Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:37:17 (860865): wrapper (7.7.26015): starting
16:37:17 (860865): wrapper: running run_atlas (--nthreads 3)
[2025-05-25 16:37:17] Arguments: --nthreads 3
[2025-05-25 16:37:17] Threads: 3
[2025-05-25 16:37:17] Checking for CVMFS
[2025-05-25 16:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 16:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 16:37:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 16:37:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 16:37:17] 2.9.2.0 348546 1848 76036 146405 3 55 25849042 36864000 0 130560 0 1301314 99.988 468137 17596 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-25 16:37:17] CVMFS is ok
[2025-05-25 16:37:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 16:37:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 16:37:17] Further information can be found at the LHC@home message board.
[2025-05-25 16:37:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 16:37:17] Checking for apptainer binary...
[2025-05-25 16:37:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 16:37:17] Running /usr/bin/apptainer --version
[2025-05-25 16:37:17] apptainer version 1.3.6-6.1
[2025-05-25 16:37:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 16:37:17] thA335b
[2025-05-25 16:37:17] apptainer works
[2025-05-25 16:37:17] Set ATHENA_PROC_NUMBER=3
[2025-05-25 16:37:17] Set ATHENA_CORE_NUMBER=3
[2025-05-25 16:37:17] Starting ATLAS job with PandaID=6665675569
[2025-05-25 16:37:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 18:17:13]  *** The last 200 lines of the pilot log: ***
[2025-05-25 18:17:13]  filetype=log
[2025-05-25 18:17:13]  guid=b1348acf-1a3d-4e94-8e1c-03a78305133f
[2025-05-25 18:17:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-25 18:17:13]  is_altstaged=None
[2025-05-25 18:17:13]  is_tar=False
[2025-05-25 18:17:13]  lfn=log.44871837._021110.job.log.tgz.1
[2025-05-25 18:17:13]  mtime=0
[2025-05-25 18:17:13]  protocol_id=None
[2025-05-25 18:17:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 18:17:13]  replicas=None
[2025-05-25 18:17:13]  scope=mc23_13p6TeV
[2025-05-25 18:17:13]  status=None
[2025-05-25 18:17:13]  status_code=0
[2025-05-25 18:17:13]  storage_token=
[2025-05-25 18:17:13]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6665675569/log.44871837._021110.job.log.tgz.1
[2025-05-25 18:17:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/96/log.44871837._021110.job.log.tgz.1
[2025-05-25 18:17:13]  workdir=None
[2025-05-25 18:17:13] ]
[2025-05-25 18:17:13] 2025-05-25 16:16:28,097 | INFO     | transferring file log.44871837._021110.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665675569/log.44871837._021110.job.log.tgz.1 to /local/data/boinc/
[2025-05-25 18:17:13] 2025-05-25 16:16:28,097 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665675569/log.44871837._021110.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0211
[2025-05-25 18:17:13] 2025-05-25 16:16:28,111 | INFO     | adding to output.list: log.44871837._021110.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/96/log.44871837._021110.job.log.tg
[2025-05-25 18:17:13] 2025-05-25 16:16:28,111 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 18:17:13] 2025-05-25 16:16:28,111 | INFO     | summary of transferred files:
[2025-05-25 18:17:13] 2025-05-25 16:16:28,111 | INFO     |  -- lfn=log.44871837._021110.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 18:17:13] 2025-05-25 16:16:28,112 | INFO     | stage-out finished correctly
[2025-05-25 18:17:13] 2025-05-25 16:16:28,779 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 18:17:13] 2025-05-25 16:16:28,807 | INFO     | job 6665675569 has state=finished
[2025-05-25 18:17:13] 2025-05-25 16:16:28,808 | INFO     | preparing for final server update for job 6665675569 in state='finished'
[2025-05-25 18:17:13] 2025-05-25 16:16:28,808 | INFO     | this job has now completed (state=finished)
[2025-05-25 18:17:13] 2025-05-25 16:16:28,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 18:17:13] 2025-05-25 16:16:28,808 | INFO     | log transfer has been attempted: DONE
[2025-05-25 18:17:13] 2025-05-25 16:16:28,808 | INFO     | job 6665675569 has finished - writing final server update
[2025-05-25 18:17:13] 2025-05-25 16:16:28,808 | INFO     | total number of processed events: 400 (read)
[2025-05-25 18:17:13] 2025-05-25 16:16:28,809 | INFO     | executing command: lscpu
[2025-05-25 18:17:13] 2025-05-25 16:16:28,822 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 18:17:13] 2025-05-25 16:16:29,484 | WARNING  | process 871007 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 18:17:13] 2025-05-25 16:16:29,484 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665675569/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 18:17:13] 2025-05-25 16:16:29,526 | INFO     | number of running child processes to parent process 871007: 1
[2025-05-25 18:17:13] 2025-05-25 16:16:29,526 | INFO     | maximum number of monitored processes: 6
[2025-05-25 18:17:13] 2025-05-25 16:16:30,109 | INFO     | PID=864504 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665675569/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | INFO     | extracted standard info from prmon json
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 18:17:13] 2025-05-25 16:16:31,260 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | fitting pss+swap vs Time
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | sum of square deviations: 233641590.0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | sum of deviations: -15773574650.999996
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | mean x: 1748186913.0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | mean y: 2458951.813186813
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | -- intersect: 118025781666.34676
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | intersect: 118025781666.34676
[2025-05-25 18:17:13] 2025-05-25 16:16:31,261 | INFO     | chi2: 0.09264543350066412
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | -- intersect: 118025781666.34676
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | current memory leak: -67.51 B/s (using 91 data points, chi2=0.09)
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | ..............................
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . Timing measurements:
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . get job = 0 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . initial setup = 1 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . payload setup = 3 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . stage-in = 0 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . payload execution = 5923 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . stage-out = 0 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | . log creation = 0 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,262 | INFO     | ..............................
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | 
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | job summary report
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | --------------------------------------------------
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | PanDA job id: 6665675569
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | task id: 44871837
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | errors: (none)
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | pilot state: finished 
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | transexitcode: 0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | exeerrorcode: 0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | exeerrordiag: 
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | exitcode: 0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | exitmsg: OK
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | cpuconsumptiontime: 17059 s
[2025-05-25 18:17:13] 2025-05-25 16:16:31,735 | INFO     | nevents: 400
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | neventsw: 0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | pid: 871007
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | pgrp: 871007
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | corecount: 3
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | event service: False
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | sizes: {0: 2393742, 2: 2393948, 10: 2393976, 5930: 2420743, 5931: 2420742, 5932: 2429929, 5935: 2430043}
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | --------------------------------------------------
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | 
[2025-05-25 18:17:13] 2025-05-25 16:16:31,736 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-25 18:17:13] 2025-05-25 16:16:31,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | job 6665675569 has completed (purged errors)
[2025-05-25 18:17:13] 2025-05-25 16:16:31,751 | INFO     | overall cleanup function is called
[2025-05-25 18:17:13] 2025-05-25 16:16:32,758 | INFO     | --- collectZombieJob: --- 10, [871007]
[2025-05-25 18:17:13] 2025-05-25 16:16:32,758 | INFO     | zombie collector waiting for pid 871007
[2025-05-25 18:17:13] 2025-05-25 16:16:32,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 18:17:13] 2025-05-25 16:16:32,758 | INFO     | collected zombie processes
[2025-05-25 18:17:13] 2025-05-25 16:16:32,758 | INFO     | will attempt to kill all subprocesses of pid=871007
[2025-05-25 18:17:13] 2025-05-25 16:16:32,803 | INFO     | process IDs to be killed: [871007] (in reverse order)
[2025-05-25 18:17:13] 2025-05-25 16:16:32,829 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 18:17:13] 2025-05-25 16:16:32,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 18:17:13] 2025-05-25 16:16:32,830 | INFO     | did not find any defunct processes belonging to 871007
[2025-05-25 18:17:13] 2025-05-25 16:16:32,831 | INFO     | did not find any defunct processes belonging to 871007
[2025-05-25 18:17:13] 2025-05-25 16:16:32,832 | INFO     | ready for new job
[2025-05-25 18:17:13] 2025-05-25 16:16:32,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 18:17:13] 2025-05-25 16:16:32,832 | INFO     | **************************************
[2025-05-25 18:17:13] 2025-05-25 16:16:32,832 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 18:17:13] 2025-05-25 16:16:32,832 | INFO     | **************************************
[2025-05-25 18:17:13] 2025-05-25 16:16:32,832 | INFO     | 
[2025-05-25 18:17:13] 2025-05-25 16:16:32,833 | INFO     | architecture information:
[2025-05-25 18:17:13] 2025-05-25 16:16:32,833 | INFO     | executing command: cat /etc/os-release
[2025-05-25 18:17:13] 2025-05-25 16:16:32,842 | INFO     | cat /etc/os-release:
[2025-05-25 18:17:13] NAME="CentOS Linux"
[2025-05-25 18:17:13] VERSION="7 (Core)"
[2025-05-25 18:17:13] ID="centos"
[2025-05-25 18:17:13] ID_LIKE="rhel fedora"
[2025-05-25 18:17:13] VERSION_ID="7"
[2025-05-25 18:17:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 18:17:13] ANSI_COLOR="0;31"
[2025-05-25 18:17:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 18:17:13] HOME_URL="https://www.centos.org/"
[2025-05-25 18:17:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 18:17:13] 
[2025-05-25 18:17:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 18:17:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 18:17:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 18:17:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 18:17:13] 
[2025-05-25 18:17:13] 2025-05-25 16:16:32,842 | INFO     | **************************************
[2025-05-25 18:17:13] 2025-05-25 16:16:33,345 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | INFO     | sufficient remaining disk space (374332194816 B)
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | INFO     | update_server=False
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 18:17:13] 2025-05-25 16:16:33,359 | INFO     | aborting loop
[2025-05-25 18:17:13] 2025-05-25 16:16:33,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 18:17:13] 2025-05-25 16:16:33,897 | INFO     | all data control threads have been joined
[2025-05-25 18:17:13] 2025-05-25 16:16:33,931 | INFO     | all job control threads have been joined
[2025-05-25 18:17:13] 2025-05-25 16:16:34,121 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 18:17:13] 2025-05-25 16:16:34,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 18:17:13] 2025-05-25 16:16:34,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 18:17:13] 2025-05-25 16:16:34,357 | INFO     | all payload control threads have been joined
[2025-05-25 18:17:13] 2025-05-25 16:16:34,365 | INFO     | [job] job monitor thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:34,365 | INFO     | [job] retrieve thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:34,644 | INFO     | [payload] validate_post thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:34,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 18:17:13] 2025-05-25 16:16:34,902 | INFO     | [data] control thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:34,937 | INFO     | [job] control thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,310 | INFO     | [data] copytool_in thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,363 | INFO     | [payload] control thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,401 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,656 | INFO     | [data] copytool_out thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,720 | INFO     | [payload] failed_post thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,737 | INFO     | [job] validate thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,779 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:35,813 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:36,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 18:17:13] 2025-05-25 16:16:37,309 | INFO     | [job] queue monitor thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:38,820 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:44,111 | INFO     | job.realtimelogging is not enabled
[2025-05-25 18:17:13] 2025-05-25 16:16:45,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 18:17:13] 2025-05-25 16:16:46,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159396230976)>', '<ExcThread(monitor, started 140158531790592)>']
[2025-05-25 18:17:13] 2025-05-25 16:16:47,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 18:17:13] 2025-05-25 16:16:47,186 | INFO     | [monitor] control thread has ended
[2025-05-25 18:17:13] 2025-05-25 16:16:51,914 | INFO     | all workflow threads have been joined
[2025-05-25 18:17:13] 2025-05-25 16:16:51,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 18:17:13] 2025-05-25 16:16:51,914 | INFO     | traces error code: 0
[2025-05-25 18:17:13] 2025-05-25 16:16:51,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 18:17:13] 2025-05-25 16:16:51,962 [wrapper] ==== pilot stdout END ====
[2025-05-25 18:17:13] 2025-05-25 16:16:51,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 18:17:13] 2025-05-25 16:16:51,967 [wrapper] pilotpid: 864504
[2025-05-25 18:17:13] 2025-05-25 16:16:51,969 [wrapper] Pilot exit status: 0
[2025-05-25 18:17:13] 2025-05-25 16:16:51,977 [wrapper] pandaids: 6665675569
[2025-05-25 18:17:13] 2025-05-25 16:16:51,994 [wrapper] cleanup supervisor_pilot  883945 864505
[2025-05-25 18:17:13] 2025-05-25 16:16:51,997 [wrapper] Test setup, not cleaning
[2025-05-25 18:17:13] 2025-05-25 16:16:51,999 [wrapper] apfmon messages muted
[2025-05-25 18:17:13] 2025-05-25 16:16:52,002 [wrapper] ==== wrapper stdout END ====
[2025-05-25 18:17:13] 2025-05-25 16:16:52,004 [wrapper] ==== wrapper stderr END ====
[2025-05-25 18:17:13]  *** Error codes and diagnostics ***
[2025-05-25 18:17:13]     "exeErrorCode": 0,
[2025-05-25 18:17:13]     "exeErrorDiag": "",
[2025-05-25 18:17:13]     "pilotErrorCode": 0,
[2025-05-25 18:17:13]     "pilotErrorDiag": "",
[2025-05-25 18:17:13]  *** Listing of results directory ***
[2025-05-25 18:17:13] total 415032
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc    495897 May 24 18:47 pilot3.tar.gz
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc      5111 May 24 19:26 queuedata.json
[2025-05-25 18:17:13] -rwx------ 1 boinc boinc     37140 May 24 19:26 runpilot2-wrapper.sh
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc       100 May 25 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 18:17:13] -rwxr-xr-x 1 boinc boinc      7986 May 25 16:37 run_atlas
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc       105 May 25 16:37 job.xml
[2025-05-25 18:17:13] -rw-r--r-- 2 boinc boinc 222645350 May 25 16:37 EVNT.44871834._000841.pool.root.1
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc      6930 May 25 16:37 init_data.xml
[2025-05-25 18:17:13] drwxrwx--x 2 boinc boinc      4096 May 25 16:37 shared
[2025-05-25 18:17:13] -rw-r--r-- 2 boinc boinc    508883 May 25 16:37 input.tar.gz
[2025-05-25 18:17:13] -rw-r--r-- 2 boinc boinc     15093 May 25 16:37 start_atlas.sh
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc         0 May 25 16:37 boinc_lockfile
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc      2558 May 25 16:37 pandaJob.out
[2025-05-25 18:17:13] -rw------- 1 boinc boinc    990811 May 25 16:37 agis_schedconf.cvmfs.json
[2025-05-25 18:17:13] -rw------- 1 boinc boinc   1596740 May 25 16:37 agis_ddmendpoints.agis.ALL.json
[2025-05-25 18:17:13] drwx------ 4 boinc boinc      4096 May 25 16:37 pilot3
[2025-05-25 18:17:13] -rw------- 1 boinc boinc        95 May 25 18:15 pilot_heartbeat.json
[2025-05-25 18:17:13] -rw------- 1 boinc boinc 196892467 May 25 18:16 HITS.44871837._021110.pool.root.1
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc       529 May 25 18:16 boinc_task_state.xml
[2025-05-25 18:17:13] -rw------- 1 boinc boinc      1017 May 25 18:16 memory_monitor_summary.json
[2025-05-25 18:17:13] -rw------- 1 boinc boinc    242538 May 25 18:16 log.44871837._021110.job.log.tgz.1
[2025-05-25 18:17:13] -rw------- 1 boinc boinc      7652 May 25 18:16 heartbeat.json
[2025-05-25 18:17:13] -rw------- 1 boinc boinc      4429 May 25 18:16 pilotlog.txt
[2025-05-25 18:17:13] -rw------- 1 boinc boinc    567017 May 25 18:16 log.44871837._021110.job.log.1
[2025-05-25 18:17:13] -rw------- 1 boinc boinc       357 May 25 18:16 output.list
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc       620 May 25 18:16 runtime_log
[2025-05-25 18:17:13] -rw------- 1 boinc boinc    829440 May 25 18:16 result.tar.gz
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc      8738 May 25 18:16 runtime_log.err
[2025-05-25 18:17:13] -rw------- 1 boinc boinc       659 May 25 18:16 DbHNDm3o7c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA7RKDmG0nEDn.diag
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc      8192 May 25 18:17 boinc_mmap_file
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc        27 May 25 18:17 wrapper_checkpoint.txt
[2025-05-25 18:17:13] -rw-r--r-- 1 boinc boinc     21267 May 25 18:17 stderr.txt
[2025-05-25 18:17:13] HITS file was successfully produced:
[2025-05-25 18:17:13] -rw------- 1 boinc boinc 196892467 May 25 18:16 shared/HITS.pool.root.1
[2025-05-25 18:17:13]  *** Contents of shared directory: ***
[2025-05-25 18:17:13] total 411044
[2025-05-25 18:17:13] -rw-r--r-- 2 boinc boinc 222645350 May 25 16:37 ATLAS.root_0
[2025-05-25 18:17:13] -rw-r--r-- 2 boinc boinc    508883 May 25 16:37 input.tar.gz
[2025-05-25 18:17:13] -rw-r--r-- 2 boinc boinc     15093 May 25 16:37 start_atlas.sh
[2025-05-25 18:17:13] -rw------- 1 boinc boinc 196892467 May 25 18:16 HITS.pool.root.1
[2025-05-25 18:17:13] -rw------- 1 boinc boinc    829440 May 25 18:16 result.tar.gz
18:17:15 (860865): run_atlas exited; CPU time 17078.530650
18:17:15 (860865): called boinc_finish(0)

</stderr_txt>
]]>

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