Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-25 03:12:22 (15124): Detected: vboxwrapper 26206
2025-05-25 03:12:22 (15124): Detected: BOINC client v8.0.2
2025-05-25 03:12:22 (15124): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-25 03:12:22 (15124): Successfully copied 'init_data.xml' to the shared directory.
2025-05-25 03:12:23 (15124): Create VM. (boinc_1c92a1a6d632cf07, slot#2)
2025-05-25 03:12:23 (15124): Setting Memory Size for VM. (4300MB)
2025-05-25 03:12:24 (15124): Setting CPU Count for VM. (3)
2025-05-25 03:12:24 (15124): Setting Chipset Options for VM.
2025-05-25 03:12:24 (15124): Setting Graphics Controller Options for VM.
2025-05-25 03:12:24 (15124): Setting Boot Options for VM.
2025-05-25 03:12:25 (15124): Setting Network Configuration for NAT.
2025-05-25 03:12:25 (15124): Enabling VM Network Access.
2025-05-25 03:12:25 (15124): Disabling USB Support for VM.
2025-05-25 03:12:26 (15124): Disabling COM Port Support for VM.
2025-05-25 03:12:26 (15124): Disabling LPT Port Support for VM.
2025-05-25 03:12:26 (15124): Disabling Audio Support for VM.
2025-05-25 03:12:26 (15124): Disabling Clipboard Support for VM.
2025-05-25 03:12:27 (15124): Disabling Drag and Drop Support for VM.
2025-05-25 03:12:27 (15124): Adding storage controller(s) to VM.
2025-05-25 03:12:27 (15124): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-25 03:12:30 (15124): Adding VirtualBox Guest Additions to VM.
2025-05-25 03:12:30 (15124): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-25 03:12:30 (15124): forwarding host port 65272 to guest port 80
2025-05-25 03:12:31 (15124): Enabling remote desktop for VM.
2025-05-25 03:12:31 (15124): Required extension pack not installed, remote desktop not enabled.
2025-05-25 03:12:31 (15124): Enabling shared directory for VM.
2025-05-25 03:12:31 (15124): Starting VM using VBoxManage interface. (boinc_1c92a1a6d632cf07, slot#2)
2025-05-25 03:12:40 (15124): Successfully started VM. (PID = '17024')
2025-05-25 03:12:40 (15124): Reporting VM Process ID to BOINC.
2025-05-25 03:12:40 (15124): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-25 03:12:40 (15124): Guest Log: CPUID EDX: 0x178bfbff
2025-05-25 03:12:40 (15124): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-25 03:12:40 (15124): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-25 03:12:40 (15124): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-25 03:12:40 (15124): Detected: Web Application Enabled (http://localhost:65272)
2025-05-25 03:12:40 (15124): Preference change detected
2025-05-25 03:12:40 (15124): Setting CPU throttle for VM. (50%)
2025-05-25 03:12:40 (15124): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-25 03:12:42 (15124): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-25 03:12:42 (15124): Guest Log: BIOS: Booting from Hard Disk...
2025-05-25 03:12:46 (15124): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-25 03:12:46 (15124): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-25 03:12:46 (15124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-25 03:12:55 (15124): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-25 03:12:55 (15124): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-25 03:13:07 (15124): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000198 main     Log opened 2025-05-25T03:13:05.212387000Z
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000409 main     OS Product: Linux
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000460 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000503 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000548 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000549 main     Process ID: 1262
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.000549 main     Package type: LINUX_64BITS_GENERIC
2025-05-25 03:13:07 (15124): Guest Log: 00:00:00.001685 main     5.2.32 r132073 started. Verbose level = 0
2025-05-25 03:13:07 (15124): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-25 03:13:07 (15124): Guest Log: [INFO] Mounting shared directory
2025-05-25 03:13:07 (15124): Guest Log: [INFO] Checking for init_data.xml
2025-05-25 03:13:12 (15124): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-25 03:13:12 (15124): Guest Log: [INFO] Detected branch: prod
2025-05-25 03:13:12 (15124): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-25 03:13:12 (15124): Guest Log: Copying input files
2025-05-25 03:13:15 (15124): Guest Log: Copied input files into RunAtlas.
2025-05-25 03:13:16 (15124): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-25 03:13:16 (15124): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-25 03:13:16 (15124): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-25 03:13:16 (15124): Guest Log: Further information can be found at the LHC@home message board.
2025-05-25 03:13:17 (15124): Guest Log: 00:00:10.014333 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 350 998 000ns (GuestNow=1 748 135 596 866 226 000 ns GuestLast=1 748 142 785 217 224 000 ns fSetTimeLastLoop=true )
2025-05-25 03:13:26 (15124): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-25 03:13:27 (15124): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-25 03:13:27 (15124): Guest Log: 2.6.3.0 1538 0 30072 146384 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-05-25 03:13:28 (15124): Guest Log: copied the webapp to /var/www
2025-05-25 03:13:28 (15124): Guest Log: ATHENA_PROC_NUMBER=3
2025-05-25 03:13:28 (15124): Guest Log: ATHENA_CORE_NUMBER=3
2025-05-25 03:13:29 (15124): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-25 03:13:29 (15124): Guest Log:  *** Starting ATLAS job. (PandaID=6665675531 taskID=44871837) ***
2025-05-25 03:29:24 (15124): Guest Log:  *** Job finished ***
2025-05-25 03:29:24 (15124): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:13,909 | INFO     | [payload] validate_pre thread has finished
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:14,090 | INFO     | [payload] validate_post thread has finished
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:15,515 | INFO     | [data] queue_monitor thread has finished
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:16,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652080334656)>', '<ExcThread(monitor, started 140651622545152)>']
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:17,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:17,003 | INFO     | [monitor] control thread has ended
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:21,993 | INFO     | all workflow threads have been joined
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:21,993 | INFO     | end of generic workflow (traces error code: 0)
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:21,993 | INFO     | traces error code: 0
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:21,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,258 [wrapper] ==== pilot stdout END ====
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,267 [wrapper] ==== wrapper stdout RESUME ====
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,307 [wrapper] pilotpid: 5856
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,323 [wrapper] Pilot exit status: 0
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,666 [wrapper] pandaids: 6665675531
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,712 [wrapper] cleanup supervisor_pilot  5862 5857
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,720 [wrapper] Test setup, not cleaning
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,728 [wrapper] apfmon messages muted
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,737 [wrapper] ==== wrapper stdout END ====
2025-05-25 03:29:24 (15124): Guest Log: 2025-05-25 01:29:22,745 [wrapper] ==== wrapper stderr END ====
2025-05-25 03:29:24 (15124): Guest Log:  *** Error codes and diagnostics ***
2025-05-25 03:29:24 (15124): Guest Log:     "exeErrorCode": 65,
2025-05-25 03:29:24 (15124): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5364.59 KB/s",
2025-05-25 03:29:24 (15124): Guest Log:     "pilotErrorCode": 1305,
2025-05-25 03:29:24 (15124): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 5364.59 KB/s",
2025-05-25 03:29:24 (15124): Guest Log:  *** Listing of results directory ***
2025-05-25 03:29:24 (15124): Guest Log: total 4232
2025-05-25 03:29:24 (15124): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 24 16:47 pilot3.tar.gz
2025-05-25 03:29:24 (15124): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 24 17:26 queuedata.json
2025-05-25 03:29:24 (15124): Guest Log: -rwx------. 1 atlas atlas   37140 May 24 17:26 runpilot2-wrapper.sh
2025-05-25 03:29:24 (15124): Guest Log: -rwxr-xr-x. 1 atlas atlas    8837 May 25 01:13 init_data.xml
2025-05-25 03:29:24 (15124): Guest Log: -rwxr-xr-x. 1 atlas atlas  508878 May 25 01:13 input.tar.gz
2025-05-25 03:29:24 (15124): Guest Log: -rwxr-xr-x. 1 atlas atlas   15093 May 25 01:13 start_atlas.sh
2025-05-25 03:29:24 (15124): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 25 01:13 EVNT.44871834._000840.pool.root.1 -> /data/./ATLAS.root_0
2025-05-25 03:29:24 (15124): Guest Log: -rw-r--r--. 1 atlas atlas    2558 May 25 01:13 pandaJob.out
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas  990811 May 25 01:16 agis_schedconf.cvmfs.json
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas 1596740 May 25 01:16 agis_ddmendpoints.agis.ALL.json
2025-05-25 03:29:24 (15124): Guest Log: drwx------. 4 atlas atlas    4096 May 25 01:17 pilot3
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas   53476 May 25 01:26 log.44871837._021085.job.log.tgz.1
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas      95 May 25 01:28 pilot_heartbeat.json
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas    8259 May 25 01:29 heartbeat.json
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas    4599 May 25 01:29 pilotlog.txt
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas  230579 May 25 01:29 log.44871837._021085.job.log.1
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas     188 May 25 01:29 output.list
2025-05-25 03:29:24 (15124): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 25 01:29 runtime_log
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas  307200 May 25 01:29 result.tar.gz
2025-05-25 03:29:24 (15124): Guest Log: -rw-------. 1 atlas atlas     642 May 25 01:29 z9ALDmxo7c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmL4MKDmM64eZm.diag
2025-05-25 03:29:24 (15124): Guest Log: -rw-r--r--. 1 atlas atlas    8433 May 25 01:29 runtime_log.err
2025-05-25 03:29:24 (15124): Guest Log: Looking for outputfile HITS.44871837._021085.pool.root.1
2025-05-25 03:29:24 (15124): Guest Log: No HITS file was produced
2025-05-25 03:29:24 (15124): Guest Log: Successfully finished the ATLAS job!
2025-05-25 03:29:24 (15124): Guest Log: Copying the results back to the shared directory!
2025-05-25 03:29:24 (15124): Guest Log:  *** Contents of shared directory: ***
2025-05-25 03:29:24 (15124): Guest Log: total 220968
2025-05-25 03:29:24 (15124): Guest Log: -rwxrwxrwx. 1 root root 225420178 May 25 01:12 ATLAS.root_0
2025-05-25 03:29:24 (15124): Guest Log: -rwxrwxrwx. 1 root root      8837 May 25 01:12 init_data.xml
2025-05-25 03:29:24 (15124): Guest Log: -rwxrwxrwx. 1 root root    508878 May 24 23:16 input.tar.gz
2025-05-25 03:29:24 (15124): Guest Log: -rwxrwxrwx. 1 root root    307200 May 25 01:29 result.tar.gz
2025-05-25 03:29:24 (15124): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 23:16 start_atlas.sh
2025-05-25 03:29:24 (15124): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-25 03:29:24 (15124): VM Completion File Detected.
2025-05-25 03:29:24 (15124): Powering off VM.
2025-05-25 03:29:25 (15124): Successfully stopped VM.
2025-05-25 03:29:25 (15124): Deregistering VM. (boinc_1c92a1a6d632cf07, slot#2)
2025-05-25 03:29:25 (15124): Removing network bandwidth throttle group from VM.
2025-05-25 03:29:25 (15124): Removing VM from VirtualBox.
03:29:30 (15124): called boinc_finish(0)

</stderr_txt>
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