Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:57 (23355): wrapper (7.7.26015): starting
18:40:57 (23355): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 18:40:57] Arguments: --nthreads 8
[2025-05-24 18:40:57] Threads: 8
[2025-05-24 18:40:57] Checking for CVMFS
[2025-05-24 18:40:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 18:40:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 18:40:58] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 18:40:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 18:40:58] 2.11.2.0 5200 13555 215992 146382 3 561 17305677 18432001 18993 130560 0 68020270 99.425 79337429 50009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 18:40:58] CVMFS is ok
[2025-05-24 18:40:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 18:40:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 18:40:58] Further information can be found at the LHC@home message board.
[2025-05-24 18:40:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 18:40:58] Checking for apptainer binary...
[2025-05-24 18:40:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 18:40:58] Running /usr/bin/apptainer --version
[2025-05-24 18:40:59] apptainer version 1.3.2-1.el7
[2025-05-24 18:40:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 18:41:08] c-212-5.aglt2.org
[2025-05-24 18:41:08] apptainer works
[2025-05-24 18:41:08] Set ATHENA_PROC_NUMBER=8
[2025-05-24 18:41:08] Set ATHENA_CORE_NUMBER=8
[2025-05-24 18:41:08] Starting ATLAS job with PandaID=6665629942
[2025-05-24 18:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 23:55:35]  *** The last 200 lines of the pilot log: ***
[2025-05-24 23:55:35] 2025-05-25 03:55:20,378 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 23:55:35] 2025-05-25 03:55:20,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 23:55:35] 2025-05-25 03:55:20,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 23:55:35] 2025-05-25 03:55:20,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 23:55:35] 2025-05-25 03:55:20,383 | INFO     | fitting pss+swap vs Time
[2025-05-24 23:55:35] 2025-05-25 03:55:20,383 | INFO     | sum of square deviations: 8884523856.457514
[2025-05-24 23:55:35] 2025-05-25 03:55:20,385 | INFO     | sum of deviations: 60599700753.13073
[2025-05-24 23:55:35] 2025-05-25 03:55:20,385 | INFO     | mean x: 1748135938.5816994
[2025-05-24 23:55:35] 2025-05-25 03:55:20,385 | INFO     | mean y: 2475243.094771242
[2025-05-24 23:55:35] 2025-05-25 03:55:20,385 | INFO     | -- intersect: -11921237998.65051
[2025-05-24 23:55:35] 2025-05-25 03:55:20,385 | INFO     | intersect: -11921237998.65051
[2025-05-24 23:55:35] 2025-05-25 03:55:20,386 | INFO     | chi2: 1.5679242813273675
[2025-05-24 23:55:35] 2025-05-25 03:55:20,386 | INFO     | sum of square deviations: 8456086238.923543
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | sum of deviations: 59439755845.019936
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | mean x: 1748135786.0830564
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | mean y: 2474830.2392026577
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | -- intersect: -12285569706.301195
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | intersect: -12285569706.301195
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | chi2: 1.5682237284746614
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | current chi2=1.5682237284746614 (change=-0.019098316854969724 %)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,388 | INFO     | right removable region: 300
[2025-05-24 23:55:35] 2025-05-25 03:55:20,389 | INFO     | sum of square deviations: 8456070988.923543
[2025-05-24 23:55:35] 2025-05-25 03:55:20,390 | INFO     | sum of deviations: 8846714199.524918
[2025-05-24 23:55:35] 2025-05-25 03:55:20,390 | INFO     | mean x: 1748136091.0830564
[2025-05-24 23:55:35] 2025-05-25 03:55:20,391 | INFO     | mean y: 2493548.299003322
[2025-05-24 23:55:35] 2025-05-25 03:55:20,391 | INFO     | -- intersect: -1826400792.8133323
[2025-05-24 23:55:35] 2025-05-25 03:55:20,391 | INFO     | intersect: -1826400792.8133323
[2025-05-24 23:55:35] 2025-05-25 03:55:20,391 | INFO     | chi2: 0.02130182802305679
[2025-05-24 23:55:35] 2025-05-25 03:55:20,391 | INFO     | current chi2=0.02130182802305679 (change=98.64139944277008 %)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,391 | INFO     | sum of square deviations: 8041618383.888491
[2025-05-24 23:55:35] 2025-05-25 03:55:20,393 | INFO     | sum of deviations: 4893730268.317568
[2025-05-24 23:55:35] 2025-05-25 03:55:20,393 | INFO     | mean x: 1748136243.5844595
[2025-05-24 23:55:35] 2025-05-25 03:55:20,393 | INFO     | mean y: 2494988.5472972975
[2025-05-24 23:55:35] 2025-05-25 03:55:20,393 | INFO     | -- intersect: -1061334061.7732369
[2025-05-24 23:55:35] 2025-05-25 03:55:20,393 | INFO     | intersect: -1061334061.7732369
[2025-05-24 23:55:35] 2025-05-25 03:55:20,394 | INFO     | chi2: 0.004987325889581023
[2025-05-24 23:55:35] 2025-05-25 03:55:20,394 | INFO     | current chi2=0.004987325889581023 (change=76.58733379979026 %)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,394 | INFO     | sum of square deviations: 7640933478.852218
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | sum of deviations: 5430237670.896908
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | mean x: 1748136396.0859106
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | mean y: 2494782.8041237113
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | -- intersect: -1239866001.7995958
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | intersect: -1239866001.7995958
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | chi2: 0.004659668777962091
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | current chi2=0.004659668777962091 (change=6.569795495085608 %)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | left removable region: 30
[2025-05-24 23:55:35] 2025-05-25 03:55:20,396 | INFO     | sum of square deviations: 6103169991.185176
[2025-05-24 23:55:35] 2025-05-25 03:55:20,398 | INFO     | sum of deviations: 8588332504.888889
[2025-05-24 23:55:35] 2025-05-25 03:55:20,398 | INFO     | mean x: 1748136670.5925925
[2025-05-24 23:55:35] 2025-05-25 03:55:20,398 | INFO     | mean y: 2493211.5444444446
[2025-05-24 23:55:35] 2025-05-25 03:55:20,398 | INFO     | -- intersect: -2457470874.7783604
[2025-05-24 23:55:35] 2025-05-25 03:55:20,398 | INFO     | intersect: -2457470874.7783604
[2025-05-24 23:55:35] 2025-05-25 03:55:20,398 | INFO     | chi2: 0.0015364304835797755
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | -- intersect: -2457470874.7783604
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | current memory leak: 1.41 B/s (using 270 data points, chi2=0.00)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | ..............................
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | . Timing measurements:
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | . get job = 0 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | . initial setup = 4 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | . payload setup = 21 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,399 | INFO     | . stage-in = 0 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,400 | INFO     | . payload execution = 18685 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,400 | INFO     | . stage-out = 2 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,400 | INFO     | . log creation = 0 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,400 | INFO     | ..............................
[2025-05-24 23:55:35] 2025-05-25 03:55:20,710 | INFO     | 
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | job summary report
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | --------------------------------------------------
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | PanDA job id: 6665629942
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | task id: 44871837
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | errors: (none)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | pilot state: finished 
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | transexitcode: 0
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | exeerrorcode: 0
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | exeerrordiag: 
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | exitcode: 0
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | exitmsg: OK
[2025-05-24 23:55:35] 2025-05-25 03:55:20,711 | INFO     | cpuconsumptiontime: 45013 s
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | nevents: 400
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | neventsw: 0
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | pid: 63384
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | pgrp: 63384
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | corecount: 8
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | event service: False
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | sizes: {0: 2393739, 1: 2393739, 12: 2393767, 22: 2393795, 24: 2394029, 33: 2394057, 18710: 2427016, 18713: 2436013, 18728: 2436127}
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | --------------------------------------------------
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | 
[2025-05-24 23:55:35] 2025-05-25 03:55:20,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 23:55:35] 2025-05-25 03:55:20,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 23:55:35] 2025-05-25 03:55:20,735 | INFO     | job 6665629942 has completed (purged errors)
[2025-05-24 23:55:35] 2025-05-25 03:55:20,736 | INFO     | overall cleanup function is called
[2025-05-24 23:55:35] 2025-05-25 03:55:21,743 | INFO     | --- collectZombieJob: --- 10, [63384]
[2025-05-24 23:55:35] 2025-05-25 03:55:21,743 | INFO     | zombie collector waiting for pid 63384
[2025-05-24 23:55:35] 2025-05-25 03:55:21,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 23:55:35] 2025-05-25 03:55:21,744 | INFO     | collected zombie processes
[2025-05-24 23:55:35] 2025-05-25 03:55:21,744 | INFO     | will attempt to kill all subprocesses of pid=63384
[2025-05-24 23:55:35] 2025-05-25 03:55:22,047 | INFO     | process IDs to be killed: [63384] (in reverse order)
[2025-05-24 23:55:35] 2025-05-25 03:55:22,147 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 23:55:35] 2025-05-25 03:55:22,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 23:55:35] 2025-05-25 03:55:22,157 | INFO     | did not find any defunct processes belonging to 63384
[2025-05-24 23:55:35] 2025-05-25 03:55:22,184 | INFO     | did not find any defunct processes belonging to 63384
[2025-05-24 23:55:35] 2025-05-25 03:55:22,184 | INFO     | ready for new job
[2025-05-24 23:55:35] 2025-05-25 03:55:22,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 23:55:35] 2025-05-25 03:55:22,186 | INFO     | **************************************
[2025-05-24 23:55:35] 2025-05-25 03:55:22,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 23:55:35] 2025-05-25 03:55:22,187 | INFO     | **************************************
[2025-05-24 23:55:35] 2025-05-25 03:55:22,187 | INFO     | 
[2025-05-24 23:55:35] 2025-05-25 03:55:22,200 | INFO     | architecture information:
[2025-05-24 23:55:35] 2025-05-25 03:55:22,202 | INFO     | executing command: cat /etc/os-release
[2025-05-24 23:55:35] 2025-05-25 03:55:22,231 | INFO     | cat /etc/os-release:
[2025-05-24 23:55:35] NAME="CentOS Linux"
[2025-05-24 23:55:35] VERSION="7 (Core)"
[2025-05-24 23:55:35] ID="centos"
[2025-05-24 23:55:35] ID_LIKE="rhel fedora"
[2025-05-24 23:55:35] VERSION_ID="7"
[2025-05-24 23:55:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 23:55:35] ANSI_COLOR="0;31"
[2025-05-24 23:55:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 23:55:35] HOME_URL="https://www.centos.org/"
[2025-05-24 23:55:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 23:55:35] 
[2025-05-24 23:55:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 23:55:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 23:55:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 23:55:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 23:55:35] 
[2025-05-24 23:55:35] 2025-05-25 03:55:22,232 | INFO     | **************************************
[2025-05-24 23:55:35] 2025-05-25 03:55:22,474 | INFO     | PID=38575 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 23:55:35] 2025-05-25 03:55:22,475 | INFO     | .. there are 17 such processes running
[2025-05-24 23:55:35] 2025-05-25 03:55:22,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 23:55:35] 2025-05-25 03:55:22,758 | INFO     | sufficient remaining disk space (102937657344 B)
[2025-05-24 23:55:35] 2025-05-25 03:55:22,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | INFO     | update_server=False
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 23:55:35] 2025-05-25 03:55:22,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 23:55:35] 2025-05-25 03:55:22,897 | INFO     | all job control threads have been joined
[2025-05-24 23:55:35] 2025-05-25 03:55:23,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 23:55:35] 2025-05-25 03:55:23,035 | INFO     | aborting loop
[2025-05-24 23:55:35] 2025-05-25 03:55:23,199 | INFO     | all data control threads have been joined
[2025-05-24 23:55:35] 2025-05-25 03:55:23,764 | INFO     | [job] retrieve thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:23,850 | INFO     | [payload] failed_post thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:23,903 | INFO     | [job] control thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:23,906 | INFO     | all payload control threads have been joined
[2025-05-24 23:55:35] 2025-05-25 03:55:24,039 | INFO     | [job] job monitor thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:24,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:24,205 | INFO     | [data] control thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:24,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 23:55:35] 2025-05-25 03:55:24,435 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:24,912 | INFO     | [payload] control thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:24,977 | INFO     | [data] copytool_in thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:25,085 | INFO     | [payload] validate_post thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:25,159 | INFO     | [job] validate thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:25,183 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:25,204 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:25,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 23:55:35] 2025-05-25 03:55:25,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 23:55:35] 2025-05-25 03:55:26,218 | INFO     | [data] copytool_out thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:26,490 | INFO     | [job] queue monitor thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:29,773 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 23:55:35] 2025-05-25 03:55:29,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753836754752)>', '<ExcThread(monitor, started 139753252968192)>']
[2025-05-24 23:55:35] 2025-05-25 03:55:30,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 23:55:35] 2025-05-25 03:55:30,810 | INFO     | [monitor] control thread has ended
[2025-05-24 23:55:35] 2025-05-25 03:55:34,835 | INFO     | all workflow threads have been joined
[2025-05-24 23:55:35] 2025-05-25 03:55:34,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 23:55:35] 2025-05-25 03:55:34,836 | INFO     | traces error code: 0
[2025-05-24 23:55:35] 2025-05-25 03:55:34,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 23:55:35] 2025-05-25 03:55:34,977 [wrapper] ==== pilot stdout END ====
[2025-05-24 23:55:35] 2025-05-25 03:55:34,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 23:55:35] 2025-05-25 03:55:34,982 [wrapper] pilotpid: 38575
[2025-05-24 23:55:35] 2025-05-25 03:55:34,985 [wrapper] Pilot exit status: 0
[2025-05-24 23:55:35] 2025-05-25 03:55:35,003 [wrapper] pandaids: 6665629942
[2025-05-24 23:55:35] 2025-05-25 03:55:35,074 [wrapper] cleanup supervisor_pilot 18653 38576
[2025-05-24 23:55:35] 2025-05-25 03:55:35,081 [wrapper] Test setup, not cleaning
[2025-05-24 23:55:35] 2025-05-25 03:55:35,083 [wrapper] apfmon messages muted
[2025-05-24 23:55:35] 2025-05-25 03:55:35,085 [wrapper] ==== wrapper stdout END ====
[2025-05-24 23:55:35] 2025-05-25 03:55:35,089 [wrapper] ==== wrapper stderr END ====
[2025-05-24 23:55:35]  *** Error codes and diagnostics ***
[2025-05-24 23:55:35]     "exeErrorCode": 0,
[2025-05-24 23:55:35]     "exeErrorDiag": "",
[2025-05-24 23:55:35]     "pilotErrorCode": 0,
[2025-05-24 23:55:35]     "pilotErrorDiag": "",
[2025-05-24 23:55:35]  *** Listing of results directory ***
[2025-05-24 23:55:35] total 419504
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas    495897 May 24 09:46 pilot3.tar.gz
[2025-05-24 23:55:35] -rwx------ 1 boincer umatlas     37140 May 24 10:17 runpilot2-wrapper.sh
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas      5111 May 24 10:17 queuedata.json
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas       100 May 24 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 23:55:35] -rwxr-xr-x 1 boincer umatlas      7986 May 24 18:40 run_atlas
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas       105 May 24 18:40 job.xml
[2025-05-24 23:55:35] -rw-r--r-- 2 boincer umatlas 223139066 May 24 18:40 EVNT.44871834._000749.pool.root.1
[2025-05-24 23:55:35] -rw-r--r-- 2 boincer umatlas     15093 May 24 18:40 start_atlas.sh
[2025-05-24 23:55:35] drwxrwx--x 2 boincer umatlas      4096 May 24 18:40 shared
[2025-05-24 23:55:35] -rw-r--r-- 2 boincer umatlas    508878 May 24 18:40 input.tar.gz
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas         0 May 24 18:40 boinc_lockfile
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas      2558 May 24 18:41 pandaJob.out
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas    990803 May 24 18:42 agis_schedconf.cvmfs.json
[2025-05-24 23:55:35] drwx------ 4 boincer umatlas      4096 May 24 18:42 pilot3
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas      6386 May 24 23:49 init_data.xml
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas 198511681 May 24 23:54 HITS.44871837._018788.pool.root.1
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas       531 May 24 23:54 boinc_task_state.xml
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas        95 May 24 23:54 pilot_heartbeat.json
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas      1081 May 24 23:54 memory_monitor_summary.json
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas   1596740 May 24 23:55 agis_ddmendpoints.agis.ALL.json
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas    442297 May 24 23:55 log.44871837._018788.job.log.tgz.1
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas      7752 May 24 23:55 heartbeat.json
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas      8192 May 24 23:55 boinc_mmap_file
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas        28 May 24 23:55 wrapper_checkpoint.txt
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas      4871 May 24 23:55 pilotlog.txt
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas   1602368 May 24 23:55 log.44871837._018788.job.log.1
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas       357 May 24 23:55 output.list
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas       620 May 24 23:55 runtime_log
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas   2068480 May 24 23:55 result.tar.gz
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas      8655 May 24 23:55 runtime_log.err
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas       662 May 24 23:55 9JUMDmZr4c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAtMKDmYL5isn.diag
[2025-05-24 23:55:35] -rw-r--r-- 1 boincer umatlas     21016 May 24 23:55 stderr.txt
[2025-05-24 23:55:35] HITS file was successfully produced:
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas 198511681 May 24 23:54 shared/HITS.pool.root.1
[2025-05-24 23:55:35]  *** Contents of shared directory: ***
[2025-05-24 23:55:35] total 414312
[2025-05-24 23:55:35] -rw-r--r-- 2 boincer umatlas 223139066 May 24 18:40 ATLAS.root_0
[2025-05-24 23:55:35] -rw-r--r-- 2 boincer umatlas     15093 May 24 18:40 start_atlas.sh
[2025-05-24 23:55:35] -rw-r--r-- 2 boincer umatlas    508878 May 24 18:40 input.tar.gz
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas 198511681 May 24 23:54 HITS.pool.root.1
[2025-05-24 23:55:35] -rw------- 1 boincer umatlas   2068480 May 24 23:55 result.tar.gz
23:55:36 (23355): run_atlas exited; CPU time 44448.790713
23:55:36 (23355): called boinc_finish(0)

</stderr_txt>
]]>

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