Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 19:49:37 (26428): Detected: vboxwrapper 26206
2025-05-24 19:49:37 (26428): Detected: BOINC client v8.0.2
2025-05-24 19:49:39 (26428): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-05-24 19:49:39 (26428): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 19:49:39 (26428): Create VM. (boinc_52356238bb8b9062, slot#1)
2025-05-24 19:49:40 (26428): Setting Memory Size for VM. (4400MB)
2025-05-24 19:49:40 (26428): Setting CPU Count for VM. (4)
2025-05-24 19:49:40 (26428): Setting Chipset Options for VM.
2025-05-24 19:49:41 (26428): Setting Graphics Controller Options for VM.
2025-05-24 19:49:41 (26428): Setting Boot Options for VM.
2025-05-24 19:49:41 (26428): Setting Network Configuration for NAT.
2025-05-24 19:49:41 (26428): Enabling VM Network Access.
2025-05-24 19:49:42 (26428): Disabling USB Support for VM.
2025-05-24 19:49:42 (26428): Disabling COM Port Support for VM.
2025-05-24 19:49:42 (26428): Disabling LPT Port Support for VM.
2025-05-24 19:49:43 (26428): Disabling Audio Support for VM.
2025-05-24 19:49:43 (26428): Disabling Clipboard Support for VM.
2025-05-24 19:49:43 (26428): Disabling Drag and Drop Support for VM.
2025-05-24 19:49:43 (26428): Adding storage controller(s) to VM.
2025-05-24 19:49:44 (26428): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 19:49:46 (26428): Adding VirtualBox Guest Additions to VM.
2025-05-24 19:49:47 (26428): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 19:49:47 (26428): forwarding host port 57337 to guest port 80
2025-05-24 19:49:47 (26428): Enabling remote desktop for VM.
2025-05-24 19:49:48 (26428): Required extension pack not installed, remote desktop not enabled.
2025-05-24 19:49:48 (26428): Enabling shared directory for VM.
2025-05-24 19:49:48 (26428): Starting VM using VBoxManage interface. (boinc_52356238bb8b9062, slot#1)
2025-05-24 19:49:54 (26428): Successfully started VM. (PID = '25672')
2025-05-24 19:49:54 (26428): Reporting VM Process ID to BOINC.
2025-05-24 19:49:54 (26428): Guest Log: BIOS: VirtualBox 7.1.4
2025-05-24 19:49:54 (26428): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 19:49:54 (26428): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 19:49:54 (26428): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 19:49:54 (26428): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 19:49:54 (26428): Detected: Web Application Enabled (http://localhost:57337)
2025-05-24 19:49:54 (26428): Preference change detected
2025-05-24 19:49:54 (26428): Setting CPU throttle for VM. (90%)
2025-05-24 19:49:54 (26428): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 19:49:56 (26428): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 19:49:56 (26428): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 19:49:59 (26428): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 19:49:59 (26428): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 19:49:59 (26428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 19:50:04 (26428): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 19:50:04 (26428): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 19:50:08 (26428): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000089 main     Log opened 2025-05-24T19:50:06.189210000Z
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000157 main     OS Product: Linux
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000181 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000207 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000228 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000228 main     Process ID: 1307
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.000228 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 19:50:08 (26428): Guest Log: 00:00:00.001425 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 19:50:08 (26428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 19:50:08 (26428): Guest Log: [INFO] Mounting shared directory
2025-05-24 19:50:08 (26428): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 19:50:12 (26428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 19:50:12 (26428): Guest Log: [INFO] Detected branch: prod
2025-05-24 19:50:12 (26428): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 19:50:12 (26428): Guest Log: Copying input files
2025-05-24 19:50:13 (26428): Guest Log: Copied input files into RunAtlas.
2025-05-24 19:50:13 (26428): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 19:50:13 (26428): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 19:50:13 (26428): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 19:50:13 (26428): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 19:50:18 (26428): Guest Log: 00:00:10.046253 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 679 233 000ns (GuestNow=1 748 130 617 870 792 000 ns GuestLast=1 748 116 206 191 559 000 ns fSetTimeLastLoop=true )
2025-05-24 19:50:25 (26428): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 19:50:26 (26428): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 19:50:26 (26428): Guest Log: 2.6.3.0 1587 0 30172 146383 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 19:50:26 (26428): Guest Log: copied the webapp to /var/www
2025-05-24 19:50:26 (26428): Guest Log: ATHENA_PROC_NUMBER=4
2025-05-24 19:50:26 (26428): Guest Log: ATHENA_CORE_NUMBER=4
2025-05-24 19:50:26 (26428): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 19:50:27 (26428): Guest Log:  *** Starting ATLAS job. (PandaID=6665676067 taskID=44871837) ***
2025-05-24 19:50:49 (26428): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 19:51:10 (26428): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 19:51:59 (26428): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 19:52:20 (26428): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 20:32:12 (26428): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 20:32:32 (26428): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 20:32:52 (26428): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 20:33:12 (26428): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 21:31:24 (26428): Status Report: Elapsed Time: '6000.000000'
2025-05-24 21:31:24 (26428): Status Report: CPU Time: '20481.609375'
2025-05-24 21:33:05 (26428): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 21:33:25 (26428): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 21:44:46 (26428): Guest Log:  *** Job finished ***
2025-05-24 21:44:46 (26428): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:42:52,807 | INFO     | [data] queue_monitor thread has finished
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:42:59,566 | INFO     | job.realtimelogging is not enabled
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:00,590 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:01,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908305561408)>', '<ExcThread(monitor, started 139907838220032)>']
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:02,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:02,827 | INFO     | [monitor] control thread has ended
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,849 | INFO     | all workflow threads have been joined
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,849 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,850 | INFO     | traces error code: 0
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,904 [wrapper] ==== pilot stdout END ====
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,907 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,910 [wrapper] pilotpid: 5881
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:06,912 [wrapper] Pilot exit status: 0
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:07,064 [wrapper] pandaids: 6665676067
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:07,128 [wrapper] cleanup supervisor_pilot  4628 5882
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:07,131 [wrapper] Test setup, not cleaning
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:07,133 [wrapper] apfmon messages muted
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:07,136 [wrapper] ==== wrapper stdout END ====
2025-05-24 21:44:46 (26428): Guest Log: 2025-05-25 01:43:07,139 [wrapper] ==== wrapper stderr END ====
2025-05-24 21:44:46 (26428): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 21:44:46 (26428): Guest Log:     "exeErrorCode": 0,
2025-05-24 21:44:46 (26428): Guest Log:     "exeErrorDiag": "",
2025-05-24 21:44:46 (26428): Guest Log:     "pilotErrorCode": 0,
2025-05-24 21:44:46 (26428): Guest Log:     "pilotErrorDiag": "",
2025-05-24 21:44:46 (26428): Guest Log:  *** Listing of results directory ***
2025-05-24 21:44:46 (26428): Guest Log: total 192640
2025-05-24 21:44:46 (26428): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 17:49 pilot3.tar.gz
2025-05-24 21:44:46 (26428): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 17:59 runpilot2-wrapper.sh
2025-05-24 21:44:46 (26428): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 17:59 queuedata.json
2025-05-24 21:44:46 (26428): Guest Log: -rwxr-xr-x. 1 atlas atlas     12241 May 24 23:50 init_data.xml
2025-05-24 21:44:46 (26428): Guest Log: -rwxr-xr-x. 1 atlas atlas    508874 May 24 23:50 input.tar.gz
2025-05-24 21:44:46 (26428): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 24 23:50 start_atlas.sh
2025-05-24 21:44:46 (26428): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 23:50 EVNT.44871834._000859.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 21:44:46 (26428): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 24 23:50 pandaJob.out
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas    990811 May 24 23:51 agis_schedconf.cvmfs.json
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 23:51 agis_ddmendpoints.agis.ALL.json
2025-05-24 21:44:46 (26428): Guest Log: drwx------. 4 atlas atlas      4096 May 24 23:51 pilot3
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas        95 May 25 01:42 pilot_heartbeat.json
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas 191822471 May 25 01:42 HITS.44871837._021561.pool.root.1
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas      1042 May 25 01:42 memory_monitor_summary.json
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas    261358 May 25 01:42 log.44871837._021561.job.log.tgz.1
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas      7673 May 25 01:42 heartbeat.json
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas      4608 May 25 01:43 pilotlog.txt
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas    579797 May 25 01:43 log.44871837._021561.job.log.1
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas       357 May 25 01:43 output.list
2025-05-24 21:44:46 (26428): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 01:43 runtime_log
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas    860160 May 25 01:43 result.tar.gz
2025-05-24 21:44:46 (26428): Guest Log: -rw-r--r--. 1 atlas atlas      8591 May 25 01:43 runtime_log.err
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas       656 May 25 01:43 6HcNDmkK8c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg7MKDmXwqkMn.diag
2025-05-24 21:44:46 (26428): Guest Log: Looking for outputfile HITS.44871837._021561.pool.root.1
2025-05-24 21:44:46 (26428): Guest Log: HITS file was successfully produced
2025-05-24 21:44:46 (26428): Guest Log: -rw-------. 1 atlas atlas 191822471 May 25 01:42 /home/atlas/RunAtlas/HITS.44871837._021561.pool.root.1
2025-05-24 21:44:47 (26428): Guest Log: Successfully finished the ATLAS job!
2025-05-24 21:44:47 (26428): Guest Log: Copying the results back to the shared directory!
2025-05-24 21:44:47 (26428): Guest Log:  *** Contents of shared directory: ***
2025-05-24 21:44:47 (26428): Guest Log: total 409136
2025-05-24 21:44:47 (26428): Guest Log: -rwxrwxrwx. 1 root root 225729822 May 24 23:49 ATLAS.root_0
2025-05-24 21:44:47 (26428): Guest Log: -rwxrwxrwx. 1 root root 191822471 May 25  2025 HITS.pool.root.1
2025-05-24 21:44:47 (26428): Guest Log: -rwxrwxrwx. 1 root root     12241 May 24 23:49 init_data.xml
2025-05-24 21:44:47 (26428): Guest Log: -rwxrwxrwx. 1 root root    508874 May 24 23:38 input.tar.gz
2025-05-24 21:44:47 (26428): Guest Log: -rwxrwxrwx. 1 root root    860160 May 25  2025 result.tar.gz
2025-05-24 21:44:47 (26428): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 23:38 start_atlas.sh
2025-05-24 21:44:47 (26428): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 21:44:47 (26428): VM Completion File Detected.
2025-05-24 21:44:47 (26428): Powering off VM.
2025-05-24 21:44:47 (26428): Successfully stopped VM.
2025-05-24 21:44:47 (26428): Deregistering VM. (boinc_52356238bb8b9062, slot#1)
2025-05-24 21:44:47 (26428): Removing network bandwidth throttle group from VM.
2025-05-24 21:44:48 (26428): Removing VM from VirtualBox.
21:44:53 (26428): called boinc_finish(0)

</stderr_txt>
]]>

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