Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:25 (2318732): wrapper (7.7.26015): starting
09:44:25 (2318732): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 09:44:25] Arguments: --nthreads 6
[2025-05-25 09:44:25] Threads: 6
[2025-05-25 09:44:25] Checking for CVMFS
[2025-05-25 09:44:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 09:44:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 09:44:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 09:44:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 09:44:26] 2.11.5.0 1578993 922 70004 146384 0 56 41621165 52428800 1858 130560 0 2041805 99.996 235706 96 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 09:44:26] CVMFS is ok
[2025-05-25 09:44:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 09:44:26] Checking for apptainer binary...
[2025-05-25 09:44:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 09:44:26] Running /usr/bin/apptainer --version
[2025-05-25 09:44:26] apptainer version 1.3.5-1.el9
[2025-05-25 09:44:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 09:44:26] testio008
[2025-05-25 09:44:26] apptainer works
[2025-05-25 09:44:26] Set ATHENA_PROC_NUMBER=6
[2025-05-25 09:44:26] Set ATHENA_CORE_NUMBER=6
[2025-05-25 09:44:26] Starting ATLAS job with PandaID=6665630839
[2025-05-25 09:44:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 11:15:59]  *** The last 200 lines of the pilot log: ***
[2025-05-25 11:15:59] 2025-05-25 02:15:01,404 | INFO     | will send heartbeat for job in 'finished' state
[2025-05-25 11:15:59] 2025-05-25 02:15:01,404 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-05-25 11:15:59] 2025-05-25 02:15:01,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 11:15:59] 2025-05-25 02:15:01,404 | INFO     | log transfer has been attempted: DONE
[2025-05-25 11:15:59] 2025-05-25 02:15:01,405 | INFO     | job 6665630839 has state 'running' - writing heartbeat
[2025-05-25 11:15:59] 2025-05-25 02:15:01,405 | INFO     | total number of processed events: 400 (read)
[2025-05-25 11:15:59] 2025-05-25 02:15:01,405 | INFO     | executing command: lscpu
[2025-05-25 11:15:59] 2025-05-25 02:15:01,417 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 11:15:59] 2025-05-25 02:15:03,131 | INFO     | job 6665630839 has state=finished
[2025-05-25 11:15:59] 2025-05-25 02:15:03,131 | INFO     | preparing for final server update for job 6665630839 in state='finished'
[2025-05-25 11:15:59] 2025-05-25 02:15:03,132 | INFO     | this job has now completed (state=finished)
[2025-05-25 11:15:59] 2025-05-25 02:15:03,132 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 11:15:59] 2025-05-25 02:15:03,132 | INFO     | log transfer has been attempted: DONE
[2025-05-25 11:15:59] 2025-05-25 02:15:03,132 | INFO     | job 6665630839 has finished - writing final server update
[2025-05-25 11:15:59] 2025-05-25 02:15:03,132 | INFO     | total number of processed events: 400 (read)
[2025-05-25 11:15:59] 2025-05-25 02:15:03,133 | INFO     | executing command: lscpu
[2025-05-25 11:15:59] 2025-05-25 02:15:06,164 | INFO     | PID=2322446 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 11:15:59] 2025-05-25 02:15:06,164 | INFO     | .. there are 3 such processes running
[2025-05-25 11:15:59] 2025-05-25 02:15:19,192 | INFO     | 5450s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-25 11:15:59] 2025-05-25 02:15:28,279 | INFO     | PID=2322446 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 11:15:59] 2025-05-25 02:15:28,280 | INFO     | .. there are 3 such processes running
[2025-05-25 11:15:59] 2025-05-25 02:15:37,382 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 11:15:59] 2025-05-25 02:15:37,383 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6665630839/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 11:15:59] 2025-05-25 02:15:37,385 | INFO     | extracted standard info from prmon json
[2025-05-25 11:15:59] 2025-05-25 02:15:37,385 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:15:59] 2025-05-25 02:15:37,385 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:15:59] 2025-05-25 02:15:37,385 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | fitting pss+swap vs Time
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | sum of square deviations: 170944600.5
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | sum of deviations: 11075708420.5
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | mean x: 1748136671.5
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | mean y: 2415955.2804878047
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | -- intersect: -113261483554.18307
[2025-05-25 11:15:59] 2025-05-25 02:15:37,386 | INFO     | intersect: -113261483554.18307
[2025-05-25 11:15:59] 2025-05-25 02:15:37,387 | INFO     | chi2: 1.5152358929381473
[2025-05-25 11:15:59] 2025-05-25 02:15:37,387 | INFO     | -- intersect: -113261483554.18307
[2025-05-25 11:15:59] 2025-05-25 02:15:37,387 | INFO     | current memory leak: 64.79 B/s (using 82 data points, chi2=1.52)
[2025-05-25 11:15:59] 2025-05-25 02:15:37,396 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6665630839/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | INFO     | extracted standard info from prmon json
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 11:15:59] 2025-05-25 02:15:38,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | fitting pss+swap vs Time
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | sum of square deviations: 170944600.5
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | sum of deviations: 11075708420.5
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | mean x: 1748136671.5
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | mean y: 2415955.2804878047
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | -- intersect: -113261483554.18307
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | intersect: -113261483554.18307
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | chi2: 1.5152358929381473
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | -- intersect: -113261483554.18307
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | current memory leak: 64.79 B/s (using 82 data points, chi2=1.52)
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | ..............................
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . Timing measurements:
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . get job = 0 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . initial setup = 8 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . payload setup = 3 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . stage-in = 0 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . payload execution = 5400 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . stage-out = 0 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | . log creation = 0 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,779 | INFO     | ..............................
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | 
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | job summary report
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | --------------------------------------------------
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | PanDA job id: 6665630839
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | task id: 44871837
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | errors: (none)
[2025-05-25 11:15:59] 2025-05-25 02:15:38,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | pilot state: finished 
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | transexitcode: 0
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | exeerrorcode: 0
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | exeerrordiag: 
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | exitcode: 0
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | exitmsg: OK
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | cpuconsumptiontime: 27270 s
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | nevents: 400
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | neventsw: 0
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | pid: 2328983
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | pgrp: 2328983
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | corecount: 6
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | event service: False
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | sizes: {0: 2393739, 2: 2393945, 11: 2393973, 5407: 2420499, 5408: 2429440, 5410: 2429496, 5449: 2429794}
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | --------------------------------------------------
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | 
[2025-05-25 11:15:59] 2025-05-25 02:15:38,908 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-05-25 11:15:59] 2025-05-25 02:15:38,918 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,918 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | job 6665630839 has completed (purged errors)
[2025-05-25 11:15:59] 2025-05-25 02:15:38,919 | INFO     | overall cleanup function is called
[2025-05-25 11:15:59] 2025-05-25 02:15:39,925 | INFO     | --- collectZombieJob: --- 10, [2328983]
[2025-05-25 11:15:59] 2025-05-25 02:15:39,926 | INFO     | zombie collector waiting for pid 2328983
[2025-05-25 11:15:59] 2025-05-25 02:15:39,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 11:15:59] 2025-05-25 02:15:39,926 | INFO     | collected zombie processes
[2025-05-25 11:15:59] 2025-05-25 02:15:39,926 | INFO     | will attempt to kill all subprocesses of pid=2328983
[2025-05-25 11:15:59] 2025-05-25 02:15:39,975 | INFO     | process IDs to be killed: [2328983] (in reverse order)
[2025-05-25 11:15:59] 2025-05-25 02:15:39,997 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 11:15:59] 2025-05-25 02:15:39,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 11:15:59] 2025-05-25 02:15:40,000 | INFO     | did not find any defunct processes belonging to 2328983
[2025-05-25 11:15:59] 2025-05-25 02:15:40,002 | INFO     | did not find any defunct processes belonging to 2328983
[2025-05-25 11:15:59] 2025-05-25 02:15:40,002 | INFO     | ready for new job
[2025-05-25 11:15:59] 2025-05-25 02:15:40,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 11:15:59] 2025-05-25 02:15:40,003 | INFO     | **************************************
[2025-05-25 11:15:59] 2025-05-25 02:15:40,003 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 11:15:59] 2025-05-25 02:15:40,003 | INFO     | **************************************
[2025-05-25 11:15:59] 2025-05-25 02:15:40,003 | INFO     | 
[2025-05-25 11:15:59] 2025-05-25 02:15:40,003 | INFO     | architecture information:
[2025-05-25 11:15:59] 2025-05-25 02:15:40,004 | INFO     | executing command: cat /etc/os-release
[2025-05-25 11:15:59] 2025-05-25 02:15:40,009 | INFO     | cat /etc/os-release:
[2025-05-25 11:15:59] NAME="CentOS Linux"
[2025-05-25 11:15:59] VERSION="7 (Core)"
[2025-05-25 11:15:59] ID="centos"
[2025-05-25 11:15:59] ID_LIKE="rhel fedora"
[2025-05-25 11:15:59] VERSION_ID="7"
[2025-05-25 11:15:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 11:15:59] ANSI_COLOR="0;31"
[2025-05-25 11:15:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 11:15:59] HOME_URL="https://www.centos.org/"
[2025-05-25 11:15:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 11:15:59] 
[2025-05-25 11:15:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 11:15:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 11:15:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 11:15:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 11:15:59] 
[2025-05-25 11:15:59] 2025-05-25 02:15:40,009 | INFO     | **************************************
[2025-05-25 11:15:59] 2025-05-25 02:15:40,512 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | INFO     | sufficient remaining disk space (283051556864 B)
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | INFO     | update_server=False
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 11:15:59] 2025-05-25 02:15:40,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:15:59] 2025-05-25 02:15:40,602 | INFO     | all data control threads have been joined
[2025-05-25 11:15:59] 2025-05-25 02:15:40,648 | INFO     | all job control threads have been joined
[2025-05-25 11:15:59] 2025-05-25 02:15:40,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 11:15:59] 2025-05-25 02:15:40,894 | INFO     | aborting loop
[2025-05-25 11:15:59] 2025-05-25 02:15:41,135 | INFO     | all payload control threads have been joined
[2025-05-25 11:15:59] 2025-05-25 02:15:41,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 11:15:59] 2025-05-25 02:15:41,523 | INFO     | [job] queue monitor thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:41,524 | INFO     | [job] retrieve thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:41,604 | INFO     | [data] control thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:41,654 | INFO     | [job] control thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:41,851 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:41,864 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:41,899 | INFO     | [job] job monitor thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:42,099 | INFO     | [payload] failed_post thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:42,140 | INFO     | [payload] control thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:42,149 | INFO     | [data] copytool_in thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:42,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 11:15:59] 2025-05-25 02:15:42,653 | INFO     | [job] validate thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:42,658 | INFO     | [payload] validate_post thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:42,823 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:43,301 | INFO     | [data] copytool_out thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:46,459 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:51,414 | INFO     | job.realtimelogging is not enabled
[2025-05-25 11:15:59] 2025-05-25 02:15:52,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 11:15:59] 2025-05-25 02:15:54,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140583021541184)>', '<ExcThread(monitor, started 140582231979776)>']
[2025-05-25 11:15:59] 2025-05-25 02:15:54,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 11:15:59] 2025-05-25 02:15:54,588 | INFO     | [monitor] control thread has ended
[2025-05-25 11:15:59] 2025-05-25 02:15:59,144 | INFO     | all workflow threads have been joined
[2025-05-25 11:15:59] 2025-05-25 02:15:59,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 11:15:59] 2025-05-25 02:15:59,144 | INFO     | traces error code: 0
[2025-05-25 11:15:59] 2025-05-25 02:15:59,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 11:15:59] 2025-05-25 02:15:59,197 [wrapper] ==== pilot stdout END ====
[2025-05-25 11:15:59] 2025-05-25 02:15:59,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 11:15:59] 2025-05-25 02:15:59,199 [wrapper] pilotpid: 2322446
[2025-05-25 11:15:59] 2025-05-25 02:15:59,200 [wrapper] Pilot exit status: 0
[2025-05-25 11:15:59] 2025-05-25 02:15:59,204 [wrapper] pandaids: 6665630839
[2025-05-25 11:15:59] 2025-05-25 02:15:59,216 [wrapper] cleanup supervisor_pilot 2387275 2322447
[2025-05-25 11:15:59] 2025-05-25 02:15:59,217 [wrapper] Test setup, not cleaning
[2025-05-25 11:15:59] 2025-05-25 02:15:59,218 [wrapper] apfmon messages muted
[2025-05-25 11:15:59] 2025-05-25 02:15:59,219 [wrapper] ==== wrapper stdout END ====
[2025-05-25 11:15:59] 2025-05-25 02:15:59,220 [wrapper] ==== wrapper stderr END ====
[2025-05-25 11:15:59]  *** Error codes and diagnostics ***
[2025-05-25 11:15:59]     "exeErrorCode": 0,
[2025-05-25 11:15:59]     "exeErrorDiag": "",
[2025-05-25 11:15:59]     "pilotErrorCode": 0,
[2025-05-25 11:15:59]     "pilotErrorDiag": "",
[2025-05-25 11:15:59]  *** Listing of results directory ***
[2025-05-25 11:15:59] total 419308
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc    495897 May 24 23:30 pilot3.tar.gz
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc      5111 May 24 23:54 queuedata.json
[2025-05-25 11:15:59] -rwx------. 1 boinc boinc     37140 May 24 23:57 runpilot2-wrapper.sh
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc       100 May 25 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 11:15:59] -rwxr-xr-x. 1 boinc boinc      7986 May 25 09:44 run_atlas
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc       105 May 25 09:44 job.xml
[2025-05-25 11:15:59] -rw-r--r--. 2 boinc boinc     15093 May 25 09:44 start_atlas.sh
[2025-05-25 11:15:59] drwxrwx--x. 2 boinc boinc        68 May 25 09:44 shared
[2025-05-25 11:15:59] -rw-r--r--. 2 boinc boinc    508879 May 25 09:44 input.tar.gz
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc      9509 May 25 09:44 init_data.xml
[2025-05-25 11:15:59] -rw-r--r--. 2 boinc boinc 223793143 May 25 09:44 EVNT.44871834._000769.pool.root.1
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc         0 May 25 09:44 boinc_lockfile
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc      2558 May 25 09:44 pandaJob.out
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc    990811 May 25 09:44 agis_schedconf.cvmfs.json
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc   1596740 May 25 09:44 agis_ddmendpoints.agis.ALL.json
[2025-05-25 11:15:59] drwx------. 4 boinc boinc      4096 May 25 09:44 pilot3
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc 200121418 May 25 11:14 HITS.44871837._019280.pool.root.1
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc       529 May 25 11:14 boinc_task_state.xml
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc      1018 May 25 11:14 memory_monitor_summary.json
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc    277068 May 25 11:14 log.44871837._019280.job.log.tgz.1
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc        95 May 25 11:15 pilot_heartbeat.json
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc      7660 May 25 11:15 heartbeat.json
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc      8192 May 25 11:15 boinc_mmap_file
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc        27 May 25 11:15 wrapper_checkpoint.txt
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc      4549 May 25 11:15 pilotlog.txt
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc    540751 May 25 11:15 log.44871837._019280.job.log.1
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc       357 May 25 11:15 output.list
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc       620 May 25 11:15 runtime_log
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc    839680 May 25 11:15 result.tar.gz
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc       641 May 25 11:15 z3SMDmZU5c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZnRKDmv18r4m.diag
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc      8617 May 25 11:15 runtime_log.err
[2025-05-25 11:15:59] -rw-r--r--. 1 boinc boinc     21523 May 25 11:15 stderr.txt
[2025-05-25 11:15:59] HITS file was successfully produced:
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc 200121418 May 25 11:14 shared/HITS.pool.root.1
[2025-05-25 11:15:59]  *** Contents of shared directory: ***
[2025-05-25 11:15:59] total 415316
[2025-05-25 11:15:59] -rw-r--r--. 2 boinc boinc     15093 May 25 09:44 start_atlas.sh
[2025-05-25 11:15:59] -rw-r--r--. 2 boinc boinc    508879 May 25 09:44 input.tar.gz
[2025-05-25 11:15:59] -rw-r--r--. 2 boinc boinc 223793143 May 25 09:44 ATLAS.root_0
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc 200121418 May 25 11:14 HITS.pool.root.1
[2025-05-25 11:15:59] -rw-------. 1 boinc boinc    839680 May 25 11:15 result.tar.gz
11:16:00 (2318732): run_atlas exited; CPU time 27308.291118
11:16:00 (2318732): called boinc_finish(0)

</stderr_txt>
]]>

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