Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:34 (13773): wrapper (7.7.26015): starting
07:38:34 (13773): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 07:38:34] Arguments: --nthreads 8
[2025-05-25 07:38:34] Threads: 8
[2025-05-25 07:38:34] Checking for CVMFS
[2025-05-25 07:38:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 07:38:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 07:38:35] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 07:38:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 07:38:36] 2.11.2.0 26253 18395 95752 146391 2 59 19117014 25165824 3085 130560 0 10694532 99.737 12627442 1912 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 07:38:36] CVMFS is ok
[2025-05-25 07:38:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 07:38:36] Checking for apptainer binary...
[2025-05-25 07:38:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 07:38:36] Running /usr/bin/apptainer --version
[2025-05-25 07:38:36] apptainer version 1.3.2-1.el7
[2025-05-25 07:38:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 07:38:44] cg-vwn377.simple-grid.lan
[2025-05-25 07:38:44] apptainer works
[2025-05-25 07:38:44] Set ATHENA_PROC_NUMBER=8
[2025-05-25 07:38:44] Set ATHENA_CORE_NUMBER=8
[2025-05-25 07:38:44] Starting ATLAS job with PandaID=6665677379
[2025-05-25 07:38:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 13:16:59]  *** The last 200 lines of the pilot log: ***
[2025-05-25 13:16:59] 2025-05-25 11:02:20,739 | INFO     | monitor loop #1389: job 0:6665677379 is in state 'finished'
[2025-05-25 13:16:59] 2025-05-25 11:02:20,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,718 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 13:16:59] 2025-05-25 11:02:21,718 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6665677379/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,719 | INFO     | extracted standard info from prmon json
[2025-05-25 13:16:59] 2025-05-25 11:02:21,719 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 13:16:59] 2025-05-25 11:02:21,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 13:16:59] 2025-05-25 11:02:21,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 13:16:59] 2025-05-25 11:02:21,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 13:16:59] 2025-05-25 11:02:21,731 | INFO     | fitting pss+swap vs Time
[2025-05-25 13:16:59] 2025-05-25 11:02:21,731 | INFO     | sum of square deviations: 8884603792.5
[2025-05-25 13:16:59] 2025-05-25 11:02:21,735 | INFO     | sum of deviations: 61983516816.49997
[2025-05-25 13:16:59] 2025-05-25 11:02:21,735 | INFO     | mean x: 1748161491.5
[2025-05-25 13:16:59] 2025-05-25 11:02:21,735 | INFO     | mean y: 2474162.408496732
[2025-05-25 13:16:59] 2025-05-25 11:02:21,735 | INFO     | -- intersect: -12193589920.698776
[2025-05-25 13:16:59] 2025-05-25 11:02:21,735 | INFO     | intersect: -12193589920.698776
[2025-05-25 13:16:59] 2025-05-25 11:02:21,736 | INFO     | chi2: 4.946275272726374
[2025-05-25 13:16:59] 2025-05-25 11:02:21,737 | INFO     | sum of square deviations: 8456158550.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,757 | INFO     | sum of deviations: 81205499578.00002
[2025-05-25 13:16:59] 2025-05-25 11:02:21,758 | INFO     | mean x: 1748161339.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,758 | INFO     | mean y: 2480908.438538206
[2025-05-25 13:16:59] 2025-05-25 11:02:21,758 | INFO     | -- intersect: -16785321027.51741
[2025-05-25 13:16:59] 2025-05-25 11:02:21,758 | INFO     | intersect: -16785321027.51741
[2025-05-25 13:16:59] 2025-05-25 11:02:21,758 | INFO     | chi2: 4.201772790976803
[2025-05-25 13:16:59] 2025-05-25 11:02:21,759 | INFO     | current chi2=4.201772790976803 (change=15.051780192152606 %)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,759 | INFO     | right removable region: 300
[2025-05-25 13:16:59] 2025-05-25 11:02:21,759 | INFO     | sum of square deviations: 8456158550.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,763 | INFO     | sum of deviations: -35625450702.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,763 | INFO     | mean x: 1748161644.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,763 | INFO     | mean y: 2508842.495016611
[2025-05-25 13:16:59] 2025-05-25 11:02:21,763 | INFO     | -- intersect: 7367442470.35956
[2025-05-25 13:16:59] 2025-05-25 11:02:21,763 | INFO     | intersect: 7367442470.35956
[2025-05-25 13:16:59] 2025-05-25 11:02:21,764 | INFO     | chi2: 1.012367210883717
[2025-05-25 13:16:59] 2025-05-25 11:02:21,764 | INFO     | current chi2=1.012367210883717 (change=79.53273614863528 %)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,764 | INFO     | sum of square deviations: 8041713570.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,767 | INFO     | sum of deviations: -43776734729.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,768 | INFO     | mean x: 1748161796.5
[2025-05-25 13:16:59] 2025-05-25 11:02:21,768 | INFO     | mean y: 2511804.8175675673
[2025-05-25 13:16:59] 2025-05-25 11:02:21,768 | INFO     | -- intersect: 9518992908.328518
[2025-05-25 13:16:59] 2025-05-25 11:02:21,768 | INFO     | intersect: 9518992908.328518
[2025-05-25 13:16:59] 2025-05-25 11:02:21,768 | INFO     | chi2: 0.9332297093311229
[2025-05-25 13:16:59] 2025-05-25 11:02:21,768 | INFO     | current chi2=0.9332297093311229 (change=7.817074743413826 %)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,769 | INFO     | left removable region: 20
[2025-05-25 13:16:59] 2025-05-25 11:02:21,769 | INFO     | sum of square deviations: 6806862510.0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,772 | INFO     | sum of deviations: -4141129173.499998
[2025-05-25 13:16:59] 2025-05-25 11:02:21,772 | INFO     | mean x: 1748161918.5
[2025-05-25 13:16:59] 2025-05-25 11:02:21,772 | INFO     | mean y: 2511660.975
[2025-05-25 13:16:59] 2025-05-25 11:02:21,772 | INFO     | -- intersect: 1066050745.2545319
[2025-05-25 13:16:59] 2025-05-25 11:02:21,772 | INFO     | intersect: 1066050745.2545319
[2025-05-25 13:16:59] 2025-05-25 11:02:21,773 | INFO     | chi2: 0.08204191664048716
[2025-05-25 13:16:59] 2025-05-25 11:02:21,773 | INFO     | -- intersect: 1066050745.2545319
[2025-05-25 13:16:59] 2025-05-25 11:02:21,773 | INFO     | current memory leak: -0.61 B/s (using 280 data points, chi2=0.08)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | ..............................
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . Timing measurements:
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . get job = 0 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . initial setup = 9 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . payload setup = 166 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . stage-in = 0 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . payload execution = 18797 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . stage-out = 3 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | . log creation = 1 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,774 | INFO     | ..............................
[2025-05-25 13:16:59] 2025-05-25 11:02:21,920 | INFO     | 
[2025-05-25 13:16:59] 2025-05-25 11:02:21,920 | INFO     | job summary report
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | --------------------------------------------------
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | PanDA job id: 6665677379
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | task id: 44871837
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | errors: (none)
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | pilot state: finished 
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | transexitcode: 0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | exeerrorcode: 0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,921 | INFO     | exeerrordiag: 
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | exitcode: 0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | exitmsg: OK
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | cpuconsumptiontime: 71540 s
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | nevents: 400
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | neventsw: 0
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | pid: 28004
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | pgrp: 28004
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | corecount: 8
[2025-05-25 13:16:59] 2025-05-25 11:02:21,922 | INFO     | event service: False
[2025-05-25 13:16:59] 2025-05-25 11:02:21,923 | INFO     | sizes: {0: 2392911, 1: 2393767, 2: 2393767, 12: 2393795, 23: 2393823, 34: 2393851, 45: 2394007, 55: 2394035, 66: 2394063, 77: 2394353, 18968: 2426032, 18969: 24263
[2025-05-25 13:16:59] 2025-05-25 11:02:21,923 | INFO     | --------------------------------------------------
[2025-05-25 13:16:59] 2025-05-25 11:02:21,923 | INFO     | 
[2025-05-25 13:16:59] 2025-05-25 11:02:21,923 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-25 13:16:59] 2025-05-25 11:02:22,481 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,483 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 13:16:59] 2025-05-25 11:02:22,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,483 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 13:16:59] 2025-05-25 11:02:22,483 | INFO     | job 6665677379 has completed (purged errors)
[2025-05-25 13:16:59] 2025-05-25 11:02:22,484 | INFO     | overall cleanup function is called
[2025-05-25 13:16:59] 2025-05-25 11:02:22,650 | INFO     | PID=19097 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-25 13:16:59] 2025-05-25 11:02:22,650 | INFO     | .. there are 9 such processes running
[2025-05-25 13:16:59] 2025-05-25 11:02:23,496 | INFO     | --- collectZombieJob: --- 10, [28004]
[2025-05-25 13:16:59] 2025-05-25 11:02:23,496 | INFO     | zombie collector waiting for pid 28004
[2025-05-25 13:16:59] 2025-05-25 11:02:23,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 13:16:59] 2025-05-25 11:02:23,496 | INFO     | collected zombie processes
[2025-05-25 13:16:59] 2025-05-25 11:02:23,496 | INFO     | will attempt to kill all subprocesses of pid=28004
[2025-05-25 13:16:59] 2025-05-25 11:02:23,633 | INFO     | process IDs to be killed: [28004] (in reverse order)
[2025-05-25 13:16:59] 2025-05-25 11:02:24,517 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 13:16:59] 2025-05-25 11:02:24,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 13:16:59] 2025-05-25 11:02:24,520 | INFO     | did not find any defunct processes belonging to 28004
[2025-05-25 13:16:59] 2025-05-25 11:02:24,523 | INFO     | did not find any defunct processes belonging to 28004
[2025-05-25 13:16:59] 2025-05-25 11:02:24,523 | INFO     | ready for new job
[2025-05-25 13:16:59] 2025-05-25 11:02:24,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 13:16:59] 2025-05-25 11:02:24,525 | INFO     | **************************************
[2025-05-25 13:16:59] 2025-05-25 11:02:24,526 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 13:16:59] 2025-05-25 11:02:24,526 | INFO     | **************************************
[2025-05-25 13:16:59] 2025-05-25 11:02:24,526 | INFO     | 
[2025-05-25 13:16:59] 2025-05-25 11:02:24,526 | INFO     | pilot is running in a VM
[2025-05-25 13:16:59] 2025-05-25 11:02:24,527 | INFO     | architecture information:
[2025-05-25 13:16:59] 2025-05-25 11:02:24,537 | INFO     | executing command: cat /etc/os-release
[2025-05-25 13:16:59] 2025-05-25 11:02:24,792 | INFO     | cat /etc/os-release:
[2025-05-25 13:16:59] NAME="CentOS Linux"
[2025-05-25 13:16:59] VERSION="7 (Core)"
[2025-05-25 13:16:59] ID="centos"
[2025-05-25 13:16:59] ID_LIKE="rhel fedora"
[2025-05-25 13:16:59] VERSION_ID="7"
[2025-05-25 13:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 13:16:59] ANSI_COLOR="0;31"
[2025-05-25 13:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 13:16:59] HOME_URL="https://www.centos.org/"
[2025-05-25 13:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 13:16:59] 
[2025-05-25 13:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 13:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 13:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 13:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 13:16:59] 
[2025-05-25 13:16:59] 2025-05-25 11:02:24,793 | INFO     | **************************************
[2025-05-25 13:16:59] 2025-05-25 11:02:25,296 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-25 13:16:59] 2025-05-25 11:02:25,543 | INFO     | sufficient remaining disk space (493335085056 B)
[2025-05-25 13:16:59] 2025-05-25 11:02:25,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 13:16:59] 2025-05-25 11:02:25,543 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 13:16:59] 2025-05-25 11:02:25,543 | INFO     | update_server=False
[2025-05-25 13:16:59] 2025-05-25 11:02:25,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 13:16:59] 2025-05-25 11:02:25,544 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 13:16:59] 2025-05-25 11:02:25,544 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 13:16:59] 2025-05-25 11:02:25,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 13:16:59] 2025-05-25 11:02:25,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 13:16:59] 2025-05-25 11:02:25,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 13:16:59] 2025-05-25 11:02:25,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 13:16:59] 2025-05-25 11:02:25,764 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 13:16:59] 2025-05-25 11:02:25,764 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 13:16:59] 2025-05-25 11:02:25,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:16:59] 2025-05-25 11:02:25,764 | INFO     | will abort loop
[2025-05-25 13:16:59] 2025-05-25 11:02:25,953 | INFO     | all data control threads have been joined
[2025-05-25 13:16:59] 2025-05-25 11:02:26,245 | INFO     | all job control threads have been joined
[2025-05-25 13:16:59] 2025-05-25 11:02:26,544 | INFO     | all payload control threads have been joined
[2025-05-25 13:16:59] 2025-05-25 11:02:26,549 | INFO     | [job] retrieve thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:26,770 | INFO     | [job] job monitor thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:26,822 | INFO     | [job] validate thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:26,866 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:26,895 | INFO     | [payload] failed_post thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:26,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:16:59] 2025-05-25 11:02:26,959 | INFO     | [data] control thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,172 | INFO     | [data] copytool_in thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,250 | INFO     | [job] control thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,401 | INFO     | [payload] validate_post thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,555 | INFO     | [payload] control thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,653 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,659 | INFO     | [data] copytool_out thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,941 | INFO     | [job] queue monitor thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:27,962 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:29,640 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 13:16:59] 2025-05-25 11:02:31,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300421093184)>', '<ExcThread(monitor, started 140299972097792)>']
[2025-05-25 13:16:59] 2025-05-25 11:02:32,585 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 13:16:59] 2025-05-25 11:02:32,585 | INFO     | [monitor] control thread has ended
[2025-05-25 13:16:59] 2025-05-25 11:02:36,747 | INFO     | all workflow threads have been joined
[2025-05-25 13:16:59] 2025-05-25 11:02:36,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 13:16:59] 2025-05-25 11:02:36,747 | INFO     | traces error code: 0
[2025-05-25 13:16:59] 2025-05-25 11:02:36,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 13:16:59] 2025-05-25 11:02:37,020 [wrapper] ==== pilot stdout END ====
[2025-05-25 13:16:59] 2025-05-25 11:02:37,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 13:16:59] 2025-05-25 11:02:37,138 [wrapper] pilotpid: 19097
[2025-05-25 13:16:59] 2025-05-25 11:02:37,185 [wrapper] Pilot exit status: 0
[2025-05-25 13:16:59] 2025-05-25 11:02:37,575 [wrapper] pandaids: 6665677379
[2025-05-25 13:16:59] 2025-05-25 11:02:38,286 [wrapper] cleanup supervisor_pilot 18109 19098
[2025-05-25 13:16:59] 2025-05-25 11:02:38,383 [wrapper] Test setup, not cleaning
[2025-05-25 13:16:59] 2025-05-25 11:02:38,423 [wrapper] apfmon messages muted
[2025-05-25 13:16:59] 2025-05-25 11:02:38,543 [wrapper] ==== wrapper stdout END ====
[2025-05-25 13:16:59] 2025-05-25 11:02:38,644 [wrapper] ==== wrapper stderr END ====
[2025-05-25 13:16:59]  *** Error codes and diagnostics ***
[2025-05-25 13:16:59]     "exeErrorCode": 0,
[2025-05-25 13:16:59]     "exeErrorDiag": "",
[2025-05-25 13:16:59]     "pilotErrorCode": 0,
[2025-05-25 13:16:59]     "pilotErrorDiag": "",
[2025-05-25 13:16:59]  *** Listing of results directory ***
[2025-05-25 13:16:59] total 419696
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc    495897 May 24 20:37 pilot3.tar.gz
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc      5111 May 24 20:44 queuedata.json
[2025-05-25 13:16:59] -rwx------. 1 boinc boinc     37140 May 24 20:45 runpilot2-wrapper.sh
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc       100 May 25 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 13:16:59] -rwxr-xr-x. 1 boinc boinc      7986 May 25 07:38 run_atlas
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc       105 May 25 07:38 job.xml
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc      6371 May 25 07:38 init_data.xml
[2025-05-25 13:16:59] -rw-r--r--. 2 boinc boinc 222968416 May 25 07:38 EVNT.44871834._000882.pool.root.1
[2025-05-25 13:16:59] -rw-r--r--. 2 boinc boinc     15093 May 25 07:38 start_atlas.sh
[2025-05-25 13:16:59] drwxrwx--x. 2 boinc boinc        68 May 25 07:38 shared
[2025-05-25 13:16:59] -rw-r--r--. 2 boinc boinc    508873 May 25 07:38 input.tar.gz
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc         0 May 25 07:38 boinc_lockfile
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc      2558 May 25 07:38 pandaJob.out
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc    990811 May 25 07:41 agis_schedconf.cvmfs.json
[2025-05-25 13:16:59] drwx------. 4 boinc boinc      4096 May 25 07:41 pilot3
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc 198878332 May 25 12:59 HITS.44871837._022131.pool.root.1
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc       531 May 25 12:59 boinc_task_state.xml
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc      1018 May 25 13:00 memory_monitor_summary.json
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc   1596740 May 25 13:00 agis_ddmendpoints.agis.ALL.json
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc    425421 May 25 13:00 log.44871837._022131.job.log.tgz.1
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc        95 May 25 13:01 pilot_heartbeat.json
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc      7690 May 25 13:02 heartbeat.json
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc      4725 May 25 13:02 pilotlog.txt
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc   1628994 May 25 13:02 log.44871837._022131.job.log.1
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc       357 May 25 13:02 output.list
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc       620 May 25 13:02 runtime_log
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc   2068480 May 25 13:02 result.tar.gz
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc       656 May 25 13:02 t2CLDmV38c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoHSKDmlnbPNn.diag
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc      8659 May 25 13:02 runtime_log.err
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc      8192 May 25 13:16 boinc_mmap_file
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc        28 May 25 13:16 wrapper_checkpoint.txt
[2025-05-25 13:16:59] -rw-r--r--. 1 boinc boinc     20820 May 25 13:16 stderr.txt
[2025-05-25 13:16:59] HITS file was successfully produced:
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc 198878332 May 25 12:59 shared/HITS.pool.root.1
[2025-05-25 13:16:59]  *** Contents of shared directory: ***
[2025-05-25 13:16:59] total 414500
[2025-05-25 13:16:59] -rw-r--r--. 2 boinc boinc 222968416 May 25 07:38 ATLAS.root_0
[2025-05-25 13:16:59] -rw-r--r--. 2 boinc boinc     15093 May 25 07:38 start_atlas.sh
[2025-05-25 13:16:59] -rw-r--r--. 2 boinc boinc    508873 May 25 07:38 input.tar.gz
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc 198878332 May 25 12:59 HITS.pool.root.1
[2025-05-25 13:16:59] -rw-------. 1 boinc boinc   2068480 May 25 13:02 result.tar.gz
13:17:01 (13773): run_atlas exited; CPU time 71799.426354
13:17:01 (13773): called boinc_finish(0)

</stderr_txt>
]]>

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