Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:19 (1700573): wrapper (7.7.26015): starting
11:37:19 (1700573): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 11:37:19] Arguments: --nthreads 6
[2025-05-25 11:37:19] Threads: 6
[2025-05-25 11:37:19] Checking for CVMFS
[2025-05-25 11:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:37:19] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:37:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:37:20] 2.11.5.0 1050432 1264 71080 146387 0 61 19054071 20971520 929 130560 0 1766671 99.993 314946 92 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 11:37:20] CVMFS is ok
[2025-05-25 11:37:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:37:20] Checking for apptainer binary...
[2025-05-25 11:37:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:37:20] Running /usr/bin/apptainer --version
[2025-05-25 11:37:20] apptainer version 1.3.6-1.el9
[2025-05-25 11:37:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:37:20] testio006
[2025-05-25 11:37:20] apptainer works
[2025-05-25 11:37:20] Set ATHENA_PROC_NUMBER=6
[2025-05-25 11:37:20] Set ATHENA_CORE_NUMBER=6
[2025-05-25 11:37:20] Starting ATLAS job with PandaID=6665381216
[2025-05-25 11:37:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 13:12:12]  *** The last 200 lines of the pilot log: ***
[2025-05-25 13:12:12]  is_altstaged=None
[2025-05-25 13:12:12]  is_tar=False
[2025-05-25 13:12:12]  lfn=log.44871837._016083.job.log.tgz.1
[2025-05-25 13:12:12]  mtime=0
[2025-05-25 13:12:12]  protocol_id=None
[2025-05-25 13:12:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 13:12:12]  replicas=None
[2025-05-25 13:12:12]  scope=mc23_13p6TeV
[2025-05-25 13:12:12]  status=None
[2025-05-25 13:12:12]  status_code=0
[2025-05-25 13:12:12]  storage_token=
[2025-05-25 13:12:12]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6665381216/log.44871837._016083.job.log.tgz.1
[2025-05-25 13:12:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/4f/log.44871837._016083.job.log.tgz.1
[2025-05-25 13:12:12]  workdir=None
[2025-05-25 13:12:12] ]
[2025-05-25 13:12:12] 2025-05-25 04:11:48,358 | INFO     | transferring file log.44871837._016083.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6665381216/log.44871837._016083.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-25 13:12:12] 2025-05-25 04:11:48,358 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6665381216/log.44871837._016083.job.log.tgz.1 /var/lib/boinc/slots/1/log.44871837._016083.job
[2025-05-25 13:12:12] 2025-05-25 04:11:48,371 | INFO     | adding to output.list: log.44871837._016083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/4f/log.44871837._016083.job.log.tg
[2025-05-25 13:12:12] 2025-05-25 04:11:48,371 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 13:12:12] 2025-05-25 04:11:48,371 | INFO     | summary of transferred files:
[2025-05-25 13:12:12] 2025-05-25 04:11:48,371 | INFO     |  -- lfn=log.44871837._016083.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 13:12:12] 2025-05-25 04:11:48,371 | INFO     | stage-out finished correctly
[2025-05-25 13:12:12] 2025-05-25 04:11:50,320 | INFO     | monitor loop #409: job 0:6665381216 is in state 'finished'
[2025-05-25 13:12:12] 2025-05-25 04:11:50,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:12:12] 2025-05-25 04:11:50,860 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 13:12:12] 2025-05-25 04:11:50,918 | INFO     | job 6665381216 has state=finished
[2025-05-25 13:12:12] 2025-05-25 04:11:50,918 | INFO     | preparing for final server update for job 6665381216 in state='finished'
[2025-05-25 13:12:12] 2025-05-25 04:11:50,919 | INFO     | this job has now completed (state=finished)
[2025-05-25 13:12:12] 2025-05-25 04:11:50,919 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 13:12:12] 2025-05-25 04:11:50,919 | INFO     | log transfer has been attempted: DONE
[2025-05-25 13:12:12] 2025-05-25 04:11:50,919 | INFO     | job 6665381216 has finished - writing final server update
[2025-05-25 13:12:12] 2025-05-25 04:11:50,919 | INFO     | total number of processed events: 400 (read)
[2025-05-25 13:12:12] 2025-05-25 04:11:50,920 | INFO     | executing command: lscpu
[2025-05-25 13:12:12] 2025-05-25 04:11:50,942 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 13:12:12] 2025-05-25 04:11:52,823 | INFO     | monitor loop #410: job 0:6665381216 is in state 'finished'
[2025-05-25 13:12:12] 2025-05-25 04:11:52,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:12:12] 2025-05-25 04:11:53,288 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 13:12:12] 2025-05-25 04:11:53,288 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6665381216/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 13:12:12] 2025-05-25 04:11:53,288 | INFO     | extracted standard info from prmon json
[2025-05-25 13:12:12] 2025-05-25 04:11:53,289 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 13:12:12] 2025-05-25 04:11:53,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 13:12:12] 2025-05-25 04:11:53,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 13:12:12] 2025-05-25 04:11:53,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | fitting pss+swap vs Time
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | sum of square deviations: 197194488.75581366
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | sum of deviations: 3329732448.0348845
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | mean x: 1748143566.5930233
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | mean y: 2480511.0581395347
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | -- intersect: -29515841193.744637
[2025-05-25 13:12:12] 2025-05-25 04:11:53,291 | INFO     | intersect: -29515841193.744637
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | chi2: 1.4256254901279657
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | -- intersect: -29515841193.744637
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | current memory leak: 16.89 B/s (using 86 data points, chi2=1.43)
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | ..............................
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | . Timing measurements:
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | . get job = 0 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | . initial setup = 4 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | . payload setup = 3 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,292 | INFO     | . stage-in = 0 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,293 | INFO     | . payload execution = 5638 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,293 | INFO     | . stage-out = 0 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,293 | INFO     | . log creation = 0 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,293 | INFO     | ..............................
[2025-05-25 13:12:12] 2025-05-25 04:11:53,350 | INFO     | 
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | job summary report
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | --------------------------------------------------
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | PanDA job id: 6665381216
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | task id: 44871837
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | errors: (none)
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | pilot state: finished 
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | transexitcode: 0
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | exeerrorcode: 0
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | exeerrordiag: 
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | exitcode: 0
[2025-05-25 13:12:12] 2025-05-25 04:11:53,351 | INFO     | exitmsg: OK
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | cpuconsumptiontime: 29245 s
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | nevents: 400
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | neventsw: 0
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | pid: 1710838
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | pgrp: 1710838
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | corecount: 6
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | event service: False
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | sizes: {0: 2393737, 3: 2393943, 11: 2393971, 5645: 2420446, 5646: 2429470, 5649: 2429470, 5651: 2429768}
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | --------------------------------------------------
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | 
[2025-05-25 13:12:12] 2025-05-25 04:11:53,352 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | job 6665381216 has completed (purged errors)
[2025-05-25 13:12:12] 2025-05-25 04:11:53,366 | INFO     | overall cleanup function is called
[2025-05-25 13:12:12] 2025-05-25 04:11:54,373 | INFO     | --- collectZombieJob: --- 10, [1710838]
[2025-05-25 13:12:12] 2025-05-25 04:11:54,373 | INFO     | zombie collector waiting for pid 1710838
[2025-05-25 13:12:12] 2025-05-25 04:11:54,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 13:12:12] 2025-05-25 04:11:54,373 | INFO     | collected zombie processes
[2025-05-25 13:12:12] 2025-05-25 04:11:54,373 | INFO     | will attempt to kill all subprocesses of pid=1710838
[2025-05-25 13:12:12] 2025-05-25 04:11:54,437 | INFO     | process IDs to be killed: [1710838] (in reverse order)
[2025-05-25 13:12:12] 2025-05-25 04:11:54,465 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 13:12:12] 2025-05-25 04:11:54,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 13:12:12] 2025-05-25 04:11:54,469 | INFO     | did not find any defunct processes belonging to 1710838
[2025-05-25 13:12:12] 2025-05-25 04:11:54,471 | INFO     | did not find any defunct processes belonging to 1710838
[2025-05-25 13:12:12] 2025-05-25 04:11:54,472 | INFO     | ready for new job
[2025-05-25 13:12:12] 2025-05-25 04:11:54,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 13:12:12] 2025-05-25 04:11:54,473 | INFO     | **************************************
[2025-05-25 13:12:12] 2025-05-25 04:11:54,473 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 13:12:12] 2025-05-25 04:11:54,473 | INFO     | **************************************
[2025-05-25 13:12:12] 2025-05-25 04:11:54,473 | INFO     | 
[2025-05-25 13:12:12] 2025-05-25 04:11:54,474 | INFO     | architecture information:
[2025-05-25 13:12:12] 2025-05-25 04:11:54,474 | INFO     | executing command: cat /etc/os-release
[2025-05-25 13:12:12] 2025-05-25 04:11:54,483 | INFO     | cat /etc/os-release:
[2025-05-25 13:12:12] NAME="CentOS Linux"
[2025-05-25 13:12:12] VERSION="7 (Core)"
[2025-05-25 13:12:12] ID="centos"
[2025-05-25 13:12:12] ID_LIKE="rhel fedora"
[2025-05-25 13:12:12] VERSION_ID="7"
[2025-05-25 13:12:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 13:12:12] ANSI_COLOR="0;31"
[2025-05-25 13:12:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 13:12:12] HOME_URL="https://www.centos.org/"
[2025-05-25 13:12:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 13:12:12] 
[2025-05-25 13:12:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 13:12:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 13:12:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 13:12:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 13:12:12] 
[2025-05-25 13:12:12] 2025-05-25 04:11:54,484 | INFO     | **************************************
[2025-05-25 13:12:12] 2025-05-25 04:11:54,986 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-25 13:12:12] 2025-05-25 04:11:54,997 | INFO     | sufficient remaining disk space (77874593792 B)
[2025-05-25 13:12:12] 2025-05-25 04:11:54,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 13:12:12] 2025-05-25 04:11:54,997 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 13:12:12] 2025-05-25 04:11:54,997 | INFO     | update_server=False
[2025-05-25 13:12:12] 2025-05-25 04:11:54,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 13:12:12] 2025-05-25 04:11:54,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:12:12] 2025-05-25 04:11:55,209 | INFO     | all data control threads have been joined
[2025-05-25 13:12:12] 2025-05-25 04:11:55,326 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 13:12:12] 2025-05-25 04:11:55,326 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 13:12:12] 2025-05-25 04:11:55,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:12:12] 2025-05-25 04:11:55,326 | INFO     | will abort loop
[2025-05-25 13:12:12] 2025-05-25 04:11:55,731 | INFO     | all job control threads have been joined
[2025-05-25 13:12:12] 2025-05-25 04:11:56,002 | INFO     | [job] retrieve thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,003 | INFO     | [job] queue monitor thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,073 | INFO     | PID=1704280 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 13:12:12] 2025-05-25 04:11:56,073 | INFO     | .. there are 2 such processes running
[2025-05-25 13:12:12] 2025-05-25 04:11:56,073 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 13:12:12] 2025-05-25 04:11:56,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 13:12:12] 2025-05-25 04:11:56,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 13:12:12] 2025-05-25 04:11:56,133 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,211 | INFO     | [data] control thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,332 | INFO     | [job] job monitor thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,332 | INFO     | all payload control threads have been joined
[2025-05-25 13:12:12] 2025-05-25 04:11:56,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 13:12:12] 2025-05-25 04:11:56,692 | INFO     | [payload] validate_post thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,736 | INFO     | [job] control thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:56,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 13:12:12] 2025-05-25 04:11:56,929 | INFO     | [data] copytool_in thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:57,163 | INFO     | [job] validate thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:57,252 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:57,338 | INFO     | [payload] control thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:57,414 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:57,438 | INFO     | [payload] failed_post thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:11:58,439 | INFO     | [data] copytool_out thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:12:00,928 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:12:05,255 | INFO     | job.realtimelogging is not enabled
[2025-05-25 13:12:12] 2025-05-25 04:12:06,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 13:12:12] 2025-05-25 04:12:06,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995145946944)>', '<ExcThread(monitor, started 139994366723840)>']
[2025-05-25 13:12:12] 2025-05-25 04:12:07,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 13:12:12] 2025-05-25 04:12:07,129 | INFO     | [monitor] control thread has ended
[2025-05-25 13:12:12] 2025-05-25 04:12:11,954 | INFO     | all workflow threads have been joined
[2025-05-25 13:12:12] 2025-05-25 04:12:11,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 13:12:12] 2025-05-25 04:12:11,954 | INFO     | traces error code: 0
[2025-05-25 13:12:12] 2025-05-25 04:12:11,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 13:12:12] 2025-05-25 04:12:12,028 [wrapper] ==== pilot stdout END ====
[2025-05-25 13:12:12] 2025-05-25 04:12:12,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 13:12:12] 2025-05-25 04:12:12,032 [wrapper] pilotpid: 1704280
[2025-05-25 13:12:12] 2025-05-25 04:12:12,033 [wrapper] Pilot exit status: 0
[2025-05-25 13:12:12] 2025-05-25 04:12:12,040 [wrapper] pandaids: 6665381216
[2025-05-25 13:12:12] 2025-05-25 04:12:12,059 [wrapper] cleanup supervisor_pilot 1748785 1704281
[2025-05-25 13:12:12] 2025-05-25 04:12:12,061 [wrapper] Test setup, not cleaning
[2025-05-25 13:12:12] 2025-05-25 04:12:12,063 [wrapper] apfmon messages muted
[2025-05-25 13:12:12] 2025-05-25 04:12:12,065 [wrapper] ==== wrapper stdout END ====
[2025-05-25 13:12:12] 2025-05-25 04:12:12,066 [wrapper] ==== wrapper stderr END ====
[2025-05-25 13:12:12]  *** Error codes and diagnostics ***
[2025-05-25 13:12:12]     "exeErrorCode": 0,
[2025-05-25 13:12:12]     "exeErrorDiag": "",
[2025-05-25 13:12:12]     "pilotErrorCode": 0,
[2025-05-25 13:12:12]     "pilotErrorDiag": "",
[2025-05-25 13:12:12]  *** Listing of results directory ***
[2025-05-25 13:12:12] total 411408
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc    495897 May 24 19:42 pilot3.tar.gz
[2025-05-25 13:12:12] -rwx------. 1 boinc boinc     37140 May 24 20:07 runpilot2-wrapper.sh
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc      5111 May 24 20:07 queuedata.json
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc       100 May 25 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 13:12:12] -rwxr-xr-x. 1 boinc boinc      7986 May 25 11:37 run_atlas
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc       105 May 25 11:37 job.xml
[2025-05-25 13:12:12] -rw-r--r--. 2 boinc boinc     15093 May 25 11:37 start_atlas.sh
[2025-05-25 13:12:12] drwxrwx--x. 2 boinc boinc        68 May 25 11:37 shared
[2025-05-25 13:12:12] -rw-r--r--. 2 boinc boinc    508873 May 25 11:37 input.tar.gz
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc      9464 May 25 11:37 init_data.xml
[2025-05-25 13:12:12] -rw-r--r--. 2 boinc boinc 225501789 May 25 11:37 EVNT.44871834._000644.pool.root.1
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc         0 May 25 11:37 boinc_lockfile
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc      2557 May 25 11:37 pandaJob.out
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc    990803 May 25 11:37 agis_schedconf.cvmfs.json
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc   1596740 May 25 11:37 agis_ddmendpoints.agis.ALL.json
[2025-05-25 13:12:12] drwx------. 4 boinc boinc      4096 May 25 11:37 pilot3
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc        96 May 25 13:11 pilot_heartbeat.json
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc 190333042 May 25 13:11 HITS.44871837._016083.pool.root.1
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc       529 May 25 13:11 boinc_task_state.xml
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc      1019 May 25 13:11 memory_monitor_summary.json
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc    271000 May 25 13:11 log.44871837._016083.job.log.tgz.1
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc      7670 May 25 13:11 heartbeat.json
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc      8192 May 25 13:12 boinc_mmap_file
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc        27 May 25 13:12 wrapper_checkpoint.txt
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc      5005 May 25 13:12 pilotlog.txt
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc    536612 May 25 13:12 log.44871837._016083.job.log.1
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc       357 May 25 13:12 output.list
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc       620 May 25 13:12 runtime_log
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc    829440 May 25 13:12 result.tar.gz
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc      8617 May 25 13:12 runtime_log.err
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc       641 May 25 13:12 j6NKDmit1c7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9cMKDmbYgJfn.diag
[2025-05-25 13:12:12] -rw-r--r--. 1 boinc boinc     21132 May 25 13:12 stderr.txt
[2025-05-25 13:12:12] HITS file was successfully produced:
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc 190333042 May 25 13:11 shared/HITS.pool.root.1
[2025-05-25 13:12:12]  *** Contents of shared directory: ***
[2025-05-25 13:12:12] total 407424
[2025-05-25 13:12:12] -rw-r--r--. 2 boinc boinc     15093 May 25 11:37 start_atlas.sh
[2025-05-25 13:12:12] -rw-r--r--. 2 boinc boinc    508873 May 25 11:37 input.tar.gz
[2025-05-25 13:12:12] -rw-r--r--. 2 boinc boinc 225501789 May 25 11:37 ATLAS.root_0
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc 190333042 May 25 13:11 HITS.pool.root.1
[2025-05-25 13:12:12] -rw-------. 1 boinc boinc    829440 May 25 13:12 result.tar.gz
13:12:13 (1700573): run_atlas exited; CPU time 29291.939214
13:12:13 (1700573): called boinc_finish(0)

</stderr_txt>
]]>

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