Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:11:46 (32024): wrapper (7.7.26015): starting
22:11:46 (32024): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 22:11:46] Arguments: --nthreads 12
[2025-05-24 22:11:46] Threads: 12
[2025-05-24 22:11:46] Checking for CVMFS
[2025-05-24 22:11:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 22:11:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 22:11:46] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 22:11:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 22:11:47] 2.11.2.0 3035 20619 78996 146386 3 55 16881514 20275200 1 130560 0 5933771 99.969 3523179 11498 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 22:11:47] CVMFS is ok
[2025-05-24 22:11:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 22:11:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 22:11:47] Further information can be found at the LHC@home message board.
[2025-05-24 22:11:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 22:11:47] Checking for apptainer binary...
[2025-05-24 22:11:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 22:11:47] Running /usr/bin/apptainer --version
[2025-05-24 22:11:47] apptainer version 1.3.2-1.el7
[2025-05-24 22:11:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 22:11:48] c-205-31.aglt2.org
[2025-05-24 22:11:48] apptainer works
[2025-05-24 22:11:48] Set ATHENA_PROC_NUMBER=12
[2025-05-24 22:11:48] Set ATHENA_CORE_NUMBER=12
[2025-05-24 22:11:48] Starting ATLAS job with PandaID=6665679126
[2025-05-24 22:11:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 23:51:00]  *** The last 200 lines of the pilot log: ***
[2025-05-24 23:51:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-24 23:51:00]  is_altstaged=None
[2025-05-24 23:51:00]  is_tar=False
[2025-05-24 23:51:00]  lfn=log.44871837._023349.job.log.tgz.1
[2025-05-24 23:51:00]  mtime=0
[2025-05-24 23:51:00]  protocol_id=None
[2025-05-24 23:51:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-24 23:51:00]  replicas=None
[2025-05-24 23:51:00]  scope=mc23_13p6TeV
[2025-05-24 23:51:00]  status=None
[2025-05-24 23:51:00]  status_code=0
[2025-05-24 23:51:00]  storage_token=
[2025-05-24 23:51:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665679126/log.44871837._023349.job.log.tgz.1
[2025-05-24 23:51:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/c7/log.44871837._023349.job.log.tgz.1
[2025-05-24 23:51:00]  workdir=None
[2025-05-24 23:51:00] ]
[2025-05-24 23:51:00] 2025-05-25 03:50:33,947 | INFO     | transferring file log.44871837._023349.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665679126/log.44871837._023349.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-05-24 23:51:00] 2025-05-25 03:50:33,947 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665679126/log.44871837._023349.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._023349.job
[2025-05-24 23:51:00] 2025-05-25 03:50:33,970 | INFO     | adding to output.list: log.44871837._023349.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/c7/log.44871837._023349.job.log.tg
[2025-05-24 23:51:00] 2025-05-25 03:50:33,971 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-24 23:51:00] 2025-05-25 03:50:33,971 | INFO     | summary of transferred files:
[2025-05-24 23:51:00] 2025-05-25 03:50:33,971 | INFO     |  -- lfn=log.44871837._023349.job.log.tgz.1, status_code=0, status=transferred
[2025-05-24 23:51:00] 2025-05-25 03:50:33,971 | INFO     | stage-out finished correctly
[2025-05-24 23:51:00] 2025-05-25 03:50:36,335 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-24 23:51:00] 2025-05-25 03:50:36,420 | INFO     | job 6665679126 has state=finished
[2025-05-24 23:51:00] 2025-05-25 03:50:36,421 | INFO     | preparing for final server update for job 6665679126 in state='finished'
[2025-05-24 23:51:00] 2025-05-25 03:50:36,421 | INFO     | this job has now completed (state=finished)
[2025-05-24 23:51:00] 2025-05-25 03:50:36,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-24 23:51:00] 2025-05-25 03:50:36,421 | INFO     | log transfer has been attempted: DONE
[2025-05-24 23:51:00] 2025-05-25 03:50:36,421 | INFO     | job 6665679126 has finished - writing final server update
[2025-05-24 23:51:00] 2025-05-25 03:50:36,422 | INFO     | total number of processed events: 400 (read)
[2025-05-24 23:51:00] 2025-05-25 03:50:36,423 | INFO     | executing command: lscpu
[2025-05-24 23:51:00] 2025-05-25 03:50:36,450 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-24 23:51:00] 2025-05-25 03:50:36,717 | WARNING  | process 9845 can no longer be monitored (due to stat problems) - aborting
[2025-05-24 23:51:00] 2025-05-25 03:50:36,717 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665679126/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 23:51:00] 2025-05-25 03:50:36,805 | INFO     | number of running child processes to parent process 9845: 1
[2025-05-24 23:51:00] 2025-05-25 03:50:36,805 | INFO     | maximum number of monitored processes: 6
[2025-05-24 23:51:00] 2025-05-25 03:50:39,308 | INFO     | monitor loop #440: job 0:6665679126 is in state 'finished'
[2025-05-24 23:51:00] 2025-05-25 03:50:39,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 23:51:00] 2025-05-25 03:50:41,105 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-24 23:51:00] 2025-05-25 03:50:41,105 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665679126/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 23:51:00] 2025-05-25 03:50:41,106 | INFO     | extracted standard info from prmon json
[2025-05-24 23:51:00] 2025-05-25 03:50:41,106 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 23:51:00] 2025-05-25 03:50:41,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 23:51:00] 2025-05-25 03:50:41,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 23:51:00] 2025-05-25 03:50:41,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 23:51:00] 2025-05-25 03:50:41,110 | INFO     | fitting pss+swap vs Time
[2025-05-24 23:51:00] 2025-05-25 03:50:41,110 | INFO     | sum of square deviations: 226022842.5
[2025-05-24 23:51:00] 2025-05-25 03:50:41,111 | INFO     | sum of deviations: -2412990969.0000005
[2025-05-24 23:51:00] 2025-05-25 03:50:41,111 | INFO     | mean x: 1748142172.5
[2025-05-24 23:51:00] 2025-05-25 03:50:41,111 | INFO     | mean y: 2733334.4444444445
[2025-05-24 23:51:00] 2025-05-25 03:50:41,111 | INFO     | -- intersect: 18665675664.136368
[2025-05-24 23:51:00] 2025-05-25 03:50:41,112 | INFO     | intersect: 18665675664.136368
[2025-05-24 23:51:00] 2025-05-25 03:50:41,112 | INFO     | chi2: 0.01296278093802003
[2025-05-24 23:51:00] 2025-05-25 03:50:41,112 | INFO     | -- intersect: 18665675664.136368
[2025-05-24 23:51:00] 2025-05-25 03:50:41,112 | INFO     | current memory leak: -10.68 B/s (using 90 data points, chi2=0.01)
[2025-05-24 23:51:00] 2025-05-25 03:50:41,113 | INFO     | ..............................
[2025-05-24 23:51:00] 2025-05-25 03:50:41,113 | INFO     | . Timing measurements:
[2025-05-24 23:51:00] 2025-05-25 03:50:41,113 | INFO     | . get job = 0 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,113 | INFO     | . initial setup = 2 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,113 | INFO     | . payload setup = 9 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,113 | INFO     | . stage-in = 0 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,114 | INFO     | . payload execution = 5882 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,114 | INFO     | . stage-out = 0 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,114 | INFO     | . log creation = 0 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,114 | INFO     | ..............................
[2025-05-24 23:51:00] 2025-05-25 03:50:41,475 | INFO     | 
[2025-05-24 23:51:00] 2025-05-25 03:50:41,475 | INFO     | job summary report
[2025-05-24 23:51:00] 2025-05-25 03:50:41,475 | INFO     | --------------------------------------------------
[2025-05-24 23:51:00] 2025-05-25 03:50:41,475 | INFO     | PanDA job id: 6665679126
[2025-05-24 23:51:00] 2025-05-25 03:50:41,475 | INFO     | task id: 44871837
[2025-05-24 23:51:00] 2025-05-25 03:50:41,475 | INFO     | errors: (none)
[2025-05-24 23:51:00] 2025-05-25 03:50:41,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 23:51:00] 2025-05-25 03:50:41,476 | INFO     | pilot state: finished 
[2025-05-24 23:51:00] 2025-05-25 03:50:41,476 | INFO     | transexitcode: 0
[2025-05-24 23:51:00] 2025-05-25 03:50:41,476 | INFO     | exeerrorcode: 0
[2025-05-24 23:51:00] 2025-05-25 03:50:41,476 | INFO     | exeerrordiag: 
[2025-05-24 23:51:00] 2025-05-25 03:50:41,476 | INFO     | exitcode: 0
[2025-05-24 23:51:00] 2025-05-25 03:50:41,477 | INFO     | exitmsg: OK
[2025-05-24 23:51:00] 2025-05-25 03:50:41,477 | INFO     | cpuconsumptiontime: 62455 s
[2025-05-24 23:51:00] 2025-05-25 03:50:41,477 | INFO     | nevents: 400
[2025-05-24 23:51:00] 2025-05-25 03:50:41,477 | INFO     | neventsw: 0
[2025-05-24 23:51:00] 2025-05-25 03:50:41,477 | INFO     | pid: 9845
[2025-05-24 23:51:00] 2025-05-25 03:50:41,477 | INFO     | pgrp: 9845
[2025-05-24 23:51:00] 2025-05-25 03:50:41,478 | INFO     | corecount: 12
[2025-05-24 23:51:00] 2025-05-25 03:50:41,478 | INFO     | event service: False
[2025-05-24 23:51:00] 2025-05-25 03:50:41,478 | INFO     | sizes: {0: 2393737, 5: 2393943, 11: 2393999, 5895: 2420552, 5896: 2429493, 5899: 2429549, 5903: 2429847}
[2025-05-24 23:51:00] 2025-05-25 03:50:41,478 | INFO     | --------------------------------------------------
[2025-05-24 23:51:00] 2025-05-25 03:50:41,478 | INFO     | 
[2025-05-24 23:51:00] 2025-05-25 03:50:41,478 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-24 23:51:00] 2025-05-25 03:50:41,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,505 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,505 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,505 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 23:51:00] 2025-05-25 03:50:41,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,506 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 23:51:00] 2025-05-25 03:50:41,506 | INFO     | job 6665679126 has completed (purged errors)
[2025-05-24 23:51:00] 2025-05-25 03:50:41,506 | INFO     | overall cleanup function is called
[2025-05-24 23:51:00] 2025-05-25 03:50:42,514 | INFO     | --- collectZombieJob: --- 10, [9845]
[2025-05-24 23:51:00] 2025-05-25 03:50:42,514 | INFO     | zombie collector waiting for pid 9845
[2025-05-24 23:51:00] 2025-05-25 03:50:42,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 23:51:00] 2025-05-25 03:50:42,514 | INFO     | collected zombie processes
[2025-05-24 23:51:00] 2025-05-25 03:50:42,514 | INFO     | will attempt to kill all subprocesses of pid=9845
[2025-05-24 23:51:00] 2025-05-25 03:50:42,607 | INFO     | process IDs to be killed: [9845] (in reverse order)
[2025-05-24 23:51:00] 2025-05-25 03:50:42,659 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 23:51:00] 2025-05-25 03:50:42,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 23:51:00] 2025-05-25 03:50:42,663 | INFO     | did not find any defunct processes belonging to 9845
[2025-05-24 23:51:00] 2025-05-25 03:50:42,666 | INFO     | did not find any defunct processes belonging to 9845
[2025-05-24 23:51:00] 2025-05-25 03:50:42,666 | INFO     | ready for new job
[2025-05-24 23:51:00] 2025-05-25 03:50:42,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 23:51:00] 2025-05-25 03:50:42,667 | INFO     | **************************************
[2025-05-24 23:51:00] 2025-05-25 03:50:42,668 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 23:51:00] 2025-05-25 03:50:42,668 | INFO     | **************************************
[2025-05-24 23:51:00] 2025-05-25 03:50:42,668 | INFO     | 
[2025-05-24 23:51:00] 2025-05-25 03:50:42,668 | INFO     | architecture information:
[2025-05-24 23:51:00] 2025-05-25 03:50:42,669 | INFO     | executing command: cat /etc/os-release
[2025-05-24 23:51:00] 2025-05-25 03:50:42,684 | INFO     | cat /etc/os-release:
[2025-05-24 23:51:00] NAME="CentOS Linux"
[2025-05-24 23:51:00] VERSION="7 (Core)"
[2025-05-24 23:51:00] ID="centos"
[2025-05-24 23:51:00] ID_LIKE="rhel fedora"
[2025-05-24 23:51:00] VERSION_ID="7"
[2025-05-24 23:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 23:51:00] ANSI_COLOR="0;31"
[2025-05-24 23:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 23:51:00] HOME_URL="https://www.centos.org/"
[2025-05-24 23:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 23:51:00] 
[2025-05-24 23:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 23:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 23:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 23:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 23:51:00] 
[2025-05-24 23:51:00] 2025-05-25 03:50:42,684 | INFO     | **************************************
[2025-05-24 23:51:00] 2025-05-25 03:50:43,187 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-24 23:51:00] 2025-05-25 03:50:43,205 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-05-24 23:51:00] 2025-05-25 03:50:43,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 23:51:00] 2025-05-25 03:50:43,205 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 23:51:00] 2025-05-25 03:50:43,205 | INFO     | update_server=False
[2025-05-24 23:51:00] 2025-05-25 03:50:43,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 23:51:00] 2025-05-25 03:50:43,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 23:51:00] 2025-05-25 03:50:43,206 | INFO     | aborting loop
[2025-05-24 23:51:00] 2025-05-25 03:50:43,206 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 23:51:00] 2025-05-25 03:50:43,207 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 23:51:00] 2025-05-25 03:50:43,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 23:51:00] 2025-05-25 03:50:43,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 23:51:00] 2025-05-25 03:50:43,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 23:51:00] 2025-05-25 03:50:43,237 | INFO     | all payload control threads have been joined
[2025-05-24 23:51:00] 2025-05-25 03:50:43,700 | INFO     | all data control threads have been joined
[2025-05-24 23:51:00] 2025-05-25 03:50:44,207 | INFO     | [job] job monitor thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:44,211 | INFO     | [job] retrieve thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:44,242 | INFO     | [payload] control thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:44,316 | INFO     | [payload] failed_post thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:44,354 | INFO     | all job control threads have been joined
[2025-05-24 23:51:00] 2025-05-25 03:50:44,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 23:51:00] 2025-05-25 03:50:44,619 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:44,705 | INFO     | [data] control thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:44,724 | INFO     | [data] copytool_in thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:45,359 | INFO     | [job] control thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:45,402 | INFO     | [payload] validate_post thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:45,554 | INFO     | [job] validate thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:45,702 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:45,711 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:46,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 23:51:00] 2025-05-25 03:50:46,574 | INFO     | [data] copytool_out thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:47,210 | INFO     | [job] queue monitor thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:47,213 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:53,358 | INFO     | job.realtimelogging is not enabled
[2025-05-24 23:51:00] 2025-05-25 03:50:54,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 23:51:00] 2025-05-25 03:50:54,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686107641664)>', '<ExcThread(monitor, started 139685070362368)>']
[2025-05-24 23:51:00] 2025-05-25 03:50:55,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 23:51:00] 2025-05-25 03:50:55,267 | INFO     | [monitor] control thread has ended
[2025-05-24 23:51:00] 2025-05-25 03:50:59,839 | INFO     | all workflow threads have been joined
[2025-05-24 23:51:00] 2025-05-25 03:50:59,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 23:51:00] 2025-05-25 03:50:59,839 | INFO     | traces error code: 0
[2025-05-24 23:51:00] 2025-05-25 03:50:59,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 23:51:00] 2025-05-25 03:50:59,923 [wrapper] ==== pilot stdout END ====
[2025-05-24 23:51:00] 2025-05-25 03:50:59,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 23:51:00] 2025-05-25 03:50:59,931 [wrapper] pilotpid: 3346
[2025-05-24 23:51:00] 2025-05-25 03:50:59,934 [wrapper] Pilot exit status: 0
[2025-05-24 23:51:00] 2025-05-25 03:50:59,949 [wrapper] pandaids: 6665679126
[2025-05-24 23:51:00] 2025-05-25 03:50:59,987 [wrapper] cleanup supervisor_pilot  3163 3347
[2025-05-24 23:51:00] 2025-05-25 03:50:59,990 [wrapper] Test setup, not cleaning
[2025-05-24 23:51:00] 2025-05-25 03:50:59,994 [wrapper] apfmon messages muted
[2025-05-24 23:51:00] 2025-05-25 03:50:59,997 [wrapper] ==== wrapper stdout END ====
[2025-05-24 23:51:00] 2025-05-25 03:51:00,001 [wrapper] ==== wrapper stderr END ====
[2025-05-24 23:51:00]  *** Error codes and diagnostics ***
[2025-05-24 23:51:00]     "exeErrorCode": 0,
[2025-05-24 23:51:00]     "exeErrorDiag": "",
[2025-05-24 23:51:00]     "pilotErrorCode": 0,
[2025-05-24 23:51:00]     "pilotErrorDiag": "",
[2025-05-24 23:51:00]  *** Listing of results directory ***
[2025-05-24 23:51:00] total 427464
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas    495897 May 24 15:53 pilot3.tar.gz
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas      5111 May 24 16:15 queuedata.json
[2025-05-24 23:51:00] -rwx------ 1 boincer umatlas     37140 May 24 16:17 runpilot2-wrapper.sh
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas       100 May 24 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 23:51:00] -rwxr-xr-x 1 boincer umatlas      7986 May 24 22:11 run_atlas
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas       105 May 24 22:11 job.xml
[2025-05-24 23:51:00] -rw-r--r-- 2 boincer umatlas 225716848 May 24 22:11 EVNT.44871834._000931.pool.root.1
[2025-05-24 23:51:00] -rw-r--r-- 2 boincer umatlas     15093 May 24 22:11 start_atlas.sh
[2025-05-24 23:51:00] drwxrwx--x 2 boincer umatlas      4096 May 24 22:11 shared
[2025-05-24 23:51:00] -rw-r--r-- 2 boincer umatlas    508874 May 24 22:11 input.tar.gz
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas         0 May 24 22:11 boinc_lockfile
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas      2557 May 24 22:11 pandaJob.out
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas    990803 May 24 22:11 agis_schedconf.cvmfs.json
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas   1596740 May 24 22:12 agis_ddmendpoints.agis.ALL.json
[2025-05-24 23:51:00] drwx------ 4 boincer umatlas      4096 May 24 22:12 pilot3
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas      5868 May 24 23:47 init_data.xml
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas 206350354 May 24 23:50 HITS.44871837._023349.pool.root.1
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas        95 May 24 23:50 pilot_heartbeat.json
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas      1048 May 24 23:50 memory_monitor_summary.json
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas    360453 May 24 23:50 log.44871837._023349.job.log.tgz.1
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas        27 May 24 23:50 wrapper_checkpoint.txt
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas      8192 May 24 23:50 boinc_mmap_file
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas       530 May 24 23:50 boinc_task_state.xml
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas      7752 May 24 23:50 heartbeat.json
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas      4548 May 24 23:50 pilotlog.txt
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas    550221 May 24 23:51 log.44871837._023349.job.log.1
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas       357 May 24 23:51 output.list
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas       620 May 24 23:51 runtime_log
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas    931840 May 24 23:51 result.tar.gz
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas       659 May 24 23:51 zb7LDmxTAd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYTSKDmTMBVem.diag
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas      8661 May 24 23:51 runtime_log.err
[2025-05-24 23:51:00] -rw-r--r-- 1 boincer umatlas     21327 May 24 23:51 stderr.txt
[2025-05-24 23:51:00] HITS file was successfully produced:
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas 206350354 May 24 23:50 shared/HITS.pool.root.1
[2025-05-24 23:51:00]  *** Contents of shared directory: ***
[2025-05-24 23:51:00] total 423376
[2025-05-24 23:51:00] -rw-r--r-- 2 boincer umatlas 225716848 May 24 22:11 ATLAS.root_0
[2025-05-24 23:51:00] -rw-r--r-- 2 boincer umatlas     15093 May 24 22:11 start_atlas.sh
[2025-05-24 23:51:00] -rw-r--r-- 2 boincer umatlas    508874 May 24 22:11 input.tar.gz
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas 206350354 May 24 23:50 HITS.pool.root.1
[2025-05-24 23:51:00] -rw------- 1 boincer umatlas    931840 May 24 23:51 result.tar.gz
23:51:01 (32024): run_atlas exited; CPU time 62443.150233
23:51:01 (32024): called boinc_finish(0)

</stderr_txt>
]]>

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