Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:54:17 (1731920): wrapper (7.7.26015): starting
12:54:17 (1731920): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 12:54:17] Arguments: --nthreads 6
[2025-05-25 12:54:17] Threads: 6
[2025-05-25 12:54:17] Checking for CVMFS
[2025-05-25 12:54:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 12:54:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 12:54:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 12:54:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 12:54:18] 2.11.5.0 1050432 1341 71892 146389 1 56 19202612 20971521 929 130560 0 1849593 99.993 384997 105 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 12:54:18] CVMFS is ok
[2025-05-25 12:54:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 12:54:18] Checking for apptainer binary...
[2025-05-25 12:54:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 12:54:18] Running /usr/bin/apptainer --version
[2025-05-25 12:54:18] apptainer version 1.3.6-1.el9
[2025-05-25 12:54:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 12:54:18] testio006
[2025-05-25 12:54:18] apptainer works
[2025-05-25 12:54:18] Set ATHENA_PROC_NUMBER=6
[2025-05-25 12:54:18] Set ATHENA_CORE_NUMBER=6
[2025-05-25 12:54:18] Starting ATLAS job with PandaID=6665631968
[2025-05-25 12:54:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 14:32:37]  *** The last 200 lines of the pilot log: ***
[2025-05-25 14:32:37]  filetype=log
[2025-05-25 14:32:37]  guid=20331026-a1e3-4509-9406-4b698923af9e
[2025-05-25 14:32:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-25 14:32:37]  is_altstaged=None
[2025-05-25 14:32:37]  is_tar=False
[2025-05-25 14:32:37]  lfn=log.44871837._019896.job.log.tgz.1
[2025-05-25 14:32:37]  mtime=0
[2025-05-25 14:32:37]  protocol_id=None
[2025-05-25 14:32:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 14:32:37]  replicas=None
[2025-05-25 14:32:37]  scope=mc23_13p6TeV
[2025-05-25 14:32:37]  status=None
[2025-05-25 14:32:37]  status_code=0
[2025-05-25 14:32:37]  storage_token=
[2025-05-25 14:32:37]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6665631968/log.44871837._019896.job.log.tgz.1
[2025-05-25 14:32:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/64/log.44871837._019896.job.log.tgz.1
[2025-05-25 14:32:37]  workdir=None
[2025-05-25 14:32:37] ]
[2025-05-25 14:32:37] 2025-05-25 05:32:16,684 | INFO     | transferring file log.44871837._019896.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6665631968/log.44871837._019896.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-25 14:32:37] 2025-05-25 05:32:16,684 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6665631968/log.44871837._019896.job.log.tgz.1 /var/lib/boinc/slots/0/log.44871837._019896.job
[2025-05-25 14:32:37] 2025-05-25 05:32:16,695 | INFO     | adding to output.list: log.44871837._019896.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/64/log.44871837._019896.job.log.tg
[2025-05-25 14:32:37] 2025-05-25 05:32:16,695 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 14:32:37] 2025-05-25 05:32:16,695 | INFO     | summary of transferred files:
[2025-05-25 14:32:37] 2025-05-25 05:32:16,695 | INFO     |  -- lfn=log.44871837._019896.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 14:32:37] 2025-05-25 05:32:16,696 | INFO     | stage-out finished correctly
[2025-05-25 14:32:37] 2025-05-25 05:32:20,065 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 14:32:37] 2025-05-25 05:32:20,296 | WARNING  | process 1742184 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 14:32:37] 2025-05-25 05:32:20,296 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6665631968/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 14:32:37] 2025-05-25 05:32:20,359 | INFO     | number of running child processes to parent process 1742184: 1
[2025-05-25 14:32:37] 2025-05-25 05:32:20,359 | INFO     | maximum number of monitored processes: 6
[2025-05-25 14:32:37] 2025-05-25 05:32:22,131 | INFO     | job 6665631968 has state=finished
[2025-05-25 14:32:37] 2025-05-25 05:32:22,131 | INFO     | preparing for final server update for job 6665631968 in state='finished'
[2025-05-25 14:32:37] 2025-05-25 05:32:22,132 | INFO     | this job has now completed (state=finished)
[2025-05-25 14:32:37] 2025-05-25 05:32:22,132 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 14:32:37] 2025-05-25 05:32:22,132 | INFO     | log transfer has been attempted: DONE
[2025-05-25 14:32:37] 2025-05-25 05:32:22,132 | INFO     | job 6665631968 has finished - writing final server update
[2025-05-25 14:32:37] 2025-05-25 05:32:22,132 | INFO     | total number of processed events: 400 (read)
[2025-05-25 14:32:37] 2025-05-25 05:32:22,133 | INFO     | executing command: lscpu
[2025-05-25 14:32:37] 2025-05-25 05:32:22,153 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 14:32:37] 2025-05-25 05:32:22,862 | INFO     | monitor loop #431: job 0:6665631968 is in state 'finished'
[2025-05-25 14:32:37] 2025-05-25 05:32:22,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 14:32:37] 2025-05-25 05:32:24,440 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 14:32:37] 2025-05-25 05:32:24,440 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6665631968/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 14:32:37] 2025-05-25 05:32:24,441 | INFO     | extracted standard info from prmon json
[2025-05-25 14:32:37] 2025-05-25 05:32:24,441 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 14:32:37] 2025-05-25 05:32:24,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 14:32:37] 2025-05-25 05:32:24,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 14:32:37] 2025-05-25 05:32:24,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 14:32:37] 2025-05-25 05:32:24,443 | INFO     | fitting pss+swap vs Time
[2025-05-25 14:32:37] 2025-05-25 05:32:24,443 | INFO     | sum of square deviations: 218571540.0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,443 | INFO     | sum of deviations: 7997626064.000002
[2025-05-25 14:32:37] 2025-05-25 05:32:24,443 | INFO     | mean x: 1748148294.0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | mean y: 2442209.5730337077
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | -- intersect: -63963051009.86229
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | intersect: -63963051009.86229
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | chi2: 1.116360578084783
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | -- intersect: -63963051009.86229
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | current memory leak: 36.59 B/s (using 89 data points, chi2=1.12)
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | ..............................
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | . Timing measurements:
[2025-05-25 14:32:37] 2025-05-25 05:32:24,444 | INFO     | . get job = 0 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | . initial setup = 4 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | . payload setup = 3 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | . stage-in = 0 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | . payload execution = 5830 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | . stage-out = 0 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | . log creation = 0 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,445 | INFO     | ..............................
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | 
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | job summary report
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | --------------------------------------------------
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | PanDA job id: 6665631968
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | task id: 44871837
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | errors: (none)
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | pilot state: finished 
[2025-05-25 14:32:37] 2025-05-25 05:32:24,503 | INFO     | transexitcode: 0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | exeerrorcode: 0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | exeerrordiag: 
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | exitcode: 0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | exitmsg: OK
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | cpuconsumptiontime: 30525 s
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | nevents: 400
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | neventsw: 0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | pid: 1742184
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | pgrp: 1742184
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | corecount: 6
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | event service: False
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | sizes: {0: 2393567, 1: 2393766, 3: 2393972, 11: 2394000, 5837: 2420537, 5839: 2429478, 5842: 2429662, 5846: 2429832}
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | --------------------------------------------------
[2025-05-25 14:32:37] 2025-05-25 05:32:24,504 | INFO     | 
[2025-05-25 14:32:37] 2025-05-25 05:32:24,505 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-05-25 14:32:37] 2025-05-25 05:32:24,517 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | job 6665631968 has completed (purged errors)
[2025-05-25 14:32:37] 2025-05-25 05:32:24,519 | INFO     | overall cleanup function is called
[2025-05-25 14:32:37] 2025-05-25 05:32:25,526 | INFO     | --- collectZombieJob: --- 10, [1742184]
[2025-05-25 14:32:37] 2025-05-25 05:32:25,526 | INFO     | zombie collector waiting for pid 1742184
[2025-05-25 14:32:37] 2025-05-25 05:32:25,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 14:32:37] 2025-05-25 05:32:25,526 | INFO     | collected zombie processes
[2025-05-25 14:32:37] 2025-05-25 05:32:25,526 | INFO     | will attempt to kill all subprocesses of pid=1742184
[2025-05-25 14:32:37] 2025-05-25 05:32:25,599 | INFO     | process IDs to be killed: [1742184] (in reverse order)
[2025-05-25 14:32:37] 2025-05-25 05:32:25,633 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 14:32:37] 2025-05-25 05:32:25,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 14:32:37] 2025-05-25 05:32:25,636 | INFO     | did not find any defunct processes belonging to 1742184
[2025-05-25 14:32:37] 2025-05-25 05:32:25,639 | INFO     | did not find any defunct processes belonging to 1742184
[2025-05-25 14:32:37] 2025-05-25 05:32:25,640 | INFO     | ready for new job
[2025-05-25 14:32:37] 2025-05-25 05:32:25,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 14:32:37] 2025-05-25 05:32:25,641 | INFO     | **************************************
[2025-05-25 14:32:37] 2025-05-25 05:32:25,641 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 14:32:37] 2025-05-25 05:32:25,641 | INFO     | **************************************
[2025-05-25 14:32:37] 2025-05-25 05:32:25,641 | INFO     | 
[2025-05-25 14:32:37] 2025-05-25 05:32:25,642 | INFO     | architecture information:
[2025-05-25 14:32:37] 2025-05-25 05:32:25,642 | INFO     | executing command: cat /etc/os-release
[2025-05-25 14:32:37] 2025-05-25 05:32:25,651 | INFO     | cat /etc/os-release:
[2025-05-25 14:32:37] NAME="CentOS Linux"
[2025-05-25 14:32:37] VERSION="7 (Core)"
[2025-05-25 14:32:37] ID="centos"
[2025-05-25 14:32:37] ID_LIKE="rhel fedora"
[2025-05-25 14:32:37] VERSION_ID="7"
[2025-05-25 14:32:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 14:32:37] ANSI_COLOR="0;31"
[2025-05-25 14:32:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 14:32:37] HOME_URL="https://www.centos.org/"
[2025-05-25 14:32:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 14:32:37] 
[2025-05-25 14:32:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 14:32:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 14:32:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 14:32:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 14:32:37] 
[2025-05-25 14:32:37] 2025-05-25 05:32:25,652 | INFO     | **************************************
[2025-05-25 14:32:37] 2025-05-25 05:32:26,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-05-25 14:32:37] 2025-05-25 05:32:26,166 | INFO     | sufficient remaining disk space (77685850112 B)
[2025-05-25 14:32:37] 2025-05-25 05:32:26,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 14:32:37] 2025-05-25 05:32:26,167 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 14:32:37] 2025-05-25 05:32:26,167 | INFO     | update_server=False
[2025-05-25 14:32:37] 2025-05-25 05:32:26,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 14:32:37] 2025-05-25 05:32:26,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 14:32:37] 2025-05-25 05:32:26,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 14:32:37] 2025-05-25 05:32:26,173 | INFO     | all payload control threads have been joined
[2025-05-25 14:32:37] 2025-05-25 05:32:26,322 | INFO     | all data control threads have been joined
[2025-05-25 14:32:37] 2025-05-25 05:32:26,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 14:32:37] 2025-05-25 05:32:26,370 | INFO     | aborting loop
[2025-05-25 14:32:37] 2025-05-25 05:32:26,980 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 14:32:37] 2025-05-25 05:32:26,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 14:32:37] 2025-05-25 05:32:26,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 14:32:37] 2025-05-25 05:32:27,172 | INFO     | [job] retrieve thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:27,172 | INFO     | [job] queue monitor thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:27,178 | INFO     | [payload] control thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:27,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 14:32:37] 2025-05-25 05:32:27,327 | INFO     | [data] control thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:27,375 | INFO     | [job] job monitor thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:27,589 | INFO     | [payload] validate_post thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:27,668 | INFO     | all job control threads have been joined
[2025-05-25 14:32:37] 2025-05-25 05:32:27,789 | INFO     | [data] copytool_in thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,049 | INFO     | [job] validate thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,085 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,229 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,294 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,514 | INFO     | [payload] failed_post thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:28,674 | INFO     | [job] control thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:29,265 | INFO     | [data] copytool_out thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:30,173 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 14:32:37] 2025-05-25 05:32:32,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808941045568)>', '<ExcThread(monitor, started 139808215127808)>']
[2025-05-25 14:32:37] 2025-05-25 05:32:33,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 14:32:37] 2025-05-25 05:32:33,010 | INFO     | [monitor] control thread has ended
[2025-05-25 14:32:37] 2025-05-25 05:32:37,093 | INFO     | all workflow threads have been joined
[2025-05-25 14:32:37] 2025-05-25 05:32:37,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 14:32:37] 2025-05-25 05:32:37,093 | INFO     | traces error code: 0
[2025-05-25 14:32:37] 2025-05-25 05:32:37,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 14:32:37] 2025-05-25 05:32:37,167 [wrapper] ==== pilot stdout END ====
[2025-05-25 14:32:37] 2025-05-25 05:32:37,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 14:32:37] 2025-05-25 05:32:37,171 [wrapper] pilotpid: 1735632
[2025-05-25 14:32:37] 2025-05-25 05:32:37,173 [wrapper] Pilot exit status: 0
[2025-05-25 14:32:37] 2025-05-25 05:32:37,179 [wrapper] pandaids: 6665631968
[2025-05-25 14:32:37] 2025-05-25 05:32:37,198 [wrapper] cleanup supervisor_pilot 1780066 1735633
[2025-05-25 14:32:37] 2025-05-25 05:32:37,200 [wrapper] Test setup, not cleaning
[2025-05-25 14:32:37] 2025-05-25 05:32:37,202 [wrapper] apfmon messages muted
[2025-05-25 14:32:37] 2025-05-25 05:32:37,204 [wrapper] ==== wrapper stdout END ====
[2025-05-25 14:32:37] 2025-05-25 05:32:37,205 [wrapper] ==== wrapper stderr END ====
[2025-05-25 14:32:37]  *** Error codes and diagnostics ***
[2025-05-25 14:32:37]     "exeErrorCode": 0,
[2025-05-25 14:32:37]     "exeErrorDiag": "",
[2025-05-25 14:32:37]     "pilotErrorCode": 0,
[2025-05-25 14:32:37]     "pilotErrorDiag": "",
[2025-05-25 14:32:37]  *** Listing of results directory ***
[2025-05-25 14:32:37] total 417924
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc    495897 May 25 00:44 pilot3.tar.gz
[2025-05-25 14:32:37] -rwx------. 1 boinc boinc     37140 May 25 00:57 runpilot2-wrapper.sh
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc      5111 May 25 00:57 queuedata.json
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc       100 May 25 12:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 14:32:37] -rwxr-xr-x. 1 boinc boinc      7986 May 25 12:54 run_atlas
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc       105 May 25 12:54 job.xml
[2025-05-25 14:32:37] -rw-r--r--. 2 boinc boinc 227540459 May 25 12:54 EVNT.44871834._000793.pool.root.1
[2025-05-25 14:32:37] -rw-r--r--. 2 boinc boinc     15093 May 25 12:54 start_atlas.sh
[2025-05-25 14:32:37] drwxrwx--x. 2 boinc boinc        68 May 25 12:54 shared
[2025-05-25 14:32:37] -rw-r--r--. 2 boinc boinc    508869 May 25 12:54 input.tar.gz
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc      9464 May 25 12:54 init_data.xml
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc         0 May 25 12:54 boinc_lockfile
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc      2557 May 25 12:54 pandaJob.out
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc    990803 May 25 12:54 agis_schedconf.cvmfs.json
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc   1596740 May 25 12:54 agis_ddmendpoints.agis.ALL.json
[2025-05-25 14:32:37] drwx------. 4 boinc boinc      4096 May 25 12:54 pilot3
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc 194874991 May 25 14:31 HITS.44871837._019896.pool.root.1
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc       529 May 25 14:32 boinc_task_state.xml
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc      1019 May 25 14:32 memory_monitor_summary.json
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc    299071 May 25 14:32 log.44871837._019896.job.log.tgz.1
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc      7670 May 25 14:32 heartbeat.json
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc        95 May 25 14:32 pilot_heartbeat.json
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc        27 May 25 14:32 wrapper_checkpoint.txt
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc      8192 May 25 14:32 boinc_mmap_file
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc      4353 May 25 14:32 pilotlog.txt
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc    560603 May 25 14:32 log.44871837._019896.job.log.1
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc       357 May 25 14:32 output.list
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc       620 May 25 14:32 runtime_log
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc    880640 May 25 14:32 result.tar.gz
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc       641 May 25 14:32 UCcNDmfQ6c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOtRKDmEni7jn.diag
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc      8617 May 25 14:32 runtime_log.err
[2025-05-25 14:32:37] -rw-r--r--. 1 boinc boinc     20923 May 25 14:32 stderr.txt
[2025-05-25 14:32:37] HITS file was successfully produced:
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc 194874991 May 25 14:31 shared/HITS.pool.root.1
[2025-05-25 14:32:37]  *** Contents of shared directory: ***
[2025-05-25 14:32:37] total 413892
[2025-05-25 14:32:37] -rw-r--r--. 2 boinc boinc 227540459 May 25 12:54 ATLAS.root_0
[2025-05-25 14:32:37] -rw-r--r--. 2 boinc boinc     15093 May 25 12:54 start_atlas.sh
[2025-05-25 14:32:37] -rw-r--r--. 2 boinc boinc    508869 May 25 12:54 input.tar.gz
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc 194874991 May 25 14:31 HITS.pool.root.1
[2025-05-25 14:32:37] -rw-------. 1 boinc boinc    880640 May 25 14:32 result.tar.gz
14:32:38 (1731920): run_atlas exited; CPU time 30576.934325
14:32:38 (1731920): called boinc_finish(0)

</stderr_txt>
]]>

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