Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:52:56 (1806171): wrapper (7.7.26015): starting
14:52:56 (1806171): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 14:52:56] Arguments: --nthreads 6
[2025-05-25 14:52:56] Threads: 6
[2025-05-25 14:52:56] Checking for CVMFS
[2025-05-25 14:52:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 14:52:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 14:52:56] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 14:52:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 14:52:57] 2.11.5.0 1050432 1460 72544 146391 3 187 19243033 20971520 929 130560 0 2052648 99.993 387676 98 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 14:52:57] CVMFS is ok
[2025-05-25 14:52:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 14:52:57] Checking for apptainer binary...
[2025-05-25 14:52:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 14:52:57] Running /usr/bin/apptainer --version
[2025-05-25 14:52:57] apptainer version 1.3.6-1.el9
[2025-05-25 14:52:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 14:52:57] testio006
[2025-05-25 14:52:57] apptainer works
[2025-05-25 14:52:57] Set ATHENA_PROC_NUMBER=6
[2025-05-25 14:52:57] Set ATHENA_CORE_NUMBER=6
[2025-05-25 14:52:57] Starting ATLAS job with PandaID=6665632072
[2025-05-25 14:52:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 16:30:17]  *** The last 200 lines of the pilot log: ***
[2025-05-25 16:30:17]  filetype=log
[2025-05-25 16:30:17]  guid=f11adfcc-5671-4aad-b784-332a4de1f971
[2025-05-25 16:30:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-25 16:30:17]  is_altstaged=None
[2025-05-25 16:30:17]  is_tar=False
[2025-05-25 16:30:17]  lfn=log.44871837._020000.job.log.tgz.1
[2025-05-25 16:30:17]  mtime=0
[2025-05-25 16:30:17]  protocol_id=None
[2025-05-25 16:30:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 16:30:17]  replicas=None
[2025-05-25 16:30:17]  scope=mc23_13p6TeV
[2025-05-25 16:30:17]  status=None
[2025-05-25 16:30:17]  status_code=0
[2025-05-25 16:30:17]  storage_token=
[2025-05-25 16:30:17]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6665632072/log.44871837._020000.job.log.tgz.1
[2025-05-25 16:30:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/56/log.44871837._020000.job.log.tgz.1
[2025-05-25 16:30:17]  workdir=None
[2025-05-25 16:30:17] ]
[2025-05-25 16:30:17] 2025-05-25 07:29:58,938 | INFO     | transferring file log.44871837._020000.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6665632072/log.44871837._020000.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-25 16:30:17] 2025-05-25 07:29:58,938 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6665632072/log.44871837._020000.job.log.tgz.1 /var/lib/boinc/slots/1/log.44871837._020000.job
[2025-05-25 16:30:17] 2025-05-25 07:29:58,949 | INFO     | adding to output.list: log.44871837._020000.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/56/log.44871837._020000.job.log.tg
[2025-05-25 16:30:17] 2025-05-25 07:29:58,950 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 16:30:17] 2025-05-25 07:29:58,950 | INFO     | summary of transferred files:
[2025-05-25 16:30:17] 2025-05-25 07:29:58,950 | INFO     |  -- lfn=log.44871837._020000.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 16:30:17] 2025-05-25 07:29:58,950 | INFO     | stage-out finished correctly
[2025-05-25 16:30:17] 2025-05-25 07:30:01,283 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 16:30:17] 2025-05-25 07:30:01,918 | WARNING  | process 1816443 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 16:30:17] 2025-05-25 07:30:01,919 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6665632072/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 16:30:17] 2025-05-25 07:30:01,981 | INFO     | number of running child processes to parent process 1816443: 1
[2025-05-25 16:30:17] 2025-05-25 07:30:01,982 | INFO     | maximum number of monitored processes: 6
[2025-05-25 16:30:17] 2025-05-25 07:30:03,742 | INFO     | job 6665632072 has state=finished
[2025-05-25 16:30:17] 2025-05-25 07:30:03,742 | INFO     | preparing for final server update for job 6665632072 in state='finished'
[2025-05-25 16:30:17] 2025-05-25 07:30:03,742 | INFO     | this job has now completed (state=finished)
[2025-05-25 16:30:17] 2025-05-25 07:30:03,742 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 16:30:17] 2025-05-25 07:30:03,742 | INFO     | log transfer has been attempted: DONE
[2025-05-25 16:30:17] 2025-05-25 07:30:03,742 | INFO     | job 6665632072 has finished - writing final server update
[2025-05-25 16:30:17] 2025-05-25 07:30:03,743 | INFO     | total number of processed events: 400 (read)
[2025-05-25 16:30:17] 2025-05-25 07:30:03,744 | INFO     | executing command: lscpu
[2025-05-25 16:30:17] 2025-05-25 07:30:03,764 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 16:30:17] 2025-05-25 07:30:04,484 | INFO     | monitor loop #428: job 0:6665632072 is in state 'finished'
[2025-05-25 16:30:17] 2025-05-25 07:30:04,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 16:30:17] 2025-05-25 07:30:06,071 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 16:30:17] 2025-05-25 07:30:06,071 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6665632072/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 16:30:17] 2025-05-25 07:30:06,072 | INFO     | extracted standard info from prmon json
[2025-05-25 16:30:17] 2025-05-25 07:30:06,072 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 16:30:17] 2025-05-25 07:30:06,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 16:30:17] 2025-05-25 07:30:06,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 16:30:17] 2025-05-25 07:30:06,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 16:30:17] 2025-05-25 07:30:06,073 | INFO     | fitting pss+swap vs Time
[2025-05-25 16:30:17] 2025-05-25 07:30:06,073 | INFO     | sum of square deviations: 211285822.0
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | sum of deviations: 14861706878.999998
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | mean x: 1748155364.5
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | mean y: 2404971.8181818184
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | -- intersect: -122961702890.32886
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | intersect: -122961702890.32886
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | chi2: 1.385502887543566
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | -- intersect: -122961702890.32886
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | current memory leak: 70.34 B/s (using 88 data points, chi2=1.39)
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | ..............................
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | . Timing measurements:
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | . get job = 0 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,074 | INFO     | . initial setup = 4 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,075 | INFO     | . payload setup = 3 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,075 | INFO     | . stage-in = 0 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,075 | INFO     | . payload execution = 5791 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,075 | INFO     | . stage-out = 0 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,075 | INFO     | . log creation = 0 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,075 | INFO     | ..............................
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | 
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | job summary report
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | --------------------------------------------------
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | PanDA job id: 6665632072
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | task id: 44871837
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | errors: (none)
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | pilot state: finished 
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | transexitcode: 0
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | exeerrorcode: 0
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | exeerrordiag: 
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | exitcode: 0
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | exitmsg: OK
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | cpuconsumptiontime: 30056 s
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | nevents: 400
[2025-05-25 16:30:17] 2025-05-25 07:30:06,128 | INFO     | neventsw: 0
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | pid: 1816443
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | pgrp: 1816443
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | corecount: 6
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | event service: False
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | sizes: {0: 2393738, 3: 2393944, 11: 2393972, 5799: 2420559, 5800: 2429500, 5802: 2429556, 5807: 2429854}
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | --------------------------------------------------
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | 
[2025-05-25 16:30:17] 2025-05-25 07:30:06,129 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | job 6665632072 has completed (purged errors)
[2025-05-25 16:30:17] 2025-05-25 07:30:06,142 | INFO     | overall cleanup function is called
[2025-05-25 16:30:17] 2025-05-25 07:30:07,148 | INFO     | --- collectZombieJob: --- 10, [1816443]
[2025-05-25 16:30:17] 2025-05-25 07:30:07,149 | INFO     | zombie collector waiting for pid 1816443
[2025-05-25 16:30:17] 2025-05-25 07:30:07,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 16:30:17] 2025-05-25 07:30:07,149 | INFO     | collected zombie processes
[2025-05-25 16:30:17] 2025-05-25 07:30:07,149 | INFO     | will attempt to kill all subprocesses of pid=1816443
[2025-05-25 16:30:17] 2025-05-25 07:30:07,214 | INFO     | process IDs to be killed: [1816443] (in reverse order)
[2025-05-25 16:30:17] 2025-05-25 07:30:07,251 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 16:30:17] 2025-05-25 07:30:07,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 16:30:17] 2025-05-25 07:30:07,254 | INFO     | did not find any defunct processes belonging to 1816443
[2025-05-25 16:30:17] 2025-05-25 07:30:07,256 | INFO     | did not find any defunct processes belonging to 1816443
[2025-05-25 16:30:17] 2025-05-25 07:30:07,256 | INFO     | ready for new job
[2025-05-25 16:30:17] 2025-05-25 07:30:07,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 16:30:17] 2025-05-25 07:30:07,257 | INFO     | **************************************
[2025-05-25 16:30:17] 2025-05-25 07:30:07,257 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 16:30:17] 2025-05-25 07:30:07,257 | INFO     | **************************************
[2025-05-25 16:30:17] 2025-05-25 07:30:07,257 | INFO     | 
[2025-05-25 16:30:17] 2025-05-25 07:30:07,258 | INFO     | architecture information:
[2025-05-25 16:30:17] 2025-05-25 07:30:07,258 | INFO     | executing command: cat /etc/os-release
[2025-05-25 16:30:17] 2025-05-25 07:30:07,268 | INFO     | cat /etc/os-release:
[2025-05-25 16:30:17] NAME="CentOS Linux"
[2025-05-25 16:30:17] VERSION="7 (Core)"
[2025-05-25 16:30:17] ID="centos"
[2025-05-25 16:30:17] ID_LIKE="rhel fedora"
[2025-05-25 16:30:17] VERSION_ID="7"
[2025-05-25 16:30:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 16:30:17] ANSI_COLOR="0;31"
[2025-05-25 16:30:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 16:30:17] HOME_URL="https://www.centos.org/"
[2025-05-25 16:30:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 16:30:17] 
[2025-05-25 16:30:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 16:30:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 16:30:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 16:30:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 16:30:17] 
[2025-05-25 16:30:17] 2025-05-25 07:30:07,269 | INFO     | **************************************
[2025-05-25 16:30:17] 2025-05-25 07:30:07,771 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-25 16:30:17] 2025-05-25 07:30:07,781 | INFO     | sufficient remaining disk space (77599866880 B)
[2025-05-25 16:30:17] 2025-05-25 07:30:07,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 16:30:17] 2025-05-25 07:30:07,781 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 16:30:17] 2025-05-25 07:30:07,781 | INFO     | update_server=False
[2025-05-25 16:30:17] 2025-05-25 07:30:07,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 16:30:17] 2025-05-25 07:30:07,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:30:17] 2025-05-25 07:30:07,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 16:30:17] 2025-05-25 07:30:07,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 16:30:17] 2025-05-25 07:30:07,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 16:30:17] 2025-05-25 07:30:07,992 | INFO     | aborting loop
[2025-05-25 16:30:17] 2025-05-25 07:30:08,165 | INFO     | all job control threads have been joined
[2025-05-25 16:30:17] 2025-05-25 07:30:08,265 | INFO     | all data control threads have been joined
[2025-05-25 16:30:17] 2025-05-25 07:30:08,588 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 16:30:17] 2025-05-25 07:30:08,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 16:30:17] 2025-05-25 07:30:08,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 16:30:17] 2025-05-25 07:30:08,787 | INFO     | [job] retrieve thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:08,787 | INFO     | [job] queue monitor thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:08,809 | INFO     | all payload control threads have been joined
[2025-05-25 16:30:17] 2025-05-25 07:30:08,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:08,920 | INFO     | [data] copytool_in thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:08,997 | INFO     | [job] job monitor thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,063 | INFO     | [job] validate thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,129 | INFO     | [payload] validate_post thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,171 | INFO     | [job] control thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,271 | INFO     | [data] control thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,345 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,417 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,543 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,787 | INFO     | [data] copytool_out thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:09,815 | INFO     | [payload] control thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:10,265 | INFO     | [payload] failed_post thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:11,785 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 16:30:17] 2025-05-25 07:30:12,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140061478602560)>', '<ExcThread(monitor, started 140060762568448)>']
[2025-05-25 16:30:17] 2025-05-25 07:30:13,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 16:30:17] 2025-05-25 07:30:13,610 | INFO     | [monitor] control thread has ended
[2025-05-25 16:30:17] 2025-05-25 07:30:17,801 | INFO     | all workflow threads have been joined
[2025-05-25 16:30:17] 2025-05-25 07:30:17,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 16:30:17] 2025-05-25 07:30:17,802 | INFO     | traces error code: 0
[2025-05-25 16:30:17] 2025-05-25 07:30:17,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 16:30:17] 2025-05-25 07:30:17,876 [wrapper] ==== pilot stdout END ====
[2025-05-25 16:30:17] 2025-05-25 07:30:17,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 16:30:17] 2025-05-25 07:30:17,879 [wrapper] pilotpid: 1809880
[2025-05-25 16:30:17] 2025-05-25 07:30:17,881 [wrapper] Pilot exit status: 0
[2025-05-25 16:30:17] 2025-05-25 07:30:17,888 [wrapper] pandaids: 6665632072
[2025-05-25 16:30:17] 2025-05-25 07:30:17,913 [wrapper] cleanup supervisor_pilot 1854774 1809881
[2025-05-25 16:30:17] 2025-05-25 07:30:17,915 [wrapper] Test setup, not cleaning
[2025-05-25 16:30:17] 2025-05-25 07:30:17,917 [wrapper] apfmon messages muted
[2025-05-25 16:30:17] 2025-05-25 07:30:17,919 [wrapper] ==== wrapper stdout END ====
[2025-05-25 16:30:17] 2025-05-25 07:30:17,920 [wrapper] ==== wrapper stderr END ====
[2025-05-25 16:30:17]  *** Error codes and diagnostics ***
[2025-05-25 16:30:17]     "exeErrorCode": 0,
[2025-05-25 16:30:17]     "exeErrorDiag": "",
[2025-05-25 16:30:17]     "pilotErrorCode": 0,
[2025-05-25 16:30:17]     "pilotErrorDiag": "",
[2025-05-25 16:30:17]  *** Listing of results directory ***
[2025-05-25 16:30:17] total 414792
[2025-05-25 16:30:17] -rwx------. 1 boinc boinc     37140 May 25 01:09 runpilot2-wrapper.sh
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc      5111 May 25 01:09 queuedata.json
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc    495897 May 25 01:09 pilot3.tar.gz
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc       100 May 25 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 16:30:17] -rwxr-xr-x. 1 boinc boinc      7986 May 25 14:52 run_atlas
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc       105 May 25 14:52 job.xml
[2025-05-25 16:30:17] -rw-r--r--. 2 boinc boinc     15093 May 25 14:52 start_atlas.sh
[2025-05-25 16:30:17] drwxrwx--x. 2 boinc boinc        68 May 25 14:52 shared
[2025-05-25 16:30:17] -rw-r--r--. 2 boinc boinc    508866 May 25 14:52 input.tar.gz
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc      9464 May 25 14:52 init_data.xml
[2025-05-25 16:30:17] -rw-r--r--. 2 boinc boinc 223696691 May 25 14:52 EVNT.44871834._000798.pool.root.1
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc         0 May 25 14:52 boinc_lockfile
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc      2557 May 25 14:52 pandaJob.out
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc    990811 May 25 14:53 agis_schedconf.cvmfs.json
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc   1596740 May 25 14:53 agis_ddmendpoints.agis.ALL.json
[2025-05-25 16:30:17] drwx------. 4 boinc boinc      4096 May 25 14:53 pilot3
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc 195564246 May 25 16:29 HITS.44871837._020000.pool.root.1
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc        95 May 25 16:29 pilot_heartbeat.json
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc      1019 May 25 16:29 memory_monitor_summary.json
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc    273806 May 25 16:29 log.44871837._020000.job.log.tgz.1
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc      8192 May 25 16:30 boinc_mmap_file
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc        27 May 25 16:30 wrapper_checkpoint.txt
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc       529 May 25 16:30 boinc_task_state.xml
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc      7662 May 25 16:30 heartbeat.json
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc      4353 May 25 16:30 pilotlog.txt
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc    557980 May 25 16:30 log.44871837._020000.job.log.1
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc       357 May 25 16:30 output.list
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc       620 May 25 16:30 runtime_log
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc    849920 May 25 16:30 result.tar.gz
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc      8617 May 25 16:30 runtime_log.err
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc       641 May 25 16:30 NtjLDmxb6c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhzMKDmlQFbAn.diag
[2025-05-25 16:30:17] -rw-r--r--. 1 boinc boinc     20915 May 25 16:30 stderr.txt
[2025-05-25 16:30:17] HITS file was successfully produced:
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc 195564246 May 25 16:29 shared/HITS.pool.root.1
[2025-05-25 16:30:17]  *** Contents of shared directory: ***
[2025-05-25 16:30:17] total 410788
[2025-05-25 16:30:17] -rw-r--r--. 2 boinc boinc     15093 May 25 14:52 start_atlas.sh
[2025-05-25 16:30:17] -rw-r--r--. 2 boinc boinc    508866 May 25 14:52 input.tar.gz
[2025-05-25 16:30:17] -rw-r--r--. 2 boinc boinc 223696691 May 25 14:52 ATLAS.root_0
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc 195564246 May 25 16:29 HITS.pool.root.1
[2025-05-25 16:30:17] -rw-------. 1 boinc boinc    849920 May 25 16:30 result.tar.gz
16:30:19 (1806171): run_atlas exited; CPU time 30105.168543
16:30:19 (1806171): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN