Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:32:32 (2432398): wrapper (7.7.26015): starting
11:32:32 (2432398): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 11:32:32] Arguments: --nthreads 6
[2025-05-25 11:32:32] Threads: 6
[2025-05-25 11:32:32] Checking for CVMFS
[2025-05-25 11:32:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:32:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:32:32] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:32:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:32:37] 2.11.5.0 1578993 1030 70980 146387 0 61 41645493 52428801 1858 130560 0 2359843 99.996 238372 89 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.180:3128 0
[2025-05-25 11:32:37] CVMFS is ok
[2025-05-25 11:32:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:32:37] Checking for apptainer binary...
[2025-05-25 11:32:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:32:37] Running /usr/bin/apptainer --version
[2025-05-25 11:32:37] apptainer version 1.3.5-1.el9
[2025-05-25 11:32:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:32:37] testio008
[2025-05-25 11:32:37] apptainer works
[2025-05-25 11:32:37] Set ATHENA_PROC_NUMBER=6
[2025-05-25 11:32:37] Set ATHENA_CORE_NUMBER=6
[2025-05-25 11:32:37] Starting ATLAS job with PandaID=6665632804
[2025-05-25 11:32:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 12:57:47]  *** The last 200 lines of the pilot log: ***
[2025-05-25 12:57:47] 2025-05-25 03:56:47,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:56:49,671 | INFO     | monitor loop #363: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:56:49,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:56:52,174 | INFO     | monitor loop #364: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:56:52,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:56:54,677 | INFO     | monitor loop #365: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:56:54,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:56:57,179 | INFO     | monitor loop #366: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:56:57,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:56:59,682 | INFO     | monitor loop #367: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:56:59,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:02,185 | INFO     | monitor loop #368: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:02,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:04,358 | INFO     | PID=2436098 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 12:57:47] 2025-05-25 03:57:04,359 | INFO     | .. there are 3 such processes running
[2025-05-25 12:57:47] 2025-05-25 03:57:04,688 | INFO     | monitor loop #369: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:04,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:07,191 | INFO     | monitor loop #370: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:07,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:09,693 | INFO     | monitor loop #371: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:09,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:12,196 | INFO     | monitor loop #372: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:12,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:14,699 | INFO     | monitor loop #373: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:14,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:17,201 | INFO     | monitor loop #374: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:17,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:19,703 | INFO     | monitor loop #375: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:19,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:22,205 | INFO     | monitor loop #376: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:22,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:24,708 | INFO     | monitor loop #377: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:24,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:26,463 | INFO     | PID=2436098 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 12:57:47] 2025-05-25 03:57:26,463 | INFO     | .. there are 3 such processes running
[2025-05-25 12:57:47] 2025-05-25 03:57:27,211 | INFO     | monitor loop #378: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:27,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:29,713 | INFO     | monitor loop #379: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:29,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,216 | INFO     | monitor loop #380: job 0:6665632804 is in state 'finished'
[2025-05-25 12:57:47] 2025-05-25 03:57:32,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,237 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 12:57:47] 2025-05-25 03:57:32,237 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6665632804/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,238 | INFO     | extracted standard info from prmon json
[2025-05-25 12:57:47] 2025-05-25 03:57:32,238 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 12:57:47] 2025-05-25 03:57:32,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 12:57:47] 2025-05-25 03:57:32,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 12:57:47] 2025-05-25 03:57:32,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | fitting pss+swap vs Time
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | sum of square deviations: 136095575.0
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | sum of deviations: 4237910583.9999995
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | mean x: 1748142974.5
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | mean y: 2491419.9210526315
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | -- intersect: -54433324101.47846
[2025-05-25 12:57:47] 2025-05-25 03:57:32,239 | INFO     | intersect: -54433324101.47846
[2025-05-25 12:57:47] 2025-05-25 03:57:32,240 | INFO     | chi2: 1.4919775265019584
[2025-05-25 12:57:47] 2025-05-25 03:57:32,240 | INFO     | -- intersect: -54433324101.47846
[2025-05-25 12:57:47] 2025-05-25 03:57:32,240 | INFO     | current memory leak: 31.14 B/s (using 76 data points, chi2=1.49)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,240 | INFO     | ..............................
[2025-05-25 12:57:47] 2025-05-25 03:57:32,240 | INFO     | . Timing measurements:
[2025-05-25 12:57:47] 2025-05-25 03:57:32,240 | INFO     | . get job = 0 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | . initial setup = 4 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | . payload setup = 2 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | . stage-in = 0 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | . payload execution = 5011 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | . stage-out = 0 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | . log creation = 0 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,244 | INFO     | ..............................
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | 
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | job summary report
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | --------------------------------------------------
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | PanDA job id: 6665632804
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | task id: 44871837
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | errors: (none)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | pilot state: finished 
[2025-05-25 12:57:47] 2025-05-25 03:57:32,364 | INFO     | transexitcode: 0
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | exeerrorcode: 0
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | exeerrordiag: 
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | exitcode: 0
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | exitmsg: OK
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | cpuconsumptiontime: 24989 s
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | nevents: 400
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | neventsw: 0
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | pid: 2442619
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | pgrp: 2442619
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | corecount: 6
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | event service: False
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | sizes: {0: 2393568, 1: 2393767, 2: 2393973, 11: 2394001, 5016: 2420151, 5017: 2429092, 5018: 2429276, 5074: 2429446}
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | --------------------------------------------------
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | 
[2025-05-25 12:57:47] 2025-05-25 03:57:32,365 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-25 12:57:47] 2025-05-25 03:57:32,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,373 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | job 6665632804 has completed (purged errors)
[2025-05-25 12:57:47] 2025-05-25 03:57:32,374 | INFO     | overall cleanup function is called
[2025-05-25 12:57:47] 2025-05-25 03:57:33,379 | INFO     | --- collectZombieJob: --- 10, [2442619]
[2025-05-25 12:57:47] 2025-05-25 03:57:33,379 | INFO     | zombie collector waiting for pid 2442619
[2025-05-25 12:57:47] 2025-05-25 03:57:33,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 12:57:47] 2025-05-25 03:57:33,379 | INFO     | collected zombie processes
[2025-05-25 12:57:47] 2025-05-25 03:57:33,379 | INFO     | will attempt to kill all subprocesses of pid=2442619
[2025-05-25 12:57:47] 2025-05-25 03:57:33,415 | INFO     | process IDs to be killed: [2442619] (in reverse order)
[2025-05-25 12:57:47] 2025-05-25 03:57:33,435 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 12:57:47] 2025-05-25 03:57:33,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 12:57:47] 2025-05-25 03:57:33,437 | INFO     | did not find any defunct processes belonging to 2442619
[2025-05-25 12:57:47] 2025-05-25 03:57:33,438 | INFO     | did not find any defunct processes belonging to 2442619
[2025-05-25 12:57:47] 2025-05-25 03:57:33,439 | INFO     | ready for new job
[2025-05-25 12:57:47] 2025-05-25 03:57:33,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 12:57:47] 2025-05-25 03:57:33,439 | INFO     | **************************************
[2025-05-25 12:57:47] 2025-05-25 03:57:33,439 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 12:57:47] 2025-05-25 03:57:33,439 | INFO     | **************************************
[2025-05-25 12:57:47] 2025-05-25 03:57:33,439 | INFO     | 
[2025-05-25 12:57:47] 2025-05-25 03:57:33,440 | INFO     | architecture information:
[2025-05-25 12:57:47] 2025-05-25 03:57:33,440 | INFO     | executing command: cat /etc/os-release
[2025-05-25 12:57:47] 2025-05-25 03:57:33,446 | INFO     | cat /etc/os-release:
[2025-05-25 12:57:47] NAME="CentOS Linux"
[2025-05-25 12:57:47] VERSION="7 (Core)"
[2025-05-25 12:57:47] ID="centos"
[2025-05-25 12:57:47] ID_LIKE="rhel fedora"
[2025-05-25 12:57:47] VERSION_ID="7"
[2025-05-25 12:57:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 12:57:47] ANSI_COLOR="0;31"
[2025-05-25 12:57:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 12:57:47] HOME_URL="https://www.centos.org/"
[2025-05-25 12:57:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 12:57:47] 
[2025-05-25 12:57:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 12:57:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 12:57:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 12:57:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 12:57:47] 
[2025-05-25 12:57:47] 2025-05-25 03:57:33,446 | INFO     | **************************************
[2025-05-25 12:57:47] 2025-05-25 03:57:33,948 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | INFO     | sufficient remaining disk space (283137540096 B)
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | INFO     | update_server=False
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 12:57:47] 2025-05-25 03:57:33,955 | INFO     | aborting loop
[2025-05-25 12:57:47] 2025-05-25 03:57:34,483 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 12:57:47] 2025-05-25 03:57:34,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 12:57:47] 2025-05-25 03:57:34,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 12:57:47] 2025-05-25 03:57:34,610 | INFO     | all data control threads have been joined
[2025-05-25 12:57:47] 2025-05-25 03:57:34,735 | INFO     | all payload control threads have been joined
[2025-05-25 12:57:47] 2025-05-25 03:57:34,736 | INFO     | all job control threads have been joined
[2025-05-25 12:57:47] 2025-05-25 03:57:34,960 | INFO     | [job] retrieve thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:34,961 | INFO     | [job] queue monitor thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:34,961 | INFO     | [job] job monitor thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:34,979 | INFO     | [job] validate thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,269 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,328 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,396 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,527 | INFO     | [data] copytool_in thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,616 | INFO     | [data] control thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,713 | INFO     | [payload] failed_post thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,740 | INFO     | [payload] control thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,741 | INFO     | [job] control thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:35,961 | INFO     | [data] copytool_out thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:36,157 | INFO     | [payload] validate_post thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:36,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:36,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 12:57:47] 2025-05-25 03:57:40,389 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 12:57:47] 2025-05-25 03:57:41,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692128270144)>', '<ExcThread(monitor, started 140691644606208)>']
[2025-05-25 12:57:47] 2025-05-25 03:57:42,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 12:57:47] 2025-05-25 03:57:42,522 | INFO     | [monitor] control thread has ended
[2025-05-25 12:57:47] 2025-05-25 03:57:46,859 | INFO     | all workflow threads have been joined
[2025-05-25 12:57:47] 2025-05-25 03:57:46,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 12:57:47] 2025-05-25 03:57:46,859 | INFO     | traces error code: 0
[2025-05-25 12:57:47] 2025-05-25 03:57:46,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 12:57:47] 2025-05-25 03:57:46,937 [wrapper] ==== pilot stdout END ====
[2025-05-25 12:57:47] 2025-05-25 03:57:46,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 12:57:47] 2025-05-25 03:57:46,941 [wrapper] pilotpid: 2436098
[2025-05-25 12:57:47] 2025-05-25 03:57:46,943 [wrapper] Pilot exit status: 0
[2025-05-25 12:57:47] 2025-05-25 03:57:46,950 [wrapper] pandaids: 6665632804
[2025-05-25 12:57:47] 2025-05-25 03:57:46,970 [wrapper] cleanup supervisor_pilot 2501807 2436099
[2025-05-25 12:57:47] 2025-05-25 03:57:46,972 [wrapper] Test setup, not cleaning
[2025-05-25 12:57:47] 2025-05-25 03:57:46,974 [wrapper] apfmon messages muted
[2025-05-25 12:57:47] 2025-05-25 03:57:46,975 [wrapper] ==== wrapper stdout END ====
[2025-05-25 12:57:47] 2025-05-25 03:57:46,977 [wrapper] ==== wrapper stderr END ====
[2025-05-25 12:57:47]  *** Error codes and diagnostics ***
[2025-05-25 12:57:47]     "exeErrorCode": 0,
[2025-05-25 12:57:47]     "exeErrorDiag": "",
[2025-05-25 12:57:47]     "pilotErrorCode": 0,
[2025-05-25 12:57:47]     "pilotErrorDiag": "",
[2025-05-25 12:57:47]  *** Listing of results directory ***
[2025-05-25 12:57:47] total 415400
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc    495897 May 25 01:36 pilot3.tar.gz
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc      5111 May 25 01:46 queuedata.json
[2025-05-25 12:57:47] -rwx------. 1 boinc boinc     37140 May 25 01:47 runpilot2-wrapper.sh
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc       100 May 25 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 12:57:47] -rwxr-xr-x. 1 boinc boinc      7986 May 25 11:32 run_atlas
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc       105 May 25 11:32 job.xml
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc      9509 May 25 11:32 init_data.xml
[2025-05-25 12:57:47] -rw-r--r--. 2 boinc boinc 223773455 May 25 11:32 EVNT.44871834._000824.pool.root.1
[2025-05-25 12:57:47] -rw-r--r--. 2 boinc boinc     15093 May 25 11:32 start_atlas.sh
[2025-05-25 12:57:47] drwxrwx--x. 2 boinc boinc        68 May 25 11:32 shared
[2025-05-25 12:57:47] -rw-r--r--. 2 boinc boinc    508876 May 25 11:32 input.tar.gz
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc         0 May 25 11:32 boinc_lockfile
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc      2558 May 25 11:32 pandaJob.out
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc    990803 May 25 11:32 agis_schedconf.cvmfs.json
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc   1596740 May 25 11:32 agis_ddmendpoints.agis.ALL.json
[2025-05-25 12:57:47] drwx------. 4 boinc boinc      4096 May 25 11:32 pilot3
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc 196269696 May 25 12:56 HITS.44871837._020653.pool.root.1
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc       529 May 25 12:56 boinc_task_state.xml
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc      1022 May 25 12:56 memory_monitor_summary.json
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc    269476 May 25 12:56 log.44871837._020653.job.log.tgz.1
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc        96 May 25 12:56 pilot_heartbeat.json
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc        27 May 25 12:57 wrapper_checkpoint.txt
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc      8192 May 25 12:57 boinc_mmap_file
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc      7664 May 25 12:57 heartbeat.json
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc      4354 May 25 12:57 pilotlog.txt
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc    482183 May 25 12:57 log.44871837._020653.job.log.1
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc       357 May 25 12:57 output.list
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc       620 May 25 12:57 runtime_log
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc    768000 May 25 12:57 result.tar.gz
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc      8617 May 25 12:57 runtime_log.err
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc       642 May 25 12:57 my7MDmpC7c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme1RKDm5h9A9n.diag
[2025-05-25 12:57:47] -rw-r--r--. 1 boinc boinc     22133 May 25 12:57 stderr.txt
[2025-05-25 12:57:47] HITS file was successfully produced:
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc 196269696 May 25 12:56 shared/HITS.pool.root.1
[2025-05-25 12:57:47]  *** Contents of shared directory: ***
[2025-05-25 12:57:47] total 411472
[2025-05-25 12:57:47] -rw-r--r--. 2 boinc boinc 223773455 May 25 11:32 ATLAS.root_0
[2025-05-25 12:57:47] -rw-r--r--. 2 boinc boinc     15093 May 25 11:32 start_atlas.sh
[2025-05-25 12:57:47] -rw-r--r--. 2 boinc boinc    508876 May 25 11:32 input.tar.gz
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc 196269696 May 25 12:56 HITS.pool.root.1
[2025-05-25 12:57:47] -rw-------. 1 boinc boinc    768000 May 25 12:57 result.tar.gz
12:57:48 (2432398): run_atlas exited; CPU time 25021.790267
12:57:48 (2432398): called boinc_finish(0)

</stderr_txt>
]]>

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