cleaning
[2025-05-25 00:38:40] 2025-05-25 04:38:39,902 [wrapper] apfmon messages muted
[2025-05-25 00:38:40] 2025-05-25 04:38:39,931 [wrapper] ==== wrapper stdout END ====
[2025-05-25 00:38:40] 2025-05-25 04:38:39,970 [wrapper] ==== wrapper stderr END ====
[2025-05-25 00:38:40]  *** Error codes and diagnostics ***
[2025-05-25 00:38:40]     "exeErrorCode": 0,
[2025-05-25 00:38:40]     "exeErrorDiag": "",
[2025-05-25 00:38:40]     "pilotErrorCode": 0,
[2025-05-25 00:38:40]     "pilotErrorDiag": "",
[2025-05-25 00:38:40]  *** Listing of results directory ***
[2025-05-25 00:38:40] total 417920
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas    495897 May 24 15:53 pilot3.tar.gz
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas      5111 May 24 16:29 queuedata.json
[2025-05-25 00:38:40] -rwx------. 1 boincer umatlas     37140 May 24 16:30 runpilot2-wrapper.sh
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas       100 May 24 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 00:38:40] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 22:20 run_atlas
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas       105 May 24 22:20 job.xml
[2025-05-25 00:38:40] -rw-r--r--. 2 boincer umatlas 222181945 May 24 22:20 EVNT.44871834._000939.pool.root.1
[2025-05-25 00:38:40] -rw-r--r--. 2 boincer umatlas     15093 May 24 22:20 start_atlas.sh
[2025-05-25 00:38:40] drwxrwx--x. 2 boincer umatlas      4096 May 24 22:20 shared
[2025-05-25 00:38:40] -rw-r--r--. 2 boincer umatlas    508877 May 24 22:20 input.tar.gz
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas         0 May 24 22:20 boinc_lockfile
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas      2558 May 24 22:20 pandaJob.out
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas    990803 May 24 22:21 agis_schedconf.cvmfs.json
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas   1596740 May 24 22:21 agis_ddmendpoints.agis.ALL.json
[2025-05-25 00:38:40] drwx------. 4 boincer umatlas      4096 May 24 22:22 pilot3
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas 199986513 May 25 00:36 HITS.44871837._023554.pool.root.1
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas       530 May 25 00:36 boinc_task_state.xml
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas      1036 May 25 00:37 memory_monitor_summary.json
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas    324173 May 25 00:37 log.44871837._023554.job.log.tgz.1
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas        95 May 25 00:38 pilot_heartbeat.json
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas      7161 May 25 00:38 init_data.xml
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas      7699 May 25 00:38 heartbeat.json
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas        27 May 25 00:38 wrapper_checkpoint.txt
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas      4477 May 25 00:38 pilotlog.txt
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas    647881 May 25 00:38 log.44871837._023554.job.log.1
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas       357 May 25 00:38 output.list
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas       620 May 25 00:38 runtime_log
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas    993280 May 25 00:38 result.tar.gz
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas      8192 May 25 00:38 boinc_mmap_file
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas      8654 May 25 00:38 runtime_log.err
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas       651 May 25 00:38 qAoLDmrgAd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhWSKDmaDQyMn.diag
[2025-05-25 00:38:40] -rw-r--r--. 1 boincer umatlas     20958 May 25 00:38 stderr.txt
[2025-05-25 00:38:40] HITS file was successfully produced:
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas 199986513 May 25 00:36 shared/HITS.pool.root.1
[2025-05-25 00:38:40]  *** Contents of shared directory: ***
[2025-05-25 00:38:40] total 413772
[2025-05-25 00:38:40] -rw-r--r--. 2 boincer umatlas 222181945 May 24 22:20 ATLAS.root_0
[2025-05-25 00:38:40] -rw-r--r--. 2 boincer umatlas     15093 May 24 22:20 start_atlas.sh
[2025-05-25 00:38:40] -rw-r--r--. 2 boincer umatlas    508877 May 24 22:20 input.tar.gz
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas 199986513 May 25 00:36 HITS.pool.root.1
[2025-05-25 00:38:40] -rw-------. 1 boincer umatlas    993280 May 25 00:38 result.tar.gz
00:38:42 (1388214): run_atlas exited; CPU time 29234.643940
00:38:42 (1388214): called boinc_finish(0)

</stderr_txt>
]]>

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