Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:43 (396778): wrapper (7.7.26015): starting
16:26:43 (396778): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 16:26:43] Arguments: --nthreads 12
[2025-05-24 16:26:43] Threads: 12
[2025-05-24 16:26:43] Checking for CVMFS
[2025-05-24 16:26:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 16:26:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 16:26:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 16:26:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 16:26:43] 2.11.5.0 2773151 18009 252196 146383 0 387 32595488 45568000 18566 130560 0 182326957 99.773 126410917 28046 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 16:26:43] CVMFS is ok
[2025-05-24 16:26:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 16:26:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 16:26:43] Further information can be found at the LHC@home message board.
[2025-05-24 16:26:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:26:43] Checking for apptainer binary...
[2025-05-24 16:26:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 16:26:43] Running /usr/bin/apptainer --version
[2025-05-24 16:26:43] apptainer version 1.4.0-1.el9
[2025-05-24 16:26:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:26:43] wns0090.triumf.lcg
[2025-05-24 16:26:43] apptainer works
[2025-05-24 16:26:43] Set ATHENA_PROC_NUMBER=12
[2025-05-24 16:26:43] Set ATHENA_CORE_NUMBER=12
[2025-05-24 16:26:43] Starting ATLAS job with PandaID=6665679383
[2025-05-24 16:26:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 16:29:54]  *** The last 200 lines of the pilot log: ***
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | found no stored workdir sizes
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | WARNING  | wrong length of table data, x=[1748129239.0], y=[1260.0] (must be same and length>=4)
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | ..............................
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . Timing measurements:
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . get job = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . initial setup = 2 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . payload setup = 6 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . stage-in = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . payload execution = 18 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . stage-out = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . log creation = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | ..............................
[2025-05-24 16:29:54] 2025-05-24 23:29:39,733 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 16:29:54] 2025-05-24 23:29:39,733 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665679383/pilotlog.txt
[2025-05-24 16:29:54] 2025-05-24 23:29:39,743 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 16:29:54] - Log from pilotlog.txt -
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | INFO     | extracted standard info from prmon json
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | found no stored workdir sizes
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | WARNING  | wrong length of table data, x=[1748129239.0], y=[1260.0] (must be same and length>=4)
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | ..............................
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . Timing measurements:
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . get job = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . initial setup = 2 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . payload setup = 6 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . stage-in = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . payload execution = 18 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . stage-out = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . log creation = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | ..............................
[2025-05-24 16:29:54] 2025-05-24 23:29:39,733 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 16:29:54] 2025-05-24 23:29:39,733 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665679383/pilotlog.txt
[2025-05-24 16:29:54] 2025-05-24 23:29:39,744 | WARNING  | 
[2025-05-24 16:29:54] [begin log extracts]
[2025-05-24 16:29:54] - Log from pilotlog.txt -
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | INFO     | extracted standard info from prmon json
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 16:29:54] 2025-05-24 23:29:39,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | WARNING  | found no stored workdir sizes
[2025-05-24 16:29:54] 2025-05-24 23:29:39,731 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | WARNING  | wrong length of table data, x=[1748129239.0], y=[1260.0] (must be same and length>=4)
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | ..............................
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . Timing measurements:
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . get job = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . initial setup = 2 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . payload setup = 6 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . stage-in = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . payload execution = 18 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . stage-out = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | . log creation = 0 s
[2025-05-24 16:29:54] 2025-05-24 23:29:39,732 | INFO     | ..............................
[2025-05-24 16:29:54] 2025-05-24 23:29:39,733 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 16:29:54] 2025-05-24 23:29:39,733 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665679383/pilotlog.txt
[2025-05-24 16:29:54] [end log extracts]
[2025-05-24 16:29:54] 2025-05-24 23:29:39,744 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 16:29:54] 2025-05-24 23:29:39,745 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | 
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | job summary report
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | --------------------------------------------------
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | PanDA job id: 6665679383
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | task id: 44871837
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 16:27:28,430 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | pilot state: failed 
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | transexitcode: 65
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | exeerrorcode: 65
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | exitcode: 65
[2025-05-24 16:29:54] 2025-05-24 23:29:40,170 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | cpuconsumptiontime: 16 s
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | nevents: 0
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | neventsw: 0
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | pid: 414293
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | pgrp: 414293
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | corecount: 12
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | event service: False
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | sizes: {0: 2393565, 1: 2393764, 4: 2393970, 11: 2393998, 28: 2417405, 29: 2421772, 32: 2421772, 152: 2421914}
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | --------------------------------------------------
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | 
[2025-05-24 16:29:54] 2025-05-24 23:29:40,171 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 16:29:54] 2025-05-24 23:29:40,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 16:29:54] 2025-05-24 23:29:40,188 | INFO     | job 6665679383 has completed (purged errors)
[2025-05-24 16:29:54] 2025-05-24 23:29:40,189 | INFO     | overall cleanup function is called
[2025-05-24 16:29:54] 2025-05-24 23:29:41,194 | INFO     | --- collectZombieJob: --- 10, [414293]
[2025-05-24 16:29:54] 2025-05-24 23:29:41,194 | INFO     | zombie collector waiting for pid 414293
[2025-05-24 16:29:54] 2025-05-24 23:29:41,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 16:29:54] 2025-05-24 23:29:41,195 | INFO     | collected zombie processes
[2025-05-24 16:29:54] 2025-05-24 23:29:41,195 | INFO     | will attempt to kill all subprocesses of pid=414293
[2025-05-24 16:29:54] 2025-05-24 23:29:41,387 | INFO     | process IDs to be killed: [414293] (in reverse order)
[2025-05-24 16:29:54] 2025-05-24 23:29:41,461 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 16:29:54] 2025-05-24 23:29:41,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 16:29:54] 2025-05-24 23:29:41,469 | INFO     | did not find any defunct processes belonging to 414293
[2025-05-24 16:29:54] 2025-05-24 23:29:41,477 | INFO     | did not find any defunct processes belonging to 414293
[2025-05-24 16:29:54] 2025-05-24 23:29:41,477 | INFO     | ready for new job
[2025-05-24 16:29:54] 2025-05-24 23:29:41,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 16:29:54] 2025-05-24 23:29:41,478 | INFO     | **************************************
[2025-05-24 16:29:54] 2025-05-24 23:29:41,479 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 16:29:54] 2025-05-24 23:29:41,479 | INFO     | **************************************
[2025-05-24 16:29:54] 2025-05-24 23:29:41,479 | INFO     | 
[2025-05-24 16:29:54] 2025-05-24 23:29:41,481 | INFO     | architecture information:
[2025-05-24 16:29:54] 2025-05-24 23:29:41,481 | INFO     | executing command: cat /etc/os-release
[2025-05-24 16:29:54] 2025-05-24 23:29:41,492 | INFO     | cat /etc/os-release:
[2025-05-24 16:29:54] NAME="CentOS Linux"
[2025-05-24 16:29:54] VERSION="7 (Core)"
[2025-05-24 16:29:54] ID="centos"
[2025-05-24 16:29:54] ID_LIKE="rhel fedora"
[2025-05-24 16:29:54] VERSION_ID="7"
[2025-05-24 16:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 16:29:54] ANSI_COLOR="0;31"
[2025-05-24 16:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 16:29:54] HOME_URL="https://www.centos.org/"
[2025-05-24 16:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 16:29:54] 
[2025-05-24 16:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 16:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 16:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 16:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 16:29:54] 
[2025-05-24 16:29:54] 2025-05-24 23:29:41,492 | INFO     | **************************************
[2025-05-24 16:29:54] 2025-05-24 23:29:41,994 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 16:29:54] 2025-05-24 23:29:42,016 | INFO     | sufficient remaining disk space (1997417742336 B)
[2025-05-24 16:29:54] 2025-05-24 23:29:42,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 16:29:54] 2025-05-24 23:29:42,017 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 16:29:54] 2025-05-24 23:29:42,017 | INFO     | update_server=False
[2025-05-24 16:29:54] 2025-05-24 23:29:42,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 16:29:54] 2025-05-24 23:29:42,020 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 16:29:54] 2025-05-24 23:29:42,020 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 16:29:54] 2025-05-24 23:29:42,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 16:29:54] 2025-05-24 23:29:42,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 16:29:54] 2025-05-24 23:29:42,145 | INFO     | all data control threads have been joined
[2025-05-24 16:29:54] 2025-05-24 23:29:42,152 | INFO     | all payload control threads have been joined
[2025-05-24 16:29:54] 2025-05-24 23:29:42,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:29:54] 2025-05-24 23:29:42,217 | INFO     | aborting loop
[2025-05-24 16:29:54] 2025-05-24 23:29:42,505 | INFO     | all job control threads have been joined
[2025-05-24 16:29:54] 2025-05-24 23:29:42,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 16:29:54] 2025-05-24 23:29:43,022 | INFO     | [job] retrieve thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,151 | INFO     | [data] control thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,158 | INFO     | [payload] control thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,203 | INFO     | [data] copytool_in thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,208 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,222 | INFO     | [job] job monitor thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 16:29:54] 2025-05-24 23:29:43,510 | INFO     | [job] control thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:43,728 | INFO     | [payload] validate_post thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:44,281 | INFO     | [job] validate thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:44,388 | INFO     | [payload] failed_post thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:44,416 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:44,505 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:44,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:29:54] 2025-05-24 23:29:44,875 | INFO     | [data] copytool_out thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:45,828 | INFO     | [job] queue monitor thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:47,452 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 16:29:54] 2025-05-24 23:29:49,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497975801664)>', '<ExcThread(monitor, started 140497297336064)>']
[2025-05-24 16:29:54] 2025-05-24 23:29:50,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 16:29:54] 2025-05-24 23:29:50,062 | INFO     | [monitor] control thread has ended
[2025-05-24 16:29:54] 2025-05-24 23:29:54,417 | INFO     | all workflow threads have been joined
[2025-05-24 16:29:54] 2025-05-24 23:29:54,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 16:29:54] 2025-05-24 23:29:54,418 | INFO     | traces error code: 0
[2025-05-24 16:29:54] 2025-05-24 23:29:54,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 16:29:54] 2025-05-24 23:29:54,529 [wrapper] ==== pilot stdout END ====
[2025-05-24 16:29:54] 2025-05-24 23:29:54,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 16:29:54] 2025-05-24 23:29:54,533 [wrapper] pilotpid: 400921
[2025-05-24 16:29:54] 2025-05-24 23:29:54,535 [wrapper] Pilot exit status: 0
[2025-05-24 16:29:54] 2025-05-24 23:29:54,543 [wrapper] pandaids: 6665679383
[2025-05-24 16:29:54] 2025-05-24 23:29:54,588 [wrapper] cleanup supervisor_pilot  400935 400922
[2025-05-24 16:29:54] 2025-05-24 23:29:54,591 [wrapper] Test setup, not cleaning
[2025-05-24 16:29:54] 2025-05-24 23:29:54,593 [wrapper] apfmon messages muted
[2025-05-24 16:29:54] 2025-05-24 23:29:54,595 [wrapper] ==== wrapper stdout END ====
[2025-05-24 16:29:54] 2025-05-24 23:29:54,597 [wrapper] ==== wrapper stderr END ====
[2025-05-24 16:29:54]  *** Error codes and diagnostics ***
[2025-05-24 16:29:54]     "exeErrorCode": 65,
[2025-05-24 16:29:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 16:29:54]     "pilotErrorCode": 1305,
[2025-05-24 16:29:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 16:29:54]  *** Listing of results directory ***
[2025-05-24 16:29:54] total 223852
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc    495897 May 24 12:53 pilot3.tar.gz
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc      5111 May 24 13:29 queuedata.json
[2025-05-24 16:29:54] -rwx------. 1 boinc boinc     37140 May 24 13:30 runpilot2-wrapper.sh
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc       100 May 24 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 16:29:54] -rwxr-xr-x. 1 boinc boinc      7986 May 24 16:26 run_atlas
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc       105 May 24 16:26 job.xml
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc      6602 May 24 16:26 init_data.xml
[2025-05-24 16:29:54] -rw-r--r--. 2 boinc boinc 225202416 May 24 16:26 EVNT.44871834._000940.pool.root.1
[2025-05-24 16:29:54] -rw-r--r--. 2 boinc boinc     15093 May 24 16:26 start_atlas.sh
[2025-05-24 16:29:54] drwxrwx--x. 2 boinc boinc      4096 May 24 16:26 shared
[2025-05-24 16:29:54] -rw-r--r--. 2 boinc boinc    508882 May 24 16:26 input.tar.gz
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc         0 May 24 16:26 boinc_lockfile
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc      2558 May 24 16:26 pandaJob.out
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc    990811 May 24 16:26 agis_schedconf.cvmfs.json
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc   1596740 May 24 16:26 agis_ddmendpoints.agis.ALL.json
[2025-05-24 16:29:54] drwx------. 4 boinc boinc      4096 May 24 16:26 pilot3
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc       521 May 24 16:27 boinc_task_state.xml
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc       988 May 24 16:27 memory_monitor_summary.json
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc     20579 May 24 16:27 log.44871837._023595.job.log.tgz.1
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc        95 May 24 16:28 pilot_heartbeat.json
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc      8357 May 24 16:29 heartbeat.json
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc      8192 May 24 16:29 boinc_mmap_file
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc        22 May 24 16:29 wrapper_checkpoint.txt
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc      4475 May 24 16:29 pilotlog.txt
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc     74050 May 24 16:29 log.44871837._023595.job.log.1
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc       188 May 24 16:29 output.list
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc       620 May 24 16:29 runtime_log
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc    112640 May 24 16:29 result.tar.gz
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc       646 May 24 16:29 yL5MDmrgAd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKXSKDm4lHtjm.diag
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc      8484 May 24 16:29 runtime_log.err
[2025-05-24 16:29:54] -rw-r--r--. 1 boinc boinc     21485 May 24 16:29 stderr.txt
[2025-05-24 16:29:54] No HITS result produced
[2025-05-24 16:29:54]  *** Contents of shared directory: ***
[2025-05-24 16:29:54] total 220556
[2025-05-24 16:29:54] -rw-r--r--. 2 boinc boinc 225202416 May 24 16:26 ATLAS.root_0
[2025-05-24 16:29:54] -rw-r--r--. 2 boinc boinc     15093 May 24 16:26 start_atlas.sh
[2025-05-24 16:29:54] -rw-r--r--. 2 boinc boinc    508882 May 24 16:26 input.tar.gz
[2025-05-24 16:29:54] -rw-------. 1 boinc boinc    112640 May 24 16:29 result.tar.gz
16:29:56 (396778): run_atlas exited; CPU time 20.060357
16:29:56 (396778): called boinc_finish(0)

</stderr_txt>
]]>

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