Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:48:07 (3042542): wrapper (7.7.26015): starting
21:48:07 (3042542): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 21:48:07] Arguments: --nthreads 8
[2025-05-24 21:48:07] Threads: 8
[2025-05-24 21:48:07] Checking for CVMFS
[2025-05-24 21:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 21:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 21:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 21:48:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 21:48:10] 2.12.6.0 1669502 129702 1100648 146385 2 299 31521236 32935936 34408 130560 2 649737864 99.697 507753026 11911 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 21:48:10] CVMFS is ok
[2025-05-24 21:48:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 21:48:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 21:48:10] Further information can be found at the LHC@home message board.
[2025-05-24 21:48:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 21:48:10] Checking for apptainer binary...
[2025-05-24 21:48:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 21:48:10] Running /usr/bin/apptainer --version
[2025-05-24 21:48:10] apptainer version 1.4.1-1.el9
[2025-05-24 21:48:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 21:48:11] lc-12-33.aglt2.org
[2025-05-24 21:48:11] apptainer works
[2025-05-24 21:48:11] Set ATHENA_PROC_NUMBER=8
[2025-05-24 21:48:11] Set ATHENA_CORE_NUMBER=8
[2025-05-24 21:48:11] Starting ATLAS job with PandaID=6665677961
[2025-05-24 21:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 01:29:54]  *** The last 200 lines of the pilot log: ***
[2025-05-25 01:29:54] 2025-05-25 05:29:34,801 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 01:29:54] 2025-05-25 05:29:34,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 01:29:54] 2025-05-25 05:29:34,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 01:29:54] 2025-05-25 05:29:34,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 01:29:54] 2025-05-25 05:29:34,832 | INFO     | fitting pss+swap vs Time
[2025-05-25 01:29:54] 2025-05-25 05:29:34,833 | INFO     | sum of square deviations: 3038889808.5841174
[2025-05-25 01:29:54] 2025-05-25 05:29:34,874 | INFO     | sum of deviations: 55245366063.59341
[2025-05-25 01:29:54] 2025-05-25 05:29:34,874 | INFO     | mean x: 1748144366.5654206
[2025-05-25 01:29:54] 2025-05-25 05:29:34,874 | INFO     | mean y: 2102554.35046729
[2025-05-25 01:29:54] 2025-05-25 05:29:34,875 | INFO     | -- intersect: -31778212477.181545
[2025-05-25 01:29:54] 2025-05-25 05:29:34,875 | INFO     | intersect: -31778212477.181545
[2025-05-25 01:29:54] 2025-05-25 05:29:34,875 | INFO     | chi2: 2.4773312101081717
[2025-05-25 01:29:54] 2025-05-25 05:29:34,875 | INFO     | sum of square deviations: 2830825061.062195
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | sum of deviations: 55833260492.20099
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | mean x: 1748144214.0669856
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | mean y: 2102980.985645933
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | -- intersect: -34477099787.309875
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | intersect: -34477099787.309875
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | chi2: 2.4664798940099333
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | current chi2=2.4664798940099333 (change=0.4380244375060611 %)
[2025-05-25 01:29:54] 2025-05-25 05:29:34,877 | INFO     | right removable region: 208
[2025-05-25 01:29:54] 2025-05-25 05:29:34,878 | INFO     | sum of square deviations: 2830816521.062195
[2025-05-25 01:29:54] 2025-05-25 05:29:34,888 | INFO     | sum of deviations: 12746175733.94259
[2025-05-25 01:29:54] 2025-05-25 05:29:34,888 | INFO     | mean x: 1748144519.0669856
[2025-05-25 01:29:54] 2025-05-25 05:29:34,888 | INFO     | mean y: 2133575.861244019
[2025-05-25 01:29:54] 2025-05-25 05:29:34,888 | INFO     | -- intersect: -7869149173.327854
[2025-05-25 01:29:54] 2025-05-25 05:29:34,889 | INFO     | intersect: -7869149173.327854
[2025-05-25 01:29:54] 2025-05-25 05:29:34,889 | INFO     | chi2: 0.2636268226615561
[2025-05-25 01:29:54] 2025-05-25 05:29:34,889 | INFO     | current chi2=0.2636268226615561 (change=89.35843452882327 %)
[2025-05-25 01:29:54] 2025-05-25 05:29:34,889 | INFO     | sum of square deviations: 2632464346.0392165
[2025-05-25 01:29:54] 2025-05-25 05:29:34,890 | INFO     | sum of deviations: 4529491191.745097
[2025-05-25 01:29:54] 2025-05-25 05:29:34,891 | INFO     | mean x: 1748144671.5686274
[2025-05-25 01:29:54] 2025-05-25 05:29:34,891 | INFO     | mean y: 2139820.0539215687
[2025-05-25 01:29:54] 2025-05-25 05:29:34,891 | INFO     | -- intersect: -3005766404.271543
[2025-05-25 01:29:54] 2025-05-25 05:29:34,891 | INFO     | intersect: -3005766404.271543
[2025-05-25 01:29:54] 2025-05-25 05:29:34,891 | INFO     | chi2: 0.1375425763670807
[2025-05-25 01:29:54] 2025-05-25 05:29:34,891 | INFO     | current chi2=0.1375425763670807 (change=47.82678978623593 %)
[2025-05-25 01:29:54] 2025-05-25 05:29:34,914 | INFO     | sum of square deviations: 2443600721.0150685
[2025-05-25 01:29:54] 2025-05-25 05:29:34,915 | INFO     | sum of deviations: -907165656.783922
[2025-05-25 01:29:54] 2025-05-25 05:29:34,915 | INFO     | mean x: 1748144824.0703518
[2025-05-25 01:29:54] 2025-05-25 05:29:34,915 | INFO     | mean y: 2144210.341708543
[2025-05-25 01:29:54] 2025-05-25 05:29:34,915 | INFO     | -- intersect: 651127873.6066431
[2025-05-25 01:29:54] 2025-05-25 05:29:34,915 | INFO     | intersect: 651127873.6066431
[2025-05-25 01:29:54] 2025-05-25 05:29:34,916 | INFO     | chi2: 0.1041668266865723
[2025-05-25 01:29:54] 2025-05-25 05:29:34,916 | INFO     | current chi2=0.1041668266865723 (change=24.26575869237281 %)
[2025-05-25 01:29:54] 2025-05-25 05:29:34,916 | INFO     | left removable region: 30
[2025-05-25 01:29:54] 2025-05-25 05:29:34,916 | INFO     | sum of square deviations: 1748761157.5505564
[2025-05-25 01:29:54] 2025-05-25 05:29:34,917 | INFO     | sum of deviations: -3845240922.1797748
[2025-05-25 01:29:54] 2025-05-25 05:29:34,917 | INFO     | mean x: 1748145098.5730338
[2025-05-25 01:29:54] 2025-05-25 05:29:34,917 | INFO     | mean y: 2150655.629213483
[2025-05-25 01:29:54] 2025-05-25 05:29:34,917 | INFO     | -- intersect: 3846036964.469929
[2025-05-25 01:29:54] 2025-05-25 05:29:34,917 | INFO     | intersect: 3846036964.469929
[2025-05-25 01:29:54] 2025-05-25 05:29:34,954 | INFO     | chi2: 0.07255645449166376
[2025-05-25 01:29:54] 2025-05-25 05:29:34,954 | INFO     | -- intersect: 3846036964.469929
[2025-05-25 01:29:54] 2025-05-25 05:29:34,954 | INFO     | current memory leak: -2.20 B/s (using 178 data points, chi2=0.07)
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | ..............................
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | . Timing measurements:
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | . get job = 0 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | . initial setup = 4 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | . payload setup = 32 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | . stage-in = 0 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,955 | INFO     | . payload execution = 13079 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,956 | INFO     | . stage-out = 5 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,956 | INFO     | . log creation = 0 s
[2025-05-25 01:29:54] 2025-05-25 05:29:34,956 | INFO     | ..............................
[2025-05-25 01:29:54] 2025-05-25 05:29:35,940 | INFO     | 
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | job summary report
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | --------------------------------------------------
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | PanDA job id: 6665677961
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | task id: 44871837
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | errors: (none)
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | pilot state: finished 
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | transexitcode: 0
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | exeerrorcode: 0
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | exeerrordiag: 
[2025-05-25 01:29:54] 2025-05-25 05:29:35,941 | INFO     | exitcode: 0
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | exitmsg: OK
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | cpuconsumptiontime: 54527 s
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | nevents: 400
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | neventsw: 0
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | pid: 3081115
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | pgrp: 3081115
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | corecount: 8
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | event service: False
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | sizes: {0: 2392911, 1: 2393596, 2: 2393795, 3: 2393823, 14: 2393823, 25: 2393851, 28: 2394213, 36: 2394241, 13117: 2423744, 13118: 2423743, 13125: 2433076, 13166: 
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | --------------------------------------------------
[2025-05-25 01:29:54] 2025-05-25 05:29:35,942 | INFO     | 
[2025-05-25 01:29:54] 2025-05-25 05:29:35,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-25 01:29:54] 2025-05-25 05:29:36,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | job 6665677961 has completed (purged errors)
[2025-05-25 01:29:54] 2025-05-25 05:29:36,213 | INFO     | overall cleanup function is called
[2025-05-25 01:29:54] 2025-05-25 05:29:37,234 | INFO     | --- collectZombieJob: --- 10, [3081115]
[2025-05-25 01:29:54] 2025-05-25 05:29:37,234 | INFO     | zombie collector waiting for pid 3081115
[2025-05-25 01:29:54] 2025-05-25 05:29:37,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 01:29:54] 2025-05-25 05:29:37,234 | INFO     | collected zombie processes
[2025-05-25 01:29:54] 2025-05-25 05:29:37,234 | INFO     | will attempt to kill all subprocesses of pid=3081115
[2025-05-25 01:29:54] 2025-05-25 05:29:39,412 | INFO     | PID=3061316 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 01:29:54] 2025-05-25 05:29:39,413 | INFO     | .. there are 82 such processes running
[2025-05-25 01:29:54] 2025-05-25 05:29:40,442 | INFO     | process IDs to be killed: [3081115] (in reverse order)
[2025-05-25 01:29:54] 2025-05-25 05:29:40,913 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 01:29:54] 2025-05-25 05:29:40,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 01:29:54] 2025-05-25 05:29:41,001 | INFO     | did not find any defunct processes belonging to 3081115
[2025-05-25 01:29:54] 2025-05-25 05:29:41,028 | INFO     | did not find any defunct processes belonging to 3081115
[2025-05-25 01:29:54] 2025-05-25 05:29:41,028 | INFO     | ready for new job
[2025-05-25 01:29:54] 2025-05-25 05:29:41,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 01:29:54] 2025-05-25 05:29:41,031 | INFO     | **************************************
[2025-05-25 01:29:54] 2025-05-25 05:29:41,032 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 01:29:54] 2025-05-25 05:29:41,032 | INFO     | **************************************
[2025-05-25 01:29:54] 2025-05-25 05:29:41,032 | INFO     | 
[2025-05-25 01:29:54] 2025-05-25 05:29:41,054 | INFO     | architecture information:
[2025-05-25 01:29:54] 2025-05-25 05:29:41,062 | INFO     | executing command: cat /etc/os-release
[2025-05-25 01:29:54] 2025-05-25 05:29:41,162 | INFO     | cat /etc/os-release:
[2025-05-25 01:29:54] NAME="CentOS Linux"
[2025-05-25 01:29:54] VERSION="7 (Core)"
[2025-05-25 01:29:54] ID="centos"
[2025-05-25 01:29:54] ID_LIKE="rhel fedora"
[2025-05-25 01:29:54] VERSION_ID="7"
[2025-05-25 01:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 01:29:54] ANSI_COLOR="0;31"
[2025-05-25 01:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 01:29:54] HOME_URL="https://www.centos.org/"
[2025-05-25 01:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 01:29:54] 
[2025-05-25 01:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 01:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 01:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 01:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 01:29:54] 
[2025-05-25 01:29:54] 2025-05-25 05:29:41,163 | INFO     | **************************************
[2025-05-25 01:29:54] 2025-05-25 05:29:41,666 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-25 01:29:54] 2025-05-25 05:29:41,734 | INFO     | sufficient remaining disk space (73584869376 B)
[2025-05-25 01:29:54] 2025-05-25 05:29:41,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 01:29:54] 2025-05-25 05:29:41,734 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 01:29:54] 2025-05-25 05:29:41,734 | INFO     | update_server=False
[2025-05-25 01:29:54] 2025-05-25 05:29:41,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 01:29:54] 2025-05-25 05:29:41,735 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 01:29:54] 2025-05-25 05:29:41,735 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 01:29:54] 2025-05-25 05:29:41,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 01:29:54] 2025-05-25 05:29:41,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 01:29:54] 2025-05-25 05:29:41,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 01:29:54] 2025-05-25 05:29:41,894 | INFO     | all payload control threads have been joined
[2025-05-25 01:29:54] 2025-05-25 05:29:42,323 | INFO     | all data control threads have been joined
[2025-05-25 01:29:54] 2025-05-25 05:29:42,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 01:29:54] 2025-05-25 05:29:42,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 01:29:54] 2025-05-25 05:29:42,691 | INFO     | aborting loop
[2025-05-25 01:29:54] 2025-05-25 05:29:42,740 | INFO     | [job] retrieve thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:42,901 | INFO     | [payload] control thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:43,044 | INFO     | all job control threads have been joined
[2025-05-25 01:29:54] 2025-05-25 05:29:43,329 | INFO     | [data] control thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:43,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:43,697 | INFO     | [job] job monitor thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:43,808 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,069 | INFO     | [job] control thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,166 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,171 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,175 | INFO     | [payload] failed_post thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,221 | INFO     | [job] validate thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,229 | INFO     | [data] copytool_in thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,260 | INFO     | [payload] validate_post thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,339 | INFO     | [data] copytool_out thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:44,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 01:29:54] 2025-05-25 05:29:45,605 | INFO     | [job] queue monitor thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:45,747 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 01:29:54] 2025-05-25 05:29:47,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352507258688)>', '<ExcThread(monitor, started 140351721424640)>']
[2025-05-25 01:29:54] 2025-05-25 05:29:47,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 01:29:54] 2025-05-25 05:29:47,790 | INFO     | [monitor] control thread has ended
[2025-05-25 01:29:54] 2025-05-25 05:29:52,321 | INFO     | all workflow threads have been joined
[2025-05-25 01:29:54] 2025-05-25 05:29:52,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 01:29:54] 2025-05-25 05:29:52,327 | INFO     | traces error code: 0
[2025-05-25 01:29:54] 2025-05-25 05:29:52,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 01:29:54] 2025-05-25 05:29:52,796 [wrapper] ==== pilot stdout END ====
[2025-05-25 01:29:54] 2025-05-25 05:29:52,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 01:29:54] 2025-05-25 05:29:52,799 [wrapper] pilotpid: 3061316
[2025-05-25 01:29:54] 2025-05-25 05:29:52,801 [wrapper] Pilot exit status: 0
[2025-05-25 01:29:54] 2025-05-25 05:29:52,912 [wrapper] pandaids: 6665677961
[2025-05-25 01:29:54] 2025-05-25 05:29:53,580 [wrapper] cleanup supervisor_pilot  649420 3061317
[2025-05-25 01:29:54] 2025-05-25 05:29:53,623 [wrapper] Test setup, not cleaning
[2025-05-25 01:29:54] 2025-05-25 05:29:53,672 [wrapper] apfmon messages muted
[2025-05-25 01:29:54] 2025-05-25 05:29:53,681 [wrapper] ==== wrapper stdout END ====
[2025-05-25 01:29:54] 2025-05-25 05:29:53,697 [wrapper] ==== wrapper stderr END ====
[2025-05-25 01:29:54]  *** Error codes and diagnostics ***
[2025-05-25 01:29:54]     "exeErrorCode": 0,
[2025-05-25 01:29:54]     "exeErrorDiag": "",
[2025-05-25 01:29:54]     "pilotErrorCode": 0,
[2025-05-25 01:29:54]     "pilotErrorDiag": "",
[2025-05-25 01:29:54]  *** Listing of results directory ***
[2025-05-25 01:29:54] total 418948
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas    495897 May 24 14:52 pilot3.tar.gz
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas      5111 May 24 15:04 queuedata.json
[2025-05-25 01:29:54] -rwx------. 1 boincer umatlas     37140 May 24 15:05 runpilot2-wrapper.sh
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas       100 May 24 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 01:29:54] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 21:48 run_atlas
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas       105 May 24 21:48 job.xml
[2025-05-25 01:29:54] -rw-r--r--. 2 boincer umatlas 224498071 May 24 21:48 EVNT.44871834._000897.pool.root.1
[2025-05-25 01:29:54] -rw-r--r--. 2 boincer umatlas     15093 May 24 21:48 start_atlas.sh
[2025-05-25 01:29:54] drwxrwx--x. 2 boincer umatlas      4096 May 24 21:48 shared
[2025-05-25 01:29:54] -rw-r--r--. 2 boincer umatlas    508875 May 24 21:48 input.tar.gz
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas         0 May 24 21:48 boinc_lockfile
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas      2558 May 24 21:48 pandaJob.out
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas    990803 May 24 21:49 agis_schedconf.cvmfs.json
[2025-05-25 01:29:54] drwx------. 4 boincer umatlas      4096 May 24 21:49 pilot3
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas 197859444 May 25 01:27 HITS.44871837._022511.pool.root.1
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas       531 May 25 01:27 boinc_task_state.xml
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas      6879 May 25 01:27 init_data.xml
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas      1041 May 25 01:28 memory_monitor_summary.json
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas   1596740 May 25 01:28 agis_ddmendpoints.agis.ALL.json
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas    381350 May 25 01:28 log.44871837._022511.job.log.tgz.1
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas      7725 May 25 01:29 heartbeat.json
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas        95 May 25 01:29 pilot_heartbeat.json
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas      8192 May 25 01:29 boinc_mmap_file
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas        28 May 25 01:29 wrapper_checkpoint.txt
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas      4476 May 25 01:29 pilotlog.txt
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas   1026488 May 25 01:29 log.44871837._022511.job.log.1
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas       357 May 25 01:29 output.list
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas       620 May 25 01:29 runtime_log
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas   1423360 May 25 01:29 result.tar.gz
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas      8660 May 25 01:29 runtime_log.err
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas       656 May 25 01:29 7MQMDmjM9c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWLSKDmabGssm.diag
[2025-05-25 01:29:54] -rw-r--r--. 1 boincer umatlas     21056 May 25 01:29 stderr.txt
[2025-05-25 01:29:54] HITS file was successfully produced:
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas 197859444 May 25 01:27 shared/HITS.pool.root.1
[2025-05-25 01:29:54]  *** Contents of shared directory: ***
[2025-05-25 01:29:54] total 414376
[2025-05-25 01:29:54] -rw-r--r--. 2 boincer umatlas 224498071 May 24 21:48 ATLAS.root_0
[2025-05-25 01:29:54] -rw-r--r--. 2 boincer umatlas     15093 May 24 21:48 start_atlas.sh
[2025-05-25 01:29:54] -rw-r--r--. 2 boincer umatlas    508875 May 24 21:48 input.tar.gz
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas 197859444 May 25 01:27 HITS.pool.root.1
[2025-05-25 01:29:54] -rw-------. 1 boincer umatlas   1423360 May 25 01:29 result.tar.gz
01:29:56 (3042542): run_atlas exited; CPU time 55363.999459
01:29:56 (3042542): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN