Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:41:46 (82203): wrapper (7.7.26015): starting
11:41:46 (82203): wrapper: running run_atlas (--nthreads 5)
[2025-05-25 11:41:46] Arguments: --nthreads 5
[2025-05-25 11:41:46] Threads: 5
[2025-05-25 11:41:46] Checking for CVMFS
[2025-05-25 11:41:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:41:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:41:46] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:41:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:41:46] 2.12.7.0 3760 300 47640 146385 2 56 2673742 4096001 0 130560 0 216230 99.969 147090 6455 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-05-25 11:41:46] CVMFS is ok
[2025-05-25 11:41:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 11:41:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-05-25 11:41:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-05-25 11:41:46] Further information can be found at the LHC@home message board.
[2025-05-25 11:41:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:41:46] Checking for apptainer binary...
[2025-05-25 11:41:46] apptainer is not installed, using version from CVMFS
[2025-05-25 11:41:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:41:47] BoincUbuntu
[2025-05-25 11:41:47] apptainer works
[2025-05-25 11:41:47] Set ATHENA_PROC_NUMBER=5
[2025-05-25 11:41:47] Set ATHENA_CORE_NUMBER=5
[2025-05-25 11:41:47] Starting ATLAS job with PandaID=6665150364
[2025-05-25 11:41:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 13:30:25]  *** The last 200 lines of the pilot log: ***
[2025-05-25 13:30:25] 2025-05-25 03:30:05,959 | INFO     | monitor loop #398: job 0:6665150364 is in state 'finished'
[2025-05-25 13:30:25] 2025-05-25 03:30:05,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:30:25] 2025-05-25 03:30:08,463 | INFO     | monitor loop #399: job 0:6665150364 is in state 'finished'
[2025-05-25 13:30:25] 2025-05-25 03:30:08,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:30:25] 2025-05-25 03:30:10,494 | INFO     | PID=85804 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-25 13:30:25] 2025-05-25 03:30:10,966 | INFO     | monitor loop #400: job 0:6665150364 is in state 'finished'
[2025-05-25 13:30:25] 2025-05-25 03:30:10,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,659 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-25 13:30:25] 2025-05-25 03:30:12,659 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6665150364/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,659 | INFO     | extracted standard info from prmon json
[2025-05-25 13:30:25] 2025-05-25 03:30:12,659 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 13:30:25] 2025-05-25 03:30:12,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 13:30:25] 2025-05-25 03:30:12,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 13:30:25] 2025-05-25 03:30:12,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 13:30:25] 2025-05-25 03:30:12,661 | INFO     | fitting pss+swap vs Time
[2025-05-25 13:30:25] 2025-05-25 03:30:12,661 | INFO     | sum of square deviations: 362633117.7087385
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | sum of deviations: -666929098.4951459
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | mean x: 1748140584.3592234
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | mean y: 2445464.3106796117
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | -- intersect: 3217501583.1119866
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | intersect: 3217501583.1119866
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | chi2: 2.6284952165557898
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | sum of square deviations: 313573792.4081629
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | sum of deviations: -286435865.0816248
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | mean x: 1748140428.5306122
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | mean y: 2446700.1938775512
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | -- intersect: 1599296079.9996796
[2025-05-25 13:30:25] 2025-05-25 03:30:12,662 | INFO     | intersect: 1599296079.9996796
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | chi2: 2.6308693383091803
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | current chi2=2.6308693383091803 (change=-0.09032246809645995 %)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | right removable region: 97
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | sum of square deviations: 312699898.0000002
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | sum of deviations: -23835386323.571438
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | mean x: 1748140741.5714285
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | mean y: 2517611.6530612246
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | -- intersect: 133253632146.16959
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | intersect: 133253632146.16959
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | chi2: 0.21088800071956107
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | current chi2=0.21088800071956107 (change=91.97685430845505 %)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,663 | INFO     | sum of square deviations: 267320083.16128972
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | sum of deviations: -20719608078.290325
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | mean x: 1748140899.2903225
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | mean y: 2506645.6774193547
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | -- intersect: 135498477882.04492
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | intersect: 135498477882.04492
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | chi2: 0.20254789163928616
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | current chi2=0.20254789163928616 (change=3.9547575261835735 %)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | left removable region: 20
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | sum of square deviations: 152404811.94805163
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | sum of deviations: -11042285606.480526
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | mean x: 1748141029.883117
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | mean y: 2474251.1688311687
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | -- intersect: 126661680647.85481
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | intersect: 126661680647.85481
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | chi2: 0.166953411656502
[2025-05-25 13:30:25] 2025-05-25 03:30:12,664 | INFO     | -- intersect: 126661680647.85481
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | current memory leak: -72.45 B/s (using 77 data points, chi2=0.17)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | ..............................
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . Timing measurements:
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . get job = 0 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . initial setup = 5 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . payload setup = 18 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . stage-in = 0 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . payload execution = 6415 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . stage-out = 0 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | . log creation = 0 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,665 | INFO     | ..............................
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | 
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | job summary report
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | --------------------------------------------------
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | PanDA job id: 6665150364
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | task id: 44871837
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | errors: (none)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | pilot state: finished 
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | transexitcode: 0
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | exeerrorcode: 0
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | exeerrordiag: 
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | exitcode: 0
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | exitmsg: OK
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | cpuconsumptiontime: 30003 s
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | nevents: 400
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | neventsw: 0
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | pid: 92239
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | pgrp: 92239
[2025-05-25 13:30:25] 2025-05-25 03:30:12,714 | INFO     | corecount: 5
[2025-05-25 13:30:25] 2025-05-25 03:30:12,715 | INFO     | event service: False
[2025-05-25 13:30:25] 2025-05-25 03:30:12,715 | INFO     | sizes: {0: 2393763, 9: 2393969, 11: 2393997, 6437: 2420940, 6438: 2429881, 6441: 2429937, 6463: 2430235}
[2025-05-25 13:30:25] 2025-05-25 03:30:12,715 | INFO     | --------------------------------------------------
[2025-05-25 13:30:25] 2025-05-25 03:30:12,715 | INFO     | 
[2025-05-25 13:30:25] 2025-05-25 03:30:12,715 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | job 6665150364 has completed (purged errors)
[2025-05-25 13:30:25] 2025-05-25 03:30:12,777 | INFO     | overall cleanup function is called
[2025-05-25 13:30:25] 2025-05-25 03:30:13,781 | INFO     | --- collectZombieJob: --- 10, [92239]
[2025-05-25 13:30:25] 2025-05-25 03:30:13,781 | INFO     | zombie collector waiting for pid 92239
[2025-05-25 13:30:25] 2025-05-25 03:30:13,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 13:30:25] 2025-05-25 03:30:13,781 | INFO     | collected zombie processes
[2025-05-25 13:30:25] 2025-05-25 03:30:13,781 | INFO     | will attempt to kill all subprocesses of pid=92239
[2025-05-25 13:30:25] 2025-05-25 03:30:13,833 | INFO     | process IDs to be killed: [92239] (in reverse order)
[2025-05-25 13:30:25] 2025-05-25 03:30:13,924 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 13:30:25] 2025-05-25 03:30:13,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 13:30:25] 2025-05-25 03:30:13,926 | INFO     | did not find any defunct processes belonging to 92239
[2025-05-25 13:30:25] 2025-05-25 03:30:13,928 | INFO     | did not find any defunct processes belonging to 92239
[2025-05-25 13:30:25] 2025-05-25 03:30:13,928 | INFO     | ready for new job
[2025-05-25 13:30:25] 2025-05-25 03:30:13,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 13:30:25] 2025-05-25 03:30:13,929 | INFO     | **************************************
[2025-05-25 13:30:25] 2025-05-25 03:30:13,929 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 13:30:25] 2025-05-25 03:30:13,929 | INFO     | **************************************
[2025-05-25 13:30:25] 2025-05-25 03:30:13,929 | INFO     | 
[2025-05-25 13:30:25] 2025-05-25 03:30:13,930 | INFO     | pilot is running in a VM
[2025-05-25 13:30:25] 2025-05-25 03:30:13,930 | INFO     | architecture information:
[2025-05-25 13:30:25] 2025-05-25 03:30:13,931 | INFO     | executing command: cat /etc/os-release
[2025-05-25 13:30:25] 2025-05-25 03:30:13,957 | INFO     | cat /etc/os-release:
[2025-05-25 13:30:25] NAME="CentOS Linux"
[2025-05-25 13:30:25] VERSION="7 (Core)"
[2025-05-25 13:30:25] ID="centos"
[2025-05-25 13:30:25] ID_LIKE="rhel fedora"
[2025-05-25 13:30:25] VERSION_ID="7"
[2025-05-25 13:30:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 13:30:25] ANSI_COLOR="0;31"
[2025-05-25 13:30:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 13:30:25] HOME_URL="https://www.centos.org/"
[2025-05-25 13:30:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 13:30:25] 
[2025-05-25 13:30:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 13:30:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 13:30:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 13:30:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 13:30:25] 
[2025-05-25 13:30:25] 2025-05-25 03:30:13,958 | INFO     | **************************************
[2025-05-25 13:30:25] 2025-05-25 03:30:14,461 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-05-25 13:30:25] 2025-05-25 03:30:14,496 | INFO     | sufficient remaining disk space (91453652992 B)
[2025-05-25 13:30:25] 2025-05-25 03:30:14,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 13:30:25] 2025-05-25 03:30:14,496 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 13:30:25] 2025-05-25 03:30:14,496 | INFO     | update_server=False
[2025-05-25 13:30:25] 2025-05-25 03:30:14,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 13:30:25] 2025-05-25 03:30:14,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:30:25] 2025-05-25 03:30:14,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:30:25] 2025-05-25 03:30:14,497 | INFO     | aborting loop
[2025-05-25 13:30:25] 2025-05-25 03:30:14,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 13:30:25] 2025-05-25 03:30:14,506 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 13:30:25] 2025-05-25 03:30:14,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 13:30:25] 2025-05-25 03:30:14,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 13:30:25] 2025-05-25 03:30:14,562 | INFO     | all job control threads have been joined
[2025-05-25 13:30:25] 2025-05-25 03:30:15,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 13:30:25] 2025-05-25 03:30:15,374 | INFO     | all data control threads have been joined
[2025-05-25 13:30:25] 2025-05-25 03:30:15,502 | INFO     | [job] retrieve thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:15,503 | INFO     | [job] queue monitor thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:15,503 | INFO     | [job] job monitor thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:15,568 | INFO     | [job] control thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:15,618 | INFO     | all payload control threads have been joined
[2025-05-25 13:30:25] 2025-05-25 03:30:15,696 | INFO     | [payload] validate_post thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:15,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,376 | INFO     | [data] control thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,504 | INFO     | [data] copytool_out thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,624 | INFO     | [payload] control thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,691 | INFO     | [data] copytool_in thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,691 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,708 | INFO     | [payload] failed_post thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,715 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,735 | INFO     | [job] validate thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:16,987 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:19,231 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 13:30:25] 2025-05-25 03:30:20,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132615616034624)>', '<ExcThread(monitor, started 132614497236736)>']
[2025-05-25 13:30:25] 2025-05-25 03:30:20,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 13:30:25] 2025-05-25 03:30:20,539 | INFO     | [monitor] control thread has ended
[2025-05-25 13:30:25] 2025-05-25 03:30:25,224 | INFO     | all workflow threads have been joined
[2025-05-25 13:30:25] 2025-05-25 03:30:25,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 13:30:25] 2025-05-25 03:30:25,225 | INFO     | traces error code: 0
[2025-05-25 13:30:25] 2025-05-25 03:30:25,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 13:30:25] 2025-05-25 03:30:25,326 [wrapper] ==== pilot stdout END ====
[2025-05-25 13:30:25] 2025-05-25 03:30:25,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 13:30:25] 2025-05-25 03:30:25,339 [wrapper] pilotpid: 85804
[2025-05-25 13:30:25] 2025-05-25 03:30:25,344 [wrapper] Pilot exit status: 0
[2025-05-25 13:30:25] 2025-05-25 03:30:25,372 [wrapper] pandaids: 6665150364
[2025-05-25 13:30:25] 2025-05-25 03:30:25,446 [wrapper] cleanup supervisor_pilot  106390 85805
[2025-05-25 13:30:25] 2025-05-25 03:30:25,452 [wrapper] Test setup, not cleaning
[2025-05-25 13:30:25] 2025-05-25 03:30:25,458 [wrapper] apfmon messages muted
[2025-05-25 13:30:25] 2025-05-25 03:30:25,465 [wrapper] ==== wrapper stdout END ====
[2025-05-25 13:30:25] 2025-05-25 03:30:25,470 [wrapper] ==== wrapper stderr END ====
[2025-05-25 13:30:25]  *** Error codes and diagnostics ***
[2025-05-25 13:30:25]     "exeErrorCode": 0,
[2025-05-25 13:30:25]     "exeErrorDiag": "",
[2025-05-25 13:30:25]     "pilotErrorCode": 0,
[2025-05-25 13:30:25]     "pilotErrorDiag": "",
[2025-05-25 13:30:25]  *** Listing of results directory ***
[2025-05-25 13:30:25] total 420408
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc    495897 May 24 14:11 pilot3.tar.gz
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc      5111 May 24 14:17 queuedata.json
[2025-05-25 13:30:25] -rwx------ 1 boinc boinc     37140 May 24 14:17 runpilot2-wrapper.sh
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc       100 May 25 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 13:30:25] -rwxr-xr-x 1 boinc boinc      7986 May 25 11:41 run_atlas
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc       105 May 25 11:41 job.xml
[2025-05-25 13:30:25] -rw-r--r-- 2 boinc boinc     15093 May 25 11:41 start_atlas.sh
[2025-05-25 13:30:25] drwxrwx--x 2 boinc boinc      4096 May 25 11:41 shared
[2025-05-25 13:30:25] -rw-r--r-- 2 boinc boinc    508874 May 25 11:41 input.tar.gz
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc      6311 May 25 11:41 init_data.xml
[2025-05-25 13:30:25] -rw-r--r-- 2 boinc boinc 222757946 May 25 11:41 EVNT.44871834._000107.pool.root.1
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc         0 May 25 11:41 boinc_lockfile
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc      2556 May 25 11:41 pandaJob.out
[2025-05-25 13:30:25] -rw------- 1 boinc boinc    990803 May 25 11:42 agis_schedconf.cvmfs.json
[2025-05-25 13:30:25] -rw------- 1 boinc boinc   1596740 May 25 11:42 agis_ddmendpoints.agis.ALL.json
[2025-05-25 13:30:25] drwx------ 4 boinc boinc      4096 May 25 11:42 pilot3
[2025-05-25 13:30:25] -rw------- 1 boinc boinc 202346384 May 25 13:29 HITS.44871837._002654.pool.root.1
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc       529 May 25 13:29 boinc_task_state.xml
[2025-05-25 13:30:25] -rw------- 1 boinc boinc        96 May 25 13:29 pilot_heartbeat.json
[2025-05-25 13:30:25] -rw------- 1 boinc boinc      1010 May 25 13:29 memory_monitor_summary.json
[2025-05-25 13:30:25] -rw------- 1 boinc boinc    258140 May 25 13:29 log.44871837._002654.job.log.tgz.1
[2025-05-25 13:30:25] -rw------- 1 boinc boinc      7646 May 25 13:30 heartbeat.json
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc      8192 May 25 13:30 boinc_mmap_file
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc        27 May 25 13:30 wrapper_checkpoint.txt
[2025-05-25 13:30:25] -rw------- 1 boinc boinc      4415 May 25 13:30 pilotlog.txt
[2025-05-25 13:30:25] -rw------- 1 boinc boinc    521177 May 25 13:30 log.44871837._002654.job.log.1
[2025-05-25 13:30:25] -rw------- 1 boinc boinc       357 May 25 13:30 output.list
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc       620 May 25 13:30 runtime_log
[2025-05-25 13:30:25] -rw------- 1 boinc boinc    798720 May 25 13:30 result.tar.gz
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc      8639 May 25 13:30 runtime_log.err
[2025-05-25 13:30:25] -rw------- 1 boinc boinc       648 May 25 13:30 4zMLDmSVvc7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg7KKDmco5ign.diag
[2025-05-25 13:30:25] -rw-r--r-- 1 boinc boinc     21266 May 25 13:30 stderr.txt
[2025-05-25 13:30:25] HITS file was successfully produced:
[2025-05-25 13:30:25] -rw------- 1 boinc boinc 202346384 May 25 13:29 shared/HITS.pool.root.1
[2025-05-25 13:30:25]  *** Contents of shared directory: ***
[2025-05-25 13:30:25] total 416448
[2025-05-25 13:30:25] -rw-r--r-- 2 boinc boinc     15093 May 25 11:41 start_atlas.sh
[2025-05-25 13:30:25] -rw-r--r-- 2 boinc boinc    508874 May 25 11:41 input.tar.gz
[2025-05-25 13:30:25] -rw-r--r-- 2 boinc boinc 222757946 May 25 11:41 ATLAS.root_0
[2025-05-25 13:30:25] -rw------- 1 boinc boinc 202346384 May 25 13:29 HITS.pool.root.1
[2025-05-25 13:30:25] -rw------- 1 boinc boinc    798720 May 25 13:30 result.tar.gz
13:30:27 (82203): run_atlas exited; CPU time 29605.368378
13:30:27 (82203): called boinc_finish(0)

</stderr_txt>
]]>

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