Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:22:00 (1129736): wrapper (7.7.26015): starting
21:22:00 (1129736): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 21:22:00] Arguments: --nthreads 8
[2025-05-24 21:22:00] Threads: 8
[2025-05-24 21:22:00] Checking for CVMFS
[2025-05-24 21:22:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 21:22:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 21:22:01] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 21:22:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 21:22:02] 2.12.6.0 9858 16336 422820 146385 2 116 25111207 32935936 24857 16776704 1 58509542 99.520 73644165 21777 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 21:22:02] CVMFS is ok
[2025-05-24 21:22:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 21:22:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 21:22:02] Further information can be found at the LHC@home message board.
[2025-05-24 21:22:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 21:22:02] Checking for apptainer binary...
[2025-05-24 21:22:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 21:22:02] Running /usr/bin/apptainer --version
[2025-05-24 21:22:02] apptainer version 1.4.1-1.el9
[2025-05-24 21:22:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 21:22:03] c6-2-11-2.aglt2.org
[2025-05-24 21:22:03] apptainer works
[2025-05-24 21:22:03] Set ATHENA_PROC_NUMBER=8
[2025-05-24 21:22:03] Set ATHENA_CORE_NUMBER=8
[2025-05-24 21:22:03] Starting ATLAS job with PandaID=6665631652
[2025-05-24 21:22:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:46:14 (2001185): wrapper (7.7.26015): starting
00:46:14 (2001185): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 00:46:14] Arguments: --nthreads 8
[2025-05-25 00:46:14] Threads: 8
[2025-05-25 00:46:14] This job has been restarted, cleaning up previous attempt
[2025-05-25 00:46:14] Checking for CVMFS
[2025-05-25 00:46:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 00:46:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 00:46:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 00:46:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 00:46:15] 2.12.6.0 9858 16541 426624 146390 2 305 25389551 32935936 22872 16776704 1 59394877 99.527 73745253 21787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-25 00:46:15] CVMFS is ok
[2025-05-25 00:46:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 00:46:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 00:46:15] Further information can be found at the LHC@home message board.
[2025-05-25 00:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 00:46:15] Checking for apptainer binary...
[2025-05-25 00:46:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 00:46:15] Running /usr/bin/apptainer --version
[2025-05-25 00:46:15] apptainer version 1.4.1-1.el9
[2025-05-25 00:46:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 00:46:15] c6-2-11-2.aglt2.org
[2025-05-25 00:46:15] apptainer works
[2025-05-25 00:46:15] Set ATHENA_PROC_NUMBER=8
[2025-05-25 00:46:15] Set ATHENA_CORE_NUMBER=8
[2025-05-25 00:46:15] Starting ATLAS job with PandaID=6665631652
[2025-05-25 00:46:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 06:22:59]  *** The last 200 lines of the pilot log: ***
[2025-05-25 06:22:59] 2025-05-25 10:22:41,338 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 06:22:59] 2025-05-25 10:22:41,339 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665631652/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 06:22:59] 2025-05-25 10:22:41,339 | INFO     | extracted standard info from prmon json
[2025-05-25 06:22:59] 2025-05-25 10:22:41,339 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 06:22:59] 2025-05-25 10:22:41,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 06:22:59] 2025-05-25 10:22:41,348 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 06:22:59] 2025-05-25 10:22:41,348 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 06:22:59] 2025-05-25 10:22:41,374 | INFO     | fitting pss+swap vs Time
[2025-05-25 06:22:59] 2025-05-25 10:22:41,375 | INFO     | sum of square deviations: 11143276848.254456
[2025-05-25 06:22:59] 2025-05-25 10:22:41,405 | INFO     | sum of deviations: 57293052573.25457
[2025-05-25 06:22:59] 2025-05-25 10:22:41,405 | INFO     | mean x: 1748158480.5272727
[2025-05-25 06:22:59] 2025-05-25 10:22:41,406 | INFO     | mean y: 2095159.0272727273
[2025-05-25 06:22:59] 2025-05-25 10:22:41,406 | INFO     | -- intersect: -8986045142.532143
[2025-05-25 06:22:59] 2025-05-25 10:22:41,406 | INFO     | intersect: -8986045142.532143
[2025-05-25 06:22:59] 2025-05-25 10:22:41,406 | INFO     | chi2: 3.622008297373739
[2025-05-25 06:22:59] 2025-05-25 10:22:41,407 | INFO     | sum of square deviations: 10644395820.750748
[2025-05-25 06:22:59] 2025-05-25 10:22:41,415 | INFO     | sum of deviations: 99673207658.12323
[2025-05-25 06:22:59] 2025-05-25 10:22:41,415 | INFO     | mean x: 1748158328.0276923
[2025-05-25 06:22:59] 2025-05-25 10:22:41,415 | INFO     | mean y: 2108028.4307692307
[2025-05-25 06:22:59] 2025-05-25 10:22:41,415 | INFO     | -- intersect: -16367496313.893684
[2025-05-25 06:22:59] 2025-05-25 10:22:41,415 | INFO     | intersect: -16367496313.893684
[2025-05-25 06:22:59] 2025-05-25 10:22:41,416 | INFO     | chi2: 2.0772165700576677
[2025-05-25 06:22:59] 2025-05-25 10:22:41,416 | INFO     | current chi2=2.0772165700576677 (change=42.65014324887592 %)
[2025-05-25 06:22:59] 2025-05-25 10:22:41,416 | INFO     | sum of square deviations: 10160631355.746881
[2025-05-25 06:22:59] 2025-05-25 10:22:41,419 | INFO     | sum of deviations: 100516777500.50926
[2025-05-25 06:22:59] 2025-05-25 10:22:41,419 | INFO     | mean x: 1748158175.528125
[2025-05-25 06:22:59] 2025-05-25 10:22:41,420 | INFO     | mean y: 2108290.665625
[2025-05-25 06:22:59] 2025-05-25 10:22:41,420 | INFO     | -- intersect: -17292016475.10195
[2025-05-25 06:22:59] 2025-05-25 10:22:41,420 | INFO     | intersect: -17292016475.10195
[2025-05-25 06:22:59] 2025-05-25 10:22:41,420 | INFO     | chi2: 2.0658945311272463
[2025-05-25 06:22:59] 2025-05-25 10:22:41,420 | INFO     | current chi2=2.0658945311272463 (change=0.5450581847663126 %)
[2025-05-25 06:22:59] 2025-05-25 10:22:41,420 | INFO     | right removable region: 319
[2025-05-25 06:22:59] 2025-05-25 10:22:41,421 | INFO     | sum of square deviations: 10644390330.750748
[2025-05-25 06:22:59] 2025-05-25 10:22:41,442 | INFO     | sum of deviations: 1120475302.2769394
[2025-05-25 06:22:59] 2025-05-25 10:22:41,442 | INFO     | mean x: 1748158633.0276923
[2025-05-25 06:22:59] 2025-05-25 10:22:41,442 | INFO     | mean y: 2112265.969230769
[2025-05-25 06:22:59] 2025-05-25 10:22:41,442 | INFO     | -- intersect: -181906593.90957573
[2025-05-25 06:22:59] 2025-05-25 10:22:41,442 | INFO     | intersect: -181906593.90957573
[2025-05-25 06:22:59] 2025-05-25 10:22:41,443 | INFO     | chi2: 1.8816191387406134
[2025-05-25 06:22:59] 2025-05-25 10:22:41,443 | INFO     | current chi2=1.8816191387406134 (change=48.05039126760296 %)
[2025-05-25 06:22:59] 2025-05-25 10:22:41,462 | INFO     | sum of square deviations: 10160660145.846836
[2025-05-25 06:22:59] 2025-05-25 10:22:41,465 | INFO     | sum of deviations: -18701044256.27501
[2025-05-25 06:22:59] 2025-05-25 10:22:41,465 | INFO     | mean x: 1748158785.521875
[2025-05-25 06:22:59] 2025-05-25 10:22:41,465 | INFO     | mean y: 2118524.325
[2025-05-25 06:22:59] 2025-05-25 10:22:41,466 | INFO     | -- intersect: 3219664859.481535
[2025-05-25 06:22:59] 2025-05-25 10:22:41,466 | INFO     | intersect: 3219664859.481535
[2025-05-25 06:22:59] 2025-05-25 10:22:41,484 | INFO     | chi2: 1.6985903632205706
[2025-05-25 06:22:59] 2025-05-25 10:22:41,484 | INFO     | current chi2=1.6985903632205706 (change=9.72719567693948 %)
[2025-05-25 06:22:59] 2025-05-25 10:22:41,485 | INFO     | left removable region: 20
[2025-05-25 06:22:59] 2025-05-25 10:22:41,485 | INFO     | sum of square deviations: 8288700622.916355
[2025-05-25 06:22:59] 2025-05-25 10:22:41,487 | INFO     | sum of deviations: 21852476861.076912
[2025-05-25 06:22:59] 2025-05-25 10:22:41,488 | INFO     | mean x: 1748158755.0167224
[2025-05-25 06:22:59] 2025-05-25 10:22:41,488 | INFO     | mean y: 2134144.3846153845
[2025-05-25 06:22:59] 2025-05-25 10:22:41,488 | INFO     | -- intersect: -4606742503.647923
[2025-05-25 06:22:59] 2025-05-25 10:22:41,488 | INFO     | intersect: -4606742503.647923
[2025-05-25 06:22:59] 2025-05-25 10:22:41,505 | INFO     | chi2: 0.1255440596764759
[2025-05-25 06:22:59] 2025-05-25 10:22:41,506 | INFO     | -- intersect: -4606742503.647923
[2025-05-25 06:22:59] 2025-05-25 10:22:41,506 | INFO     | current memory leak: 2.64 B/s (using 299 data points, chi2=0.13)
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | ..............................
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . Timing measurements:
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . get job = 0 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . initial setup = 3 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . payload setup = 13 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . stage-in = 0 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . payload execution = 20096 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . stage-out = 3 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | . log creation = 0 s
[2025-05-25 06:22:59] 2025-05-25 10:22:41,507 | INFO     | ..............................
[2025-05-25 06:22:59] 2025-05-25 10:22:42,311 | INFO     | 
[2025-05-25 06:22:59] 2025-05-25 10:22:42,311 | INFO     | job summary report
[2025-05-25 06:22:59] 2025-05-25 10:22:42,311 | INFO     | --------------------------------------------------
[2025-05-25 06:22:59] 2025-05-25 10:22:42,311 | INFO     | PanDA job id: 6665631652
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | task id: 44871837
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | errors: (none)
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | pilot state: finished 
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | transexitcode: 0
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | exeerrorcode: 0
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | exeerrordiag: 
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | exitcode: 0
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | exitmsg: OK
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | cpuconsumptiontime: 50881 s
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | nevents: 400
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | neventsw: 0
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | pid: 2065301
[2025-05-25 06:22:59] 2025-05-25 10:22:42,312 | INFO     | pgrp: 2065301
[2025-05-25 06:22:59] 2025-05-25 10:22:42,313 | INFO     | corecount: 8
[2025-05-25 06:22:59] 2025-05-25 10:22:42,313 | INFO     | event service: False
[2025-05-25 06:22:59] 2025-05-25 10:22:42,313 | INFO     | sizes: {0: 2393512, 1: 2393596, 2: 2393795, 3: 2393795, 11: 2394029, 14: 2394057, 20115: 2427105, 20116: 2427104, 20122: 2436157, 20146: 2436271}
[2025-05-25 06:22:59] 2025-05-25 10:22:42,313 | INFO     | --------------------------------------------------
[2025-05-25 06:22:59] 2025-05-25 10:22:42,313 | INFO     | 
[2025-05-25 06:22:59] 2025-05-25 10:22:42,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-25 06:22:59] 2025-05-25 10:22:42,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | job 6665631652 has completed (purged errors)
[2025-05-25 06:22:59] 2025-05-25 10:22:42,540 | INFO     | overall cleanup function is called
[2025-05-25 06:22:59] 2025-05-25 10:22:43,568 | INFO     | --- collectZombieJob: --- 10, [2065301]
[2025-05-25 06:22:59] 2025-05-25 10:22:43,568 | INFO     | zombie collector waiting for pid 2065301
[2025-05-25 06:22:59] 2025-05-25 10:22:43,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 06:22:59] 2025-05-25 10:22:43,569 | INFO     | collected zombie processes
[2025-05-25 06:22:59] 2025-05-25 10:22:43,569 | INFO     | will attempt to kill all subprocesses of pid=2065301
[2025-05-25 06:22:59] 2025-05-25 10:22:44,660 | INFO     | process IDs to be killed: [2065301] (in reverse order)
[2025-05-25 06:22:59] 2025-05-25 10:22:45,139 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 06:22:59] 2025-05-25 10:22:45,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 06:22:59] 2025-05-25 10:22:45,157 | INFO     | did not find any defunct processes belonging to 2065301
[2025-05-25 06:22:59] 2025-05-25 10:22:45,240 | INFO     | did not find any defunct processes belonging to 2065301
[2025-05-25 06:22:59] 2025-05-25 10:22:45,241 | INFO     | ready for new job
[2025-05-25 06:22:59] 2025-05-25 10:22:45,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 06:22:59] 2025-05-25 10:22:45,266 | INFO     | **************************************
[2025-05-25 06:22:59] 2025-05-25 10:22:45,266 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 06:22:59] 2025-05-25 10:22:45,266 | INFO     | **************************************
[2025-05-25 06:22:59] 2025-05-25 10:22:45,266 | INFO     | 
[2025-05-25 06:22:59] 2025-05-25 10:22:45,306 | INFO     | architecture information:
[2025-05-25 06:22:59] 2025-05-25 10:22:45,307 | INFO     | executing command: cat /etc/os-release
[2025-05-25 06:22:59] 2025-05-25 10:22:45,396 | INFO     | cat /etc/os-release:
[2025-05-25 06:22:59] NAME="CentOS Linux"
[2025-05-25 06:22:59] VERSION="7 (Core)"
[2025-05-25 06:22:59] ID="centos"
[2025-05-25 06:22:59] ID_LIKE="rhel fedora"
[2025-05-25 06:22:59] VERSION_ID="7"
[2025-05-25 06:22:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 06:22:59] ANSI_COLOR="0;31"
[2025-05-25 06:22:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 06:22:59] HOME_URL="https://www.centos.org/"
[2025-05-25 06:22:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 06:22:59] 
[2025-05-25 06:22:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 06:22:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 06:22:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 06:22:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 06:22:59] 
[2025-05-25 06:22:59] 2025-05-25 10:22:45,397 | INFO     | **************************************
[2025-05-25 06:22:59] 2025-05-25 10:22:45,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-25 06:22:59] 2025-05-25 10:22:46,018 | INFO     | sufficient remaining disk space (93409247232 B)
[2025-05-25 06:22:59] 2025-05-25 10:22:46,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 06:22:59] 2025-05-25 10:22:46,019 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 06:22:59] 2025-05-25 10:22:46,019 | INFO     | update_server=False
[2025-05-25 06:22:59] 2025-05-25 10:22:46,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 06:22:59] 2025-05-25 10:22:46,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 06:22:59] 2025-05-25 10:22:46,273 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 06:22:59] 2025-05-25 10:22:46,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 06:22:59] 2025-05-25 10:22:46,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 06:22:59] 2025-05-25 10:22:46,354 | INFO     | all data control threads have been joined
[2025-05-25 06:22:59] 2025-05-25 10:22:46,657 | INFO     | all payload control threads have been joined
[2025-05-25 06:22:59] 2025-05-25 10:22:46,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 06:22:59] 2025-05-25 10:22:46,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:22:59] 2025-05-25 10:22:46,895 | INFO     | aborting loop
[2025-05-25 06:22:59] 2025-05-25 10:22:47,025 | INFO     | [job] retrieve thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,260 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,265 | INFO     | all job control threads have been joined
[2025-05-25 06:22:59] 2025-05-25 10:22:47,369 | INFO     | [data] control thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:22:59] 2025-05-25 10:22:47,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,671 | INFO     | [payload] control thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,703 | INFO     | [data] copytool_in thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,824 | INFO     | [job] validate thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,901 | INFO     | [job] job monitor thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:47,951 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:48,039 | INFO     | [data] copytool_out thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:48,052 | INFO     | [payload] failed_post thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:48,178 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:48,207 | INFO     | [payload] validate_post thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:48,271 | INFO     | [job] control thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:48,397 | INFO     | [job] queue monitor thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:50,765 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 06:22:59] 2025-05-25 10:22:52,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812665710400)>', '<ExcThread(monitor, started 139812140979968)>']
[2025-05-25 06:22:59] 2025-05-25 10:22:53,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 06:22:59] 2025-05-25 10:22:53,314 | INFO     | [monitor] control thread has ended
[2025-05-25 06:22:59] 2025-05-25 10:22:57,433 | INFO     | all workflow threads have been joined
[2025-05-25 06:22:59] 2025-05-25 10:22:57,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 06:22:59] 2025-05-25 10:22:57,434 | INFO     | traces error code: 0
[2025-05-25 06:22:59] 2025-05-25 10:22:57,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 06:22:59] 2025-05-25 10:22:58,224 [wrapper] ==== pilot stdout END ====
[2025-05-25 06:22:59] 2025-05-25 10:22:58,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 06:22:59] 2025-05-25 10:22:58,264 [wrapper] pilotpid: 2022931
[2025-05-25 06:22:59] 2025-05-25 10:22:58,282 [wrapper] Pilot exit status: 0
[2025-05-25 06:22:59] 2025-05-25 10:22:58,356 [wrapper] pandaids: 6665631652 6665631652
[2025-05-25 06:22:59] 2025-05-25 10:22:58,501 [wrapper] cleanup supervisor_pilot 3716039 2022932
[2025-05-25 06:22:59] 2025-05-25 10:22:58,516 [wrapper] Test setup, not cleaning
[2025-05-25 06:22:59] 2025-05-25 10:22:58,534 [wrapper] apfmon messages muted
[2025-05-25 06:22:59] 2025-05-25 10:22:58,581 [wrapper] ==== wrapper stdout END ====
[2025-05-25 06:22:59] 2025-05-25 10:22:58,595 [wrapper] ==== wrapper stderr END ====
[2025-05-25 06:22:59]  *** Error codes and diagnostics ***
[2025-05-25 06:22:59]     "exeErrorCode": 0,
[2025-05-25 06:22:59]     "exeErrorDiag": "",
[2025-05-25 06:22:59]     "pilotErrorCode": 0,
[2025-05-25 06:22:59]     "pilotErrorDiag": "",
[2025-05-25 06:22:59]  *** Listing of results directory ***
[2025-05-25 06:22:59] total 627440
[2025-05-25 06:22:59] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas      5111 May 24 11:28 queuedata.json
[2025-05-25 06:22:59] -rwx------. 1 boincer umatlas     37140 May 24 11:30 runpilot2-wrapper.sh
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas    495897 May 24 11:30 pilot3.tar.gz
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas       100 May 24 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 06:22:59] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 21:21 run_atlas
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas       105 May 24 21:21 job.xml
[2025-05-25 06:22:59] -rw-r--r--. 3 boincer umatlas 222339866 May 24 21:22 EVNT.44871834._000786.pool.root.1
[2025-05-25 06:22:59] -rw-r--r--. 3 boincer umatlas 222339866 May 24 21:22 ATLAS.root_0
[2025-05-25 06:22:59] -rw-r--r--. 2 boincer umatlas     15093 May 24 21:22 start_atlas.sh
[2025-05-25 06:22:59] drwxrwx--x. 2 boincer umatlas      4096 May 24 21:22 shared
[2025-05-25 06:22:59] -rw-r--r--. 2 boincer umatlas    508871 May 24 21:22 input.tar.gz
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas         0 May 24 21:22 boinc_lockfile
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas      2558 May 25 00:46 pandaJob.out
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas    990803 May 25 00:46 agis_schedconf.cvmfs.json
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas      6857 May 25 06:19 init_data.xml
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas 189799454 May 25 06:20 HITS.44871837._019709.pool.root.1
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas       531 May 25 06:21 boinc_task_state.xml
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas      1054 May 25 06:22 memory_monitor_summary.json
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas   1596740 May 25 06:22 agis_ddmendpoints.agis.ALL.json
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas    447806 May 25 06:22 log.44871837._019709.job.log.tgz.1
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas        96 May 25 06:22 pilot_heartbeat.json
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas      7746 May 25 06:22 heartbeat.json
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas      8192 May 25 06:22 boinc_mmap_file
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas        28 May 25 06:22 wrapper_checkpoint.txt
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas      4353 May 25 06:22 pilotlog.txt
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas   1646593 May 25 06:22 log.44871837._019709.job.log.1
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas       357 May 25 06:22 output.list
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas       620 May 25 06:22 runtime_log
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas   2109440 May 25 06:22 result.tar.gz
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas      8750 May 25 06:22 runtime_log.err
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas       785 May 25 06:22 3xMODmO05c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQrRKDmSCSmxm.diag
[2025-05-25 06:22:59] -rw-r--r--. 1 boincer umatlas     23083 May 25 06:22 stderr.txt
[2025-05-25 06:22:59] HITS file was successfully produced:
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas 189799454 May 25 06:20 shared/HITS.pool.root.1
[2025-05-25 06:22:59]  *** Contents of shared directory: ***
[2025-05-25 06:22:59] total 405064
[2025-05-25 06:22:59] -rw-r--r--. 3 boincer umatlas 222339866 May 24 21:22 ATLAS.root_0
[2025-05-25 06:22:59] -rw-r--r--. 2 boincer umatlas     15093 May 24 21:22 start_atlas.sh
[2025-05-25 06:22:59] -rw-r--r--. 2 boincer umatlas    508871 May 24 21:22 input.tar.gz
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas 189799454 May 25 06:20 HITS.pool.root.1
[2025-05-25 06:22:59] -rw-------. 1 boincer umatlas   2109440 May 25 06:22 result.tar.gz
06:23:00 (2001185): run_atlas exited; CPU time 51763.076769
06:23:00 (2001185): called boinc_finish(0)

</stderr_txt>
]]>

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