Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:00:33 (36301): wrapper (7.7.26015): starting
17:00:33 (36301): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 17:00:33] Arguments: --nthreads 8
[2025-05-24 17:00:33] Threads: 8
[2025-05-24 17:00:33] Checking for CVMFS
[2025-05-24 17:00:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 17:00:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 17:00:33] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 17:00:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 17:00:34] 2.11.2.0 5203 14645 170344 146378 1 577 17963828 18432000 23974 130560 0 46903721 99.465 53435012 47311 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 17:00:34] CVMFS is ok
[2025-05-24 17:00:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 17:00:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 17:00:34] Further information can be found at the LHC@home message board.
[2025-05-24 17:00:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 17:00:34] Checking for apptainer binary...
[2025-05-24 17:00:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 17:00:34] Running /usr/bin/apptainer --version
[2025-05-24 17:00:34] apptainer version 1.3.2-1.el7
[2025-05-24 17:00:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 17:00:37] c-212-6.aglt2.org
[2025-05-24 17:00:37] apptainer works
[2025-05-24 17:00:37] Set ATHENA_PROC_NUMBER=8
[2025-05-24 17:00:37] Set ATHENA_CORE_NUMBER=8
[2025-05-24 17:00:37] Starting ATLAS job with PandaID=6665631565
[2025-05-24 17:00:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 22:34:13]  *** The last 200 lines of the pilot log: ***
[2025-05-24 22:34:13] 2025-05-25 02:33:51,796 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 22:34:13] 2025-05-25 02:33:51,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 22:34:13] 2025-05-25 02:33:51,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 22:34:13] 2025-05-25 02:33:51,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 22:34:13] 2025-05-25 02:33:51,800 | INFO     | fitting pss+swap vs Time
[2025-05-24 22:34:13] 2025-05-25 02:33:51,801 | INFO     | sum of square deviations: 10644550681.556955
[2025-05-24 22:34:13] 2025-05-25 02:33:51,803 | INFO     | sum of deviations: 63246232244.233894
[2025-05-24 22:34:13] 2025-05-25 02:33:51,803 | INFO     | mean x: 1748130503.116923
[2025-05-24 22:34:13] 2025-05-25 02:33:51,803 | INFO     | mean y: 2461496.993846154
[2025-05-24 22:34:13] 2025-05-25 02:33:51,803 | INFO     | -- intersect: -10384324296.128103
[2025-05-24 22:34:13] 2025-05-25 02:33:51,803 | INFO     | intersect: -10384324296.128103
[2025-05-24 22:34:13] 2025-05-25 02:33:51,804 | INFO     | chi2: 2.5225582397063464
[2025-05-24 22:34:13] 2025-05-25 02:33:51,804 | INFO     | sum of square deviations: 10160795061.487486
[2025-05-24 22:34:13] 2025-05-25 02:33:51,806 | INFO     | sum of deviations: 84196394927.59378
[2025-05-24 22:34:13] 2025-05-25 02:33:51,806 | INFO     | mean x: 1748130350.61875
[2025-05-24 22:34:13] 2025-05-25 02:33:51,806 | INFO     | mean y: 2468013.734375
[2025-05-24 22:34:13] 2025-05-25 02:33:51,807 | INFO     | -- intersect: -14483236352.402304
[2025-05-24 22:34:13] 2025-05-25 02:33:51,807 | INFO     | intersect: -14483236352.402304
[2025-05-24 22:34:13] 2025-05-25 02:33:51,807 | INFO     | chi2: 1.6903986705219805
[2025-05-24 22:34:13] 2025-05-25 02:33:51,807 | INFO     | current chi2=1.6903986705219805 (change=32.9887158237123 %)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,807 | INFO     | sum of square deviations: 9691923441.415922
[2025-05-24 22:34:13] 2025-05-25 02:33:51,809 | INFO     | sum of deviations: 82610705345.29202
[2025-05-24 22:34:13] 2025-05-25 02:33:51,809 | INFO     | mean x: 1748130198.120635
[2025-05-24 22:34:13] 2025-05-25 02:33:51,809 | INFO     | mean y: 2467497.9396825396
[2025-05-24 22:34:13] 2025-05-25 02:33:51,810 | INFO     | -- intersect: -14898008096.515985
[2025-05-24 22:34:13] 2025-05-25 02:33:51,810 | INFO     | intersect: -14898008096.515985
[2025-05-24 22:34:13] 2025-05-25 02:33:51,810 | INFO     | chi2: 1.6903824639004499
[2025-05-24 22:34:13] 2025-05-25 02:33:51,810 | INFO     | current chi2=1.6903824639004499 (change=0.0009587455204022007 %)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,810 | INFO     | right removable region: 314
[2025-05-24 22:34:13] 2025-05-25 02:33:51,810 | INFO     | sum of square deviations: 10160771881.487486
[2025-05-24 22:34:13] 2025-05-25 02:33:51,812 | INFO     | sum of deviations: 4904879896.456268
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | mean x: 1748130655.61875
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | mean y: 2479791.790625
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | -- intersect: -841390241.8182861
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | intersect: -841390241.8182861
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | chi2: 0.8917974704065565
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | current chi2=0.8917974704065565 (change=64.64710085304624 %)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,813 | INFO     | sum of square deviations: 9691877081.415922
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | sum of deviations: -4740239377.615873
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | mean x: 1748130808.120635
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | mean y: 2482912.2793650795
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | -- intersect: 857483282.6169425
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | intersect: 857483282.6169425
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | chi2: 0.8489833064968664
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | current chi2=0.8489833064968664 (change=4.8008842063850965 %)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,816 | INFO     | left removable region: 20
[2025-05-24 22:34:13] 2025-05-25 02:33:51,817 | INFO     | sum of square deviations: 7879873452.843532
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | sum of deviations: 13230634859.231297
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | mean x: 1748130777.6258504
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | mean y: 2490802.074829932
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | -- intersect: -2932693391.347134
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | intersect: -2932693391.347134
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | chi2: 0.0010624611791572927
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | -- intersect: -2932693391.347134
[2025-05-24 22:34:13] 2025-05-25 02:33:51,819 | INFO     | current memory leak: 1.68 B/s (using 294 data points, chi2=0.00)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | ..............................
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . Timing measurements:
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . get job = 0 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . initial setup = 4 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . payload setup = 23 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . stage-in = 0 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . payload execution = 19808 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . stage-out = 2 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | . log creation = 0 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,820 | INFO     | ..............................
[2025-05-24 22:34:13] 2025-05-25 02:33:51,896 | INFO     | 
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | job summary report
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | --------------------------------------------------
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | PanDA job id: 6665631565
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | task id: 44871837
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | errors: (none)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | pilot state: finished 
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | transexitcode: 0
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | exeerrorcode: 0
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | exeerrordiag: 
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | exitcode: 0
[2025-05-24 22:34:13] 2025-05-25 02:33:51,897 | INFO     | exitmsg: OK
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | cpuconsumptiontime: 47094 s
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | nevents: 400
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | neventsw: 0
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | pid: 57469
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | pgrp: 57469
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | corecount: 8
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | event service: False
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | sizes: {0: 2393733, 11: 2393733, 22: 2393761, 25: 2393995, 32: 2394023, 19836: 2427104, 19837: 2427231, 19839: 2436228, 19842: 2436284, 19861: 2436454}
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | --------------------------------------------------
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | 
[2025-05-24 22:34:13] 2025-05-25 02:33:51,898 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 22:34:13] 2025-05-25 02:33:51,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,917 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 22:34:13] 2025-05-25 02:33:51,919 | INFO     | job 6665631565 has completed (purged errors)
[2025-05-24 22:34:13] 2025-05-25 02:33:51,919 | INFO     | overall cleanup function is called
[2025-05-24 22:34:13] 2025-05-25 02:33:52,927 | INFO     | --- collectZombieJob: --- 10, [57469]
[2025-05-24 22:34:13] 2025-05-25 02:33:52,927 | INFO     | zombie collector waiting for pid 57469
[2025-05-24 22:34:13] 2025-05-25 02:33:52,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 22:34:13] 2025-05-25 02:33:52,927 | INFO     | collected zombie processes
[2025-05-24 22:34:13] 2025-05-25 02:33:52,927 | INFO     | will attempt to kill all subprocesses of pid=57469
[2025-05-24 22:34:13] 2025-05-25 02:33:53,683 | INFO     | process IDs to be killed: [57469] (in reverse order)
[2025-05-24 22:34:13] 2025-05-25 02:33:54,216 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 22:34:13] 2025-05-25 02:33:54,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 22:34:13] 2025-05-25 02:33:54,225 | INFO     | did not find any defunct processes belonging to 57469
[2025-05-24 22:34:13] 2025-05-25 02:33:54,247 | INFO     | did not find any defunct processes belonging to 57469
[2025-05-24 22:34:13] 2025-05-25 02:33:54,248 | INFO     | ready for new job
[2025-05-24 22:34:13] 2025-05-25 02:33:54,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 22:34:13] 2025-05-25 02:33:54,250 | INFO     | **************************************
[2025-05-24 22:34:13] 2025-05-25 02:33:54,250 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 22:34:13] 2025-05-25 02:33:54,250 | INFO     | **************************************
[2025-05-24 22:34:13] 2025-05-25 02:33:54,250 | INFO     | 
[2025-05-24 22:34:13] 2025-05-25 02:33:54,256 | INFO     | architecture information:
[2025-05-24 22:34:13] 2025-05-25 02:33:54,277 | INFO     | executing command: cat /etc/os-release
[2025-05-24 22:34:13] 2025-05-25 02:33:54,413 | INFO     | cat /etc/os-release:
[2025-05-24 22:34:13] NAME="CentOS Linux"
[2025-05-24 22:34:13] VERSION="7 (Core)"
[2025-05-24 22:34:13] ID="centos"
[2025-05-24 22:34:13] ID_LIKE="rhel fedora"
[2025-05-24 22:34:13] VERSION_ID="7"
[2025-05-24 22:34:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 22:34:13] ANSI_COLOR="0;31"
[2025-05-24 22:34:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 22:34:13] HOME_URL="https://www.centos.org/"
[2025-05-24 22:34:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 22:34:13] 
[2025-05-24 22:34:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 22:34:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 22:34:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 22:34:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 22:34:13] 
[2025-05-24 22:34:13] 2025-05-25 02:33:54,414 | INFO     | **************************************
[2025-05-24 22:34:13] 2025-05-25 02:33:54,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 22:34:13] 2025-05-25 02:33:54,964 | INFO     | sufficient remaining disk space (103309901824 B)
[2025-05-24 22:34:13] 2025-05-25 02:33:54,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 22:34:13] 2025-05-25 02:33:54,965 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 22:34:13] 2025-05-25 02:33:54,965 | INFO     | update_server=False
[2025-05-24 22:34:13] 2025-05-25 02:33:54,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 22:34:13] 2025-05-25 02:33:55,591 | INFO     | all data control threads have been joined
[2025-05-24 22:34:13] 2025-05-25 02:33:55,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 22:34:13] 2025-05-25 02:33:55,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 22:34:13] 2025-05-25 02:33:55,816 | INFO     | aborting loop
[2025-05-24 22:34:13] 2025-05-25 02:33:55,985 | INFO     | all payload control threads have been joined
[2025-05-24 22:34:13] 2025-05-25 02:33:55,985 | INFO     | [job] retrieve thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,051 | INFO     | [data] copytool_in thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,207 | INFO     | PID=41557 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-24 22:34:13] 2025-05-25 02:33:56,207 | INFO     | .. there are 18 such processes running
[2025-05-24 22:34:13] 2025-05-25 02:33:56,207 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 22:34:13] 2025-05-25 02:33:56,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 22:34:13] 2025-05-25 02:33:56,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 22:34:13] 2025-05-25 02:33:56,426 | INFO     | [job] validate thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,542 | INFO     | all job control threads have been joined
[2025-05-24 22:34:13] 2025-05-25 02:33:56,589 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,597 | INFO     | [data] control thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 22:34:13] 2025-05-25 02:33:56,726 | INFO     | [payload] failed_post thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,822 | INFO     | [job] job monitor thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 22:34:13] 2025-05-25 02:33:56,920 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:56,991 | INFO     | [payload] control thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:57,430 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:57,530 | INFO     | [payload] validate_post thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:57,552 | INFO     | [job] control thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:57,728 | INFO     | [data] copytool_out thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:33:57,922 | INFO     | [job] queue monitor thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:34:00,659 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:34:05,413 | INFO     | job.realtimelogging is not enabled
[2025-05-24 22:34:13] 2025-05-25 02:34:06,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 22:34:13] 2025-05-25 02:34:06,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140360109156160)>', '<ExcThread(monitor, started 140359514445568)>']
[2025-05-24 22:34:13] 2025-05-25 02:34:07,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 22:34:13] 2025-05-25 02:34:07,275 | INFO     | [monitor] control thread has ended
[2025-05-24 22:34:13] 2025-05-25 02:34:11,828 | INFO     | all workflow threads have been joined
[2025-05-24 22:34:13] 2025-05-25 02:34:11,828 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 22:34:13] 2025-05-25 02:34:11,828 | INFO     | traces error code: 0
[2025-05-24 22:34:13] 2025-05-25 02:34:11,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 22:34:13] 2025-05-25 02:34:12,230 [wrapper] ==== pilot stdout END ====
[2025-05-24 22:34:13] 2025-05-25 02:34:12,237 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 22:34:13] 2025-05-25 02:34:12,261 [wrapper] pilotpid: 41557
[2025-05-24 22:34:13] 2025-05-25 02:34:12,276 [wrapper] Pilot exit status: 0
[2025-05-24 22:34:13] 2025-05-25 02:34:12,401 [wrapper] pandaids: 6665631565
[2025-05-24 22:34:13] 2025-05-25 02:34:12,812 [wrapper] cleanup supervisor_pilot 21361 41558
[2025-05-24 22:34:13] 2025-05-25 02:34:12,840 [wrapper] Test setup, not cleaning
[2025-05-24 22:34:13] 2025-05-25 02:34:12,866 [wrapper] apfmon messages muted
[2025-05-24 22:34:13] 2025-05-25 02:34:12,873 [wrapper] ==== wrapper stdout END ====
[2025-05-24 22:34:13] 2025-05-25 02:34:12,876 [wrapper] ==== wrapper stderr END ====
[2025-05-24 22:34:13]  *** Error codes and diagnostics ***
[2025-05-24 22:34:13]     "exeErrorCode": 0,
[2025-05-24 22:34:13]     "exeErrorDiag": "",
[2025-05-24 22:34:13]     "pilotErrorCode": 0,
[2025-05-24 22:34:13]     "pilotErrorDiag": "",
[2025-05-24 22:34:13]  *** Listing of results directory ***
[2025-05-24 22:34:13] total 419740
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas    495897 May 24 11:22 pilot3.tar.gz
[2025-05-24 22:34:13] -rwx------ 1 boincer umatlas     37140 May 24 11:22 runpilot2-wrapper.sh
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas      5111 May 24 11:22 queuedata.json
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas       100 May 24 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 22:34:13] -rwxr-xr-x 1 boincer umatlas      7986 May 24 17:00 run_atlas
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas       105 May 24 17:00 job.xml
[2025-05-24 22:34:13] -rw-r--r-- 2 boincer umatlas 223634838 May 24 17:00 EVNT.44871834._000783.pool.root.1
[2025-05-24 22:34:13] -rw-r--r-- 2 boincer umatlas     15093 May 24 17:00 start_atlas.sh
[2025-05-24 22:34:13] drwxrwx--x 2 boincer umatlas      4096 May 24 17:00 shared
[2025-05-24 22:34:13] -rw-r--r-- 2 boincer umatlas    508875 May 24 17:00 input.tar.gz
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas         0 May 24 17:00 boinc_lockfile
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas      2555 May 24 17:00 pandaJob.out
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas    990811 May 24 17:01 agis_schedconf.cvmfs.json
[2025-05-24 22:34:13] drwx------ 4 boincer umatlas      4096 May 24 17:01 pilot3
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas      6301 May 24 22:27 init_data.xml
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas 198126905 May 24 22:32 HITS.44871837._019622.pool.root.1
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas       531 May 24 22:33 boinc_task_state.xml
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas      1079 May 24 22:33 memory_monitor_summary.json
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas   1596740 May 24 22:33 agis_ddmendpoints.agis.ALL.json
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas    431594 May 24 22:33 log.44871837._019622.job.log.tgz.1
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas        95 May 24 22:33 pilot_heartbeat.json
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas      7743 May 24 22:33 heartbeat.json
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas        28 May 24 22:34 wrapper_checkpoint.txt
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas      8192 May 24 22:34 boinc_mmap_file
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas      4819 May 24 22:34 pilotlog.txt
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas   1683011 May 24 22:34 log.44871837._019622.job.log.1
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas       357 May 24 22:34 output.list
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas       620 May 24 22:34 runtime_log
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas   2129920 May 24 22:34 result.tar.gz
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas      8655 May 24 22:34 runtime_log.err
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas       662 May 24 22:34 H5FODmus5c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaxMKDm86qs0n.diag
[2025-05-24 22:34:13] -rw-r--r-- 1 boincer umatlas     20958 May 24 22:34 stderr.txt
[2025-05-24 22:34:13] HITS file was successfully produced:
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas 198126905 May 24 22:32 shared/HITS.pool.root.1
[2025-05-24 22:34:13]  *** Contents of shared directory: ***
[2025-05-24 22:34:13] total 414480
[2025-05-24 22:34:13] -rw-r--r-- 2 boincer umatlas 223634838 May 24 17:00 ATLAS.root_0
[2025-05-24 22:34:13] -rw-r--r-- 2 boincer umatlas     15093 May 24 17:00 start_atlas.sh
[2025-05-24 22:34:13] -rw-r--r-- 2 boincer umatlas    508875 May 24 17:00 input.tar.gz
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas 198126905 May 24 22:32 HITS.pool.root.1
[2025-05-24 22:34:13] -rw------- 1 boincer umatlas   2129920 May 24 22:34 result.tar.gz
22:34:14 (36301): run_atlas exited; CPU time 46607.169322
22:34:14 (36301): called boinc_finish(0)

</stderr_txt>
]]>

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