Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:20 (87445): wrapper (7.7.26015): starting
17:04:20 (87445): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 17:04:20] Arguments: --nthreads 8
[2025-05-24 17:04:20] Threads: 8
[2025-05-24 17:04:20] Checking for CVMFS
[2025-05-24 17:04:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 17:04:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 17:04:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 17:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 17:04:21] 2.11.2.0 5203 14649 173756 146378 1 577 17963999 18432001 20943 130560 0 47064593 99.466 53435066 47287 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 17:04:21] CVMFS is ok
[2025-05-24 17:04:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 17:04:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 17:04:21] Further information can be found at the LHC@home message board.
[2025-05-24 17:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 17:04:21] Checking for apptainer binary...
[2025-05-24 17:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 17:04:21] Running /usr/bin/apptainer --version
[2025-05-24 17:04:21] apptainer version 1.3.2-1.el7
[2025-05-24 17:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 17:04:23] c-212-6.aglt2.org
[2025-05-24 17:04:23] apptainer works
[2025-05-24 17:04:23] Set ATHENA_PROC_NUMBER=8
[2025-05-24 17:04:23] Set ATHENA_CORE_NUMBER=8
[2025-05-24 17:04:23] Starting ATLAS job with PandaID=6665631779
[2025-05-24 17:04:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 22:24:06]  *** The last 200 lines of the pilot log: ***
[2025-05-24 22:24:06] 2025-05-25 02:23:50,905 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 22:24:06] 2025-05-25 02:23:50,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 22:24:06] 2025-05-25 02:23:50,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 22:24:06] 2025-05-25 02:23:50,905 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 22:24:06] 2025-05-25 02:23:50,909 | INFO     | fitting pss+swap vs Time
[2025-05-24 22:24:06] 2025-05-25 02:23:50,909 | INFO     | sum of square deviations: 9060072690.79225
[2025-05-24 22:24:06] 2025-05-25 02:23:50,912 | INFO     | sum of deviations: 174776977834.56488
[2025-05-24 22:24:06] 2025-05-25 02:23:50,912 | INFO     | mean x: 1748130365.616883
[2025-05-24 22:24:06] 2025-05-25 02:23:50,912 | INFO     | mean y: 2418494.775974026
[2025-05-24 22:24:06] 2025-05-25 02:23:50,912 | INFO     | -- intersect: -33720593736.005
[2025-05-24 22:24:06] 2025-05-25 02:23:50,912 | INFO     | intersect: -33720593736.005
[2025-05-24 22:24:06] 2025-05-25 02:23:50,913 | INFO     | chi2: 7.09275335435035
[2025-05-24 22:24:06] 2025-05-25 02:23:50,913 | INFO     | sum of square deviations: 8625973205.72274
[2025-05-24 22:24:06] 2025-05-25 02:23:50,915 | INFO     | sum of deviations: 191837672238.30695
[2025-05-24 22:24:06] 2025-05-25 02:23:50,915 | INFO     | mean x: 1748130213.1188118
[2025-05-24 22:24:06] 2025-05-25 02:23:50,915 | INFO     | mean y: 2424394.297029703
[2025-05-24 22:24:06] 2025-05-25 02:23:50,915 | INFO     | -- intersect: -38875186613.314476
[2025-05-24 22:24:06] 2025-05-25 02:23:50,915 | INFO     | intersect: -38875186613.314476
[2025-05-24 22:24:06] 2025-05-25 02:23:50,915 | INFO     | chi2: 6.35730152606831
[2025-05-24 22:24:06] 2025-05-25 02:23:50,916 | INFO     | current chi2=6.35730152606831 (change=10.369059680200909 %)
[2025-05-24 22:24:06] 2025-05-25 02:23:50,916 | INFO     | right removable region: 302
[2025-05-24 22:24:06] 2025-05-25 02:23:50,916 | INFO     | sum of square deviations: 8625951245.72274
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | sum of deviations: 69755151471.89117
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | mean x: 1748130518.1188118
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | mean y: 2455367.808580858
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | -- intersect: -14134085126.1432
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | intersect: -14134085126.1432
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | chi2: 2.467208584566124
[2025-05-24 22:24:06] 2025-05-25 02:23:50,918 | INFO     | current chi2=2.467208584566124 (change=65.21507993714658 %)
[2025-05-24 22:24:06] 2025-05-25 02:23:50,919 | INFO     | sum of square deviations: 8205923088.151005
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | sum of deviations: 10950398862.577179
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | mean x: 1748130670.6208053
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | mean y: 2476658.2617449663
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | -- intersect: -2330317337.1930275
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | intersect: -2330317337.1930275
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | chi2: 0.9853417363844922
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | current chi2=0.9853417363844922 (change=60.06248751936102 %)
[2025-05-24 22:24:06] 2025-05-25 02:23:50,921 | INFO     | sum of square deviations: 7799755655.57679
[2025-05-24 22:24:06] 2025-05-25 02:23:50,923 | INFO     | sum of deviations: -9592039355.020477
[2025-05-24 22:24:06] 2025-05-25 02:23:50,923 | INFO     | mean x: 1748130823.1228669
[2025-05-24 22:24:06] 2025-05-25 02:23:50,923 | INFO     | mean y: 2484353.167235495
[2025-05-24 22:24:06] 2025-05-25 02:23:50,923 | INFO     | -- intersect: 2152313193.142464
[2025-05-24 22:24:06] 2025-05-25 02:23:50,924 | INFO     | intersect: 2152313193.142464
[2025-05-24 22:24:06] 2025-05-25 02:23:50,924 | INFO     | chi2: 0.8130398011436015
[2025-05-24 22:24:06] 2025-05-25 02:23:50,924 | INFO     | current chi2=0.8130398011436015 (change=17.486515477677518 %)
[2025-05-24 22:24:06] 2025-05-25 02:23:50,924 | INFO     | left removable region: 30
[2025-05-24 22:24:06] 2025-05-25 02:23:50,924 | INFO     | sum of square deviations: 6239989437.235255
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | sum of deviations: 4509058869.367647
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | mean x: 1748131097.6323528
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | mean y: 2493682.5036764704
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | -- intersect: -1260717755.573536
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | intersect: -1260717755.573536
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | chi2: 0.006100518387981678
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | -- intersect: -1260717755.573536
[2025-05-24 22:24:06] 2025-05-25 02:23:50,926 | INFO     | current memory leak: 0.72 B/s (using 272 data points, chi2=0.01)
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | ..............................
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . Timing measurements:
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . get job = 0 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . initial setup = 4 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . payload setup = 121 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . stage-in = 0 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . payload execution = 18838 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . stage-out = 4 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,927 | INFO     | . log creation = 1 s
[2025-05-24 22:24:06] 2025-05-25 02:23:50,928 | INFO     | ..............................
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | 
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | job summary report
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | --------------------------------------------------
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | PanDA job id: 6665631779
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | task id: 44871837
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | errors: (none)
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 22:24:06] 2025-05-25 02:23:51,279 | INFO     | pilot state: finished 
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | transexitcode: 0
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | exeerrorcode: 0
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | exeerrordiag: 
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | exitcode: 0
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | exitmsg: OK
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | cpuconsumptiontime: 44237 s
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | nevents: 400
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | neventsw: 0
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | pid: 17737
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | pgrp: 17737
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | corecount: 8
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | event service: False
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | sizes: {0: 2393512, 1: 2393767, 2: 2393767, 12: 2393795, 23: 2393823, 27: 2394057, 34: 2394213, 18964: 2426933, 18965: 2426932, 18971: 2435985, 19028: 2436099}
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | --------------------------------------------------
[2025-05-24 22:24:06] 2025-05-25 02:23:51,280 | INFO     | 
[2025-05-24 22:24:06] 2025-05-25 02:23:51,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-24 22:24:06] 2025-05-25 02:23:51,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 22:24:06] 2025-05-25 02:23:51,318 | INFO     | job 6665631779 has completed (purged errors)
[2025-05-24 22:24:06] 2025-05-25 02:23:51,318 | INFO     | overall cleanup function is called
[2025-05-24 22:24:06] 2025-05-25 02:23:52,328 | INFO     | --- collectZombieJob: --- 10, [17737]
[2025-05-24 22:24:06] 2025-05-25 02:23:52,328 | INFO     | zombie collector waiting for pid 17737
[2025-05-24 22:24:06] 2025-05-25 02:23:52,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 22:24:06] 2025-05-25 02:23:52,328 | INFO     | collected zombie processes
[2025-05-24 22:24:06] 2025-05-25 02:23:52,328 | INFO     | will attempt to kill all subprocesses of pid=17737
[2025-05-24 22:24:06] 2025-05-25 02:23:53,312 | INFO     | process IDs to be killed: [17737] (in reverse order)
[2025-05-24 22:24:06] 2025-05-25 02:23:53,885 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 22:24:06] 2025-05-25 02:23:53,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 22:24:06] 2025-05-25 02:23:53,944 | INFO     | did not find any defunct processes belonging to 17737
[2025-05-24 22:24:06] 2025-05-25 02:23:53,978 | INFO     | did not find any defunct processes belonging to 17737
[2025-05-24 22:24:06] 2025-05-25 02:23:53,978 | INFO     | ready for new job
[2025-05-24 22:24:06] 2025-05-25 02:23:53,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 22:24:06] 2025-05-25 02:23:53,980 | INFO     | **************************************
[2025-05-24 22:24:06] 2025-05-25 02:23:53,980 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 22:24:06] 2025-05-25 02:23:53,990 | INFO     | **************************************
[2025-05-24 22:24:06] 2025-05-25 02:23:53,990 | INFO     | 
[2025-05-24 22:24:06] 2025-05-25 02:23:54,011 | INFO     | architecture information:
[2025-05-24 22:24:06] 2025-05-25 02:23:54,014 | INFO     | executing command: cat /etc/os-release
[2025-05-24 22:24:06] 2025-05-25 02:23:54,149 | INFO     | cat /etc/os-release:
[2025-05-24 22:24:06] NAME="CentOS Linux"
[2025-05-24 22:24:06] VERSION="7 (Core)"
[2025-05-24 22:24:06] ID="centos"
[2025-05-24 22:24:06] ID_LIKE="rhel fedora"
[2025-05-24 22:24:06] VERSION_ID="7"
[2025-05-24 22:24:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 22:24:06] ANSI_COLOR="0;31"
[2025-05-24 22:24:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 22:24:06] HOME_URL="https://www.centos.org/"
[2025-05-24 22:24:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 22:24:06] 
[2025-05-24 22:24:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 22:24:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 22:24:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 22:24:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 22:24:06] 
[2025-05-24 22:24:06] 2025-05-25 02:23:54,150 | INFO     | **************************************
[2025-05-24 22:24:06] 2025-05-25 02:23:54,653 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-24 22:24:06] 2025-05-25 02:23:54,749 | INFO     | sufficient remaining disk space (103387496448 B)
[2025-05-24 22:24:06] 2025-05-25 02:23:54,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 22:24:06] 2025-05-25 02:23:54,749 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 22:24:06] 2025-05-25 02:23:54,749 | INFO     | update_server=False
[2025-05-24 22:24:06] 2025-05-25 02:23:54,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 22:24:06] 2025-05-25 02:23:54,749 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 22:24:06] 2025-05-25 02:23:54,750 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 22:24:06] 2025-05-25 02:23:54,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 22:24:06] 2025-05-25 02:23:54,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 22:24:06] 2025-05-25 02:23:54,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 22:24:06] 2025-05-25 02:23:54,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 22:24:06] 2025-05-25 02:23:54,802 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 22:24:06] 2025-05-25 02:23:54,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 22:24:06] 2025-05-25 02:23:54,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 22:24:06] 2025-05-25 02:23:54,802 | INFO     | will abort loop
[2025-05-24 22:24:06] 2025-05-25 02:23:55,061 | INFO     | all data control threads have been joined
[2025-05-24 22:24:06] 2025-05-25 02:23:55,270 | INFO     | all payload control threads have been joined
[2025-05-24 22:24:06] 2025-05-25 02:23:55,760 | INFO     | [job] retrieve thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:55,771 | INFO     | all job control threads have been joined
[2025-05-24 22:24:06] 2025-05-25 02:23:55,808 | INFO     | [job] job monitor thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:55,921 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:55,999 | INFO     | [payload] validate_post thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 22:24:06] 2025-05-25 02:23:56,081 | INFO     | [data] control thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,276 | INFO     | [payload] control thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,289 | INFO     | [job] validate thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,325 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,642 | INFO     | [data] copytool_in thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,642 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,764 | INFO     | [data] copytool_out thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,778 | INFO     | [job] control thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:56,848 | INFO     | [payload] failed_post thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:57,050 | INFO     | [job] queue monitor thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:58,768 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 22:24:06] 2025-05-25 02:23:59,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719058462528)>', '<ExcThread(monitor, started 139718608008960)>']
[2025-05-24 22:24:06] 2025-05-25 02:23:59,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 22:24:06] 2025-05-25 02:23:59,784 | INFO     | [monitor] control thread has ended
[2025-05-24 22:24:06] 2025-05-25 02:24:04,437 | INFO     | all workflow threads have been joined
[2025-05-24 22:24:06] 2025-05-25 02:24:04,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 22:24:06] 2025-05-25 02:24:04,437 | INFO     | traces error code: 0
[2025-05-24 22:24:06] 2025-05-25 02:24:04,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 22:24:06] 2025-05-25 02:24:04,610 [wrapper] ==== pilot stdout END ====
[2025-05-24 22:24:06] 2025-05-25 02:24:04,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 22:24:06] 2025-05-25 02:24:04,617 [wrapper] pilotpid: 1734
[2025-05-24 22:24:06] 2025-05-25 02:24:04,619 [wrapper] Pilot exit status: 0
[2025-05-24 22:24:06] 2025-05-25 02:24:04,690 [wrapper] pandaids: 6665631779
[2025-05-24 22:24:06] 2025-05-25 02:24:05,156 [wrapper] cleanup supervisor_pilot 10682 1735
[2025-05-24 22:24:06] 2025-05-25 02:24:05,198 [wrapper] Test setup, not cleaning
[2025-05-24 22:24:06] 2025-05-25 02:24:05,239 [wrapper] apfmon messages muted
[2025-05-24 22:24:06] 2025-05-25 02:24:05,259 [wrapper] ==== wrapper stdout END ====
[2025-05-24 22:24:06] 2025-05-25 02:24:05,266 [wrapper] ==== wrapper stderr END ====
[2025-05-24 22:24:06]  *** Error codes and diagnostics ***
[2025-05-24 22:24:06]     "exeErrorCode": 0,
[2025-05-24 22:24:06]     "exeErrorDiag": "",
[2025-05-24 22:24:06]     "pilotErrorCode": 0,
[2025-05-24 22:24:06]     "pilotErrorDiag": "",
[2025-05-24 22:24:06]  *** Listing of results directory ***
[2025-05-24 22:24:06] total 415864
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas      5111 May 24 11:43 queuedata.json
[2025-05-24 22:24:06] -rwx------ 1 boincer umatlas     37140 May 24 11:44 runpilot2-wrapper.sh
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas    495897 May 24 11:44 pilot3.tar.gz
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas       100 May 24 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 22:24:06] -rwxr-xr-x 1 boincer umatlas      7986 May 24 17:04 run_atlas
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas       105 May 24 17:04 job.xml
[2025-05-24 22:24:06] -rw-r--r-- 2 boincer umatlas 226488731 May 24 17:04 EVNT.44871834._000791.pool.root.1
[2025-05-24 22:24:06] -rw-r--r-- 2 boincer umatlas     15093 May 24 17:04 start_atlas.sh
[2025-05-24 22:24:06] drwxrwx--x 2 boincer umatlas      4096 May 24 17:04 shared
[2025-05-24 22:24:06] -rw-r--r-- 2 boincer umatlas    508873 May 24 17:04 input.tar.gz
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas         0 May 24 17:04 boinc_lockfile
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas      2558 May 24 17:04 pandaJob.out
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas    990811 May 24 17:05 agis_schedconf.cvmfs.json
[2025-05-24 22:24:06] drwx------ 4 boincer umatlas      4096 May 24 17:05 pilot3
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas      6301 May 24 22:18 init_data.xml
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas 191406669 May 24 22:21 HITS.44871837._019836.pool.root.1
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas       531 May 24 22:21 boinc_task_state.xml
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas      1075 May 24 22:22 memory_monitor_summary.json
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas   1596740 May 24 22:22 agis_ddmendpoints.agis.ALL.json
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas    441677 May 24 22:22 log.44871837._019836.job.log.tgz.1
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas        95 May 24 22:23 pilot_heartbeat.json
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas      7745 May 24 22:23 heartbeat.json
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas      8192 May 24 22:24 boinc_mmap_file
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas        28 May 24 22:24 wrapper_checkpoint.txt
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas      4663 May 24 22:24 pilotlog.txt
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas   1614578 May 24 22:24 log.44871837._019836.job.log.1
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas       357 May 24 22:24 output.list
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas       620 May 24 22:24 runtime_log
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas   2078720 May 24 22:24 result.tar.gz
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas      8655 May 24 22:24 runtime_log.err
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas       662 May 24 22:24 AXoNDmnD6c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8rRKDmU5WAam.diag
[2025-05-24 22:24:06] -rw-r--r-- 1 boincer umatlas     20912 May 24 22:24 stderr.txt
[2025-05-24 22:24:06] HITS file was successfully produced:
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas 191406669 May 24 22:21 shared/HITS.pool.root.1
[2025-05-24 22:24:06]  *** Contents of shared directory: ***
[2025-05-24 22:24:06] total 410660
[2025-05-24 22:24:06] -rw-r--r-- 2 boincer umatlas 226488731 May 24 17:04 ATLAS.root_0
[2025-05-24 22:24:06] -rw-r--r-- 2 boincer umatlas     15093 May 24 17:04 start_atlas.sh
[2025-05-24 22:24:06] -rw-r--r-- 2 boincer umatlas    508873 May 24 17:04 input.tar.gz
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas 191406669 May 24 22:21 HITS.pool.root.1
[2025-05-24 22:24:06] -rw------- 1 boincer umatlas   2078720 May 24 22:24 result.tar.gz
22:24:07 (87445): run_atlas exited; CPU time 43807.620703
22:24:07 (87445): called boinc_finish(0)

</stderr_txt>
]]>

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