Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:28 (2316931): wrapper (7.7.26015): starting
18:07:28 (2316931): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 18:07:28] Arguments: --nthreads 12
[2025-05-24 18:07:28] Threads: 12
[2025-05-24 18:07:28] Checking for CVMFS
[2025-05-24 18:07:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 18:07:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 18:07:28] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 18:07:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 18:07:29] 2.11.5.0 1966092 8587 250084 146384 3 394 36137711 45568001 15229 130560 0 57892627 99.721 49724129 26330 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 18:07:29] CVMFS is ok
[2025-05-24 18:07:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 18:07:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 18:07:29] Further information can be found at the LHC@home message board.
[2025-05-24 18:07:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 18:07:29] Checking for apptainer binary...
[2025-05-24 18:07:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 18:07:29] Running /usr/bin/apptainer --version
[2025-05-24 18:07:29] apptainer version 1.4.0-1.el9
[2025-05-24 18:07:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 18:07:29] wns0138.triumf.lcg
[2025-05-24 18:07:29] apptainer works
[2025-05-24 18:07:29] Set ATHENA_PROC_NUMBER=12
[2025-05-24 18:07:29] Set ATHENA_CORE_NUMBER=12
[2025-05-24 18:07:29] Starting ATLAS job with PandaID=6665681507
[2025-05-24 18:07:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 18:10:41]  *** The last 200 lines of the pilot log: ***
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | INFO     | extracted standard info from prmon json
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | found no stored workdir sizes
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | WARNING  | wrong length of table data, x=[1748135286.0], y=[675.0] (must be same and length>=4)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | ..............................
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . Timing measurements:
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . get job = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . initial setup = 3 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . payload setup = 5 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . stage-in = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . payload execution = 17 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | . stage-out = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | . log creation = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | ..............................
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665681507/pilotlog.txt
[2025-05-24 18:10:41] 2025-05-25 01:10:26,488 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 18:10:41] - Log from pilotlog.txt -
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | INFO     | extracted standard info from prmon json
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | found no stored workdir sizes
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | WARNING  | wrong length of table data, x=[1748135286.0], y=[675.0] (must be same and length>=4)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | ..............................
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . Timing measurements:
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . get job = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . initial setup = 3 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . payload setup = 5 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . stage-in = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . payload execution = 17 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | . stage-out = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | . log creation = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | ..............................
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665681507/pilotlog.txt
[2025-05-24 18:10:41] 2025-05-25 01:10:26,489 | WARNING  | 
[2025-05-24 18:10:41] [begin log extracts]
[2025-05-24 18:10:41] - Log from pilotlog.txt -
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | INFO     | extracted standard info from prmon json
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 18:10:41] 2025-05-25 01:10:26,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | WARNING  | found no stored workdir sizes
[2025-05-24 18:10:41] 2025-05-25 01:10:26,474 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | WARNING  | wrong length of table data, x=[1748135286.0], y=[675.0] (must be same and length>=4)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | ..............................
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . Timing measurements:
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . get job = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . initial setup = 3 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . payload setup = 5 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . stage-in = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,475 | INFO     | . payload execution = 17 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | . stage-out = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | . log creation = 0 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | ..............................
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 18:10:41] 2025-05-25 01:10:26,476 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665681507/pilotlog.txt
[2025-05-24 18:10:41] [end log extracts]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,489 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,490 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 18:10:41] 2025-05-25 01:10:26,884 | INFO     | 
[2025-05-24 18:10:41] 2025-05-25 01:10:26,885 | INFO     | job summary report
[2025-05-24 18:10:41] 2025-05-25 01:10:26,885 | INFO     | --------------------------------------------------
[2025-05-24 18:10:41] 2025-05-25 01:10:26,885 | INFO     | PanDA job id: 6665681507
[2025-05-24 18:10:41] 2025-05-25 01:10:26,885 | INFO     | task id: 44871837
[2025-05-24 18:10:41] 2025-05-25 01:10:26,885 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 18:08:14,378 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | pilot state: failed 
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | transexitcode: 65
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | exeerrorcode: 65
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | exitcode: 65
[2025-05-24 18:10:41] 2025-05-25 01:10:26,886 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | cpuconsumptiontime: 19 s
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | nevents: 0
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | neventsw: 0
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | pid: 2327443
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | pgrp: 2327443
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | corecount: 12
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | event service: False
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | sizes: {0: 2393736, 1: 2393764, 5: 2393970, 11: 2394026, 27: 2417210, 29: 2421445, 32: 2421601, 152: 2421743}
[2025-05-24 18:10:41] 2025-05-25 01:10:26,887 | INFO     | --------------------------------------------------
[2025-05-24 18:10:41] 2025-05-25 01:10:26,888 | INFO     | 
[2025-05-24 18:10:41] 2025-05-25 01:10:26,888 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 18:10:41] 2025-05-25 01:10:26,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 18:10:41] 2025-05-25 01:10:26,912 | INFO     | job 6665681507 has completed (purged errors)
[2025-05-24 18:10:41] 2025-05-25 01:10:26,912 | INFO     | overall cleanup function is called
[2025-05-24 18:10:41] 2025-05-25 01:10:27,918 | INFO     | --- collectZombieJob: --- 10, [2327443]
[2025-05-24 18:10:41] 2025-05-25 01:10:27,919 | INFO     | zombie collector waiting for pid 2327443
[2025-05-24 18:10:41] 2025-05-25 01:10:27,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 18:10:41] 2025-05-25 01:10:27,919 | INFO     | collected zombie processes
[2025-05-24 18:10:41] 2025-05-25 01:10:27,919 | INFO     | will attempt to kill all subprocesses of pid=2327443
[2025-05-24 18:10:41] 2025-05-25 01:10:28,143 | INFO     | process IDs to be killed: [2327443] (in reverse order)
[2025-05-24 18:10:41] 2025-05-25 01:10:28,223 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 18:10:41] 2025-05-25 01:10:28,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 18:10:41] 2025-05-25 01:10:28,236 | INFO     | did not find any defunct processes belonging to 2327443
[2025-05-24 18:10:41] 2025-05-25 01:10:28,245 | INFO     | did not find any defunct processes belonging to 2327443
[2025-05-24 18:10:41] 2025-05-25 01:10:28,245 | INFO     | ready for new job
[2025-05-24 18:10:41] 2025-05-25 01:10:28,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 18:10:41] 2025-05-25 01:10:28,247 | INFO     | **************************************
[2025-05-24 18:10:41] 2025-05-25 01:10:28,247 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 18:10:41] 2025-05-25 01:10:28,247 | INFO     | **************************************
[2025-05-24 18:10:41] 2025-05-25 01:10:28,247 | INFO     | 
[2025-05-24 18:10:41] 2025-05-25 01:10:28,249 | INFO     | architecture information:
[2025-05-24 18:10:41] 2025-05-25 01:10:28,250 | INFO     | executing command: cat /etc/os-release
[2025-05-24 18:10:41] 2025-05-25 01:10:28,264 | INFO     | cat /etc/os-release:
[2025-05-24 18:10:41] NAME="CentOS Linux"
[2025-05-24 18:10:41] VERSION="7 (Core)"
[2025-05-24 18:10:41] ID="centos"
[2025-05-24 18:10:41] ID_LIKE="rhel fedora"
[2025-05-24 18:10:41] VERSION_ID="7"
[2025-05-24 18:10:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 18:10:41] ANSI_COLOR="0;31"
[2025-05-24 18:10:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 18:10:41] HOME_URL="https://www.centos.org/"
[2025-05-24 18:10:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 18:10:41] 
[2025-05-24 18:10:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 18:10:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 18:10:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 18:10:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 18:10:41] 
[2025-05-24 18:10:41] 2025-05-25 01:10:28,264 | INFO     | **************************************
[2025-05-24 18:10:41] 2025-05-25 01:10:28,767 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 18:10:41] 2025-05-25 01:10:28,784 | INFO     | sufficient remaining disk space (2184206876672 B)
[2025-05-24 18:10:41] 2025-05-25 01:10:28,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 18:10:41] 2025-05-25 01:10:28,784 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 18:10:41] 2025-05-25 01:10:28,784 | INFO     | update_server=False
[2025-05-24 18:10:41] 2025-05-25 01:10:28,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 18:10:41] 2025-05-25 01:10:28,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 18:10:41] 2025-05-25 01:10:28,796 | INFO     | aborting loop
[2025-05-24 18:10:41] 2025-05-25 01:10:28,843 | INFO     | all job control threads have been joined
[2025-05-24 18:10:41] 2025-05-25 01:10:28,944 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 18:10:41] 2025-05-25 01:10:28,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 18:10:41] 2025-05-25 01:10:28,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 18:10:41] 2025-05-25 01:10:29,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 18:10:41] 2025-05-25 01:10:29,790 | INFO     | [job] retrieve thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:29,801 | INFO     | [job] job monitor thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:29,849 | INFO     | [job] control thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:29,858 | INFO     | [payload] failed_post thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:29,874 | INFO     | [data] copytool_in thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:29,892 | INFO     | all data control threads have been joined
[2025-05-24 18:10:41] 2025-05-25 01:10:30,136 | INFO     | all payload control threads have been joined
[2025-05-24 18:10:41] 2025-05-25 01:10:30,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 18:10:41] 2025-05-25 01:10:30,364 | INFO     | [payload] validate_post thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:30,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:30,762 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:30,897 | INFO     | [data] control thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:30,984 | INFO     | [job] validate thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:31,141 | INFO     | [payload] control thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:31,238 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:31,260 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:31,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 18:10:41] 2025-05-25 01:10:31,608 | INFO     | [data] copytool_out thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:32,587 | INFO     | [job] queue monitor thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:34,167 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 18:10:41] 2025-05-25 01:10:36,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012560070464)>', '<ExcThread(monitor, started 140012024747776)>']
[2025-05-24 18:10:41] 2025-05-25 01:10:36,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 18:10:41] 2025-05-25 01:10:36,989 | INFO     | [monitor] control thread has ended
[2025-05-24 18:10:41] 2025-05-25 01:10:41,171 | INFO     | all workflow threads have been joined
[2025-05-24 18:10:41] 2025-05-25 01:10:41,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 18:10:41] 2025-05-25 01:10:41,173 | INFO     | traces error code: 0
[2025-05-24 18:10:41] 2025-05-25 01:10:41,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 18:10:41] 2025-05-25 01:10:41,311 [wrapper] ==== pilot stdout END ====
[2025-05-24 18:10:41] 2025-05-25 01:10:41,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 18:10:41] 2025-05-25 01:10:41,319 [wrapper] pilotpid: 2321130
[2025-05-24 18:10:41] 2025-05-25 01:10:41,322 [wrapper] Pilot exit status: 0
[2025-05-24 18:10:41] 2025-05-25 01:10:41,333 [wrapper] pandaids: 6665681507
[2025-05-24 18:10:41] 2025-05-25 01:10:41,386 [wrapper] cleanup supervisor_pilot 2321136 2321131
[2025-05-24 18:10:41] 2025-05-25 01:10:41,391 [wrapper] Test setup, not cleaning
[2025-05-24 18:10:41] 2025-05-25 01:10:41,394 [wrapper] apfmon messages muted
[2025-05-24 18:10:41] 2025-05-25 01:10:41,397 [wrapper] ==== wrapper stdout END ====
[2025-05-24 18:10:41] 2025-05-25 01:10:41,400 [wrapper] ==== wrapper stderr END ====
[2025-05-24 18:10:41]  *** Error codes and diagnostics ***
[2025-05-24 18:10:41]     "exeErrorCode": 65,
[2025-05-24 18:10:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 18:10:41]     "pilotErrorCode": 1305,
[2025-05-24 18:10:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 18:10:41]  *** Listing of results directory ***
[2025-05-24 18:10:41] total 223388
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc    495897 May 24 14:53 pilot3.tar.gz
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc      5111 May 24 15:07 queuedata.json
[2025-05-24 18:10:41] -rwx------. 1 boinc boinc     37140 May 24 15:08 runpilot2-wrapper.sh
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc       100 May 24 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 18:10:41] -rwxr-xr-x. 1 boinc boinc      7986 May 24 18:07 run_atlas
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc       105 May 24 18:07 job.xml
[2025-05-24 18:10:41] -rw-r--r--. 2 boinc boinc 224732687 May 24 18:07 EVNT.44871834._000991.pool.root.1
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc      6598 May 24 18:07 init_data.xml
[2025-05-24 18:10:41] -rw-r--r--. 2 boinc boinc     15093 May 24 18:07 start_atlas.sh
[2025-05-24 18:10:41] drwxrwx--x. 2 boinc boinc      4096 May 24 18:07 shared
[2025-05-24 18:10:41] -rw-r--r--. 2 boinc boinc    508872 May 24 18:07 input.tar.gz
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc         0 May 24 18:07 boinc_lockfile
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc      2558 May 24 18:07 pandaJob.out
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc    990811 May 24 18:07 agis_schedconf.cvmfs.json
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc   1596740 May 24 18:07 agis_ddmendpoints.agis.ALL.json
[2025-05-24 18:10:41] drwx------. 4 boinc boinc      4096 May 24 18:07 pilot3
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc       944 May 24 18:08 memory_monitor_summary.json
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc     20716 May 24 18:08 log.44871837._024867.job.log.tgz.1
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc        95 May 24 18:09 pilot_heartbeat.json
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc      8329 May 24 18:10 heartbeat.json
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc       523 May 24 18:10 boinc_task_state.xml
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc        22 May 24 18:10 wrapper_checkpoint.txt
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc      8192 May 24 18:10 boinc_mmap_file
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc      4352 May 24 18:10 pilotlog.txt
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc     73130 May 24 18:10 log.44871837._024867.job.log.1
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc       188 May 24 18:10 output.list
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc       620 May 24 18:10 runtime_log
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc    112640 May 24 18:10 result.tar.gz
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc       644 May 24 18:10 usVKDmPDCd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQiSKDmXCjPOn.diag
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc      8484 May 24 18:10 runtime_log.err
[2025-05-24 18:10:41] -rw-r--r--. 1 boinc boinc     21445 May 24 18:10 stderr.txt
[2025-05-24 18:10:41] No HITS result produced
[2025-05-24 18:10:41]  *** Contents of shared directory: ***
[2025-05-24 18:10:41] total 220096
[2025-05-24 18:10:41] -rw-r--r--. 2 boinc boinc 224732687 May 24 18:07 ATLAS.root_0
[2025-05-24 18:10:41] -rw-r--r--. 2 boinc boinc     15093 May 24 18:07 start_atlas.sh
[2025-05-24 18:10:41] -rw-r--r--. 2 boinc boinc    508872 May 24 18:07 input.tar.gz
[2025-05-24 18:10:41] -rw-------. 1 boinc boinc    112640 May 24 18:10 result.tar.gz
18:10:43 (2316931): run_atlas exited; CPU time 23.864548
18:10:43 (2316931): called boinc_finish(0)

</stderr_txt>
]]>

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