Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:00:18 (1569828): wrapper (7.7.26015): starting
06:00:18 (1569828): wrapper: running run_atlas (--nthreads 12)
[2025-05-25 06:00:18] Arguments: --nthreads 12
[2025-05-25 06:00:18] Threads: 12
[2025-05-25 06:00:18] Checking for CVMFS
[2025-05-25 06:00:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 06:00:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 06:00:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 06:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 06:00:18] 2.12.7.0 982406 1495 74356 146389 0 56 3264688 4097025 0 130560 0 1229000 99.988 456396 8398 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-05-25 06:00:18] CVMFS is ok
[2025-05-25 06:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 06:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 06:00:18] Further information can be found at the LHC@home message board.
[2025-05-25 06:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 06:00:18] Checking for apptainer binary...
[2025-05-25 06:00:18] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-05-25 06:00:18] apptainer is not installed, using version from CVMFS
[2025-05-25 06:00:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 06:00:18] pckelar8.cern.ch
[2025-05-25 06:00:18] apptainer works
[2025-05-25 06:00:18] Set ATHENA_PROC_NUMBER=12
[2025-05-25 06:00:18] Set ATHENA_CORE_NUMBER=12
[2025-05-25 06:00:18] Starting ATLAS job with PandaID=6665630705
[2025-05-25 06:00:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 07:26:35]  *** The last 200 lines of the pilot log: ***
[2025-05-25 07:26:35]  lfn=log.44871837._019147.job.log.tgz.1
[2025-05-25 07:26:35]  mtime=0
[2025-05-25 07:26:35]  protocol_id=None
[2025-05-25 07:26:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 07:26:35]  replicas=None
[2025-05-25 07:26:35]  scope=mc23_13p6TeV
[2025-05-25 07:26:35]  status=None
[2025-05-25 07:26:35]  status_code=0
[2025-05-25 07:26:35]  storage_token=
[2025-05-25 07:26:35]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6665630705/log.44871837._019147.job.log.tgz.1
[2025-05-25 07:26:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/16/log.44871837._019147.job.log.tgz.1
[2025-05-25 07:26:35]  workdir=None
[2025-05-25 07:26:35] ]
[2025-05-25 07:26:35] 2025-05-25 05:26:06,367 | INFO     | transferring file log.44871837._019147.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6665630705/log.44871837._019147.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-25 07:26:35] 2025-05-25 05:26:06,367 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6665630705/log.44871837._019147.job.log.tgz.1 /var/lib/boinc/slots/0/log.44871837._019147.job
[2025-05-25 07:26:35] 2025-05-25 05:26:06,383 | INFO     | adding to output.list: log.44871837._019147.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/16/log.44871837._019147.job.log.tg
[2025-05-25 07:26:35] 2025-05-25 05:26:06,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 07:26:35] 2025-05-25 05:26:06,384 | INFO     | summary of transferred files:
[2025-05-25 07:26:35] 2025-05-25 05:26:06,384 | INFO     |  -- lfn=log.44871837._019147.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 07:26:35] 2025-05-25 05:26:06,384 | INFO     | stage-out finished correctly
[2025-05-25 07:26:35] 2025-05-25 05:26:09,415 | WARNING  | process 1580584 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 07:26:35] 2025-05-25 05:26:09,415 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6665630705/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 07:26:35] 2025-05-25 05:26:09,481 | INFO     | number of running child processes to parent process 1580584: 1
[2025-05-25 07:26:35] 2025-05-25 05:26:09,481 | INFO     | maximum number of monitored processes: 6
[2025-05-25 07:26:35] 2025-05-25 05:26:09,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 07:26:35] 2025-05-25 05:26:10,371 | INFO     | job 6665630705 has state=finished
[2025-05-25 07:26:35] 2025-05-25 05:26:10,371 | INFO     | preparing for final server update for job 6665630705 in state='finished'
[2025-05-25 07:26:35] 2025-05-25 05:26:10,372 | INFO     | this job has now completed (state=finished)
[2025-05-25 07:26:35] 2025-05-25 05:26:10,372 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 07:26:35] 2025-05-25 05:26:10,372 | INFO     | log transfer has been attempted: DONE
[2025-05-25 07:26:35] 2025-05-25 05:26:10,372 | INFO     | job 6665630705 has finished - writing final server update
[2025-05-25 07:26:35] 2025-05-25 05:26:10,372 | INFO     | total number of processed events: 400 (read)
[2025-05-25 07:26:35] 2025-05-25 05:26:10,374 | INFO     | executing command: lscpu
[2025-05-25 07:26:35] 2025-05-25 05:26:10,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 07:26:35] 2025-05-25 05:26:11,984 | INFO     | monitor loop #392: job 0:6665630705 is in state 'finished'
[2025-05-25 07:26:35] 2025-05-25 05:26:11,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,486 | INFO     | monitor loop #393: job 0:6665630705 is in state 'finished'
[2025-05-25 07:26:35] 2025-05-25 05:26:14,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,511 | INFO     | CPU arch script returned: x86-64-v2
[2025-05-25 07:26:35] 2025-05-25 05:26:14,512 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6665630705/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,512 | INFO     | extracted standard info from prmon json
[2025-05-25 07:26:35] 2025-05-25 05:26:14,512 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:26:35] 2025-05-25 05:26:14,512 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:26:35] 2025-05-25 05:26:14,513 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:26:35] 2025-05-25 05:26:14,513 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:26:35] 2025-05-25 05:26:14,515 | INFO     | fitting pss+swap vs Time
[2025-05-25 07:26:35] 2025-05-25 05:26:14,515 | INFO     | sum of square deviations: 141539398.0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,515 | INFO     | sum of deviations: -6519673107.000001
[2025-05-25 07:26:35] 2025-05-25 05:26:14,515 | INFO     | mean x: 1748148271.0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,515 | INFO     | mean y: 2804129.8311688313
[2025-05-25 07:26:35] 2025-05-25 05:26:14,515 | INFO     | -- intersect: 80527064021.6759
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | intersect: 80527064021.6759
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | chi2: 0.09988550535922518
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | -- intersect: 80527064021.6759
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | current memory leak: -46.06 B/s (using 77 data points, chi2=0.10)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | ..............................
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | . Timing measurements:
[2025-05-25 07:26:35] 2025-05-25 05:26:14,516 | INFO     | . get job = 0 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | . initial setup = 1 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | . payload setup = 5 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | . stage-in = 0 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | . payload execution = 5116 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | . stage-out = 0 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | . log creation = 0 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,517 | INFO     | ..............................
[2025-05-25 07:26:35] 2025-05-25 05:26:14,885 | INFO     | 
[2025-05-25 07:26:35] 2025-05-25 05:26:14,885 | INFO     | job summary report
[2025-05-25 07:26:35] 2025-05-25 05:26:14,885 | INFO     | --------------------------------------------------
[2025-05-25 07:26:35] 2025-05-25 05:26:14,885 | INFO     | PanDA job id: 6665630705
[2025-05-25 07:26:35] 2025-05-25 05:26:14,885 | INFO     | task id: 44871837
[2025-05-25 07:26:35] 2025-05-25 05:26:14,885 | INFO     | errors: (none)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | pilot state: finished 
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | transexitcode: 0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | exeerrorcode: 0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | exeerrordiag: 
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | exitcode: 0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | exitmsg: OK
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | cpuconsumptiontime: 55919 s
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | nevents: 400
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | neventsw: 0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,886 | INFO     | pid: 1580584
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | pgrp: 1580584
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | corecount: 12
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | event service: False
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | sizes: {0: 2393562, 1: 2393761, 4: 2393967, 11: 2393995, 5126: 2420301, 5127: 2429242, 5130: 2429426, 5135: 2429596}
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | --------------------------------------------------
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | 
[2025-05-25 07:26:35] 2025-05-25 05:26:14,887 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-05-25 07:26:35] 2025-05-25 05:26:14,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | job 6665630705 has completed (purged errors)
[2025-05-25 07:26:35] 2025-05-25 05:26:14,907 | INFO     | overall cleanup function is called
[2025-05-25 07:26:35] 2025-05-25 05:26:15,915 | INFO     | --- collectZombieJob: --- 10, [1580584]
[2025-05-25 07:26:35] 2025-05-25 05:26:15,915 | INFO     | zombie collector waiting for pid 1580584
[2025-05-25 07:26:35] 2025-05-25 05:26:15,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 07:26:35] 2025-05-25 05:26:15,915 | INFO     | collected zombie processes
[2025-05-25 07:26:35] 2025-05-25 05:26:15,915 | INFO     | will attempt to kill all subprocesses of pid=1580584
[2025-05-25 07:26:35] 2025-05-25 05:26:15,988 | INFO     | process IDs to be killed: [1580584] (in reverse order)
[2025-05-25 07:26:35] 2025-05-25 05:26:16,020 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 07:26:35] 2025-05-25 05:26:16,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 07:26:35] 2025-05-25 05:26:16,022 | INFO     | did not find any defunct processes belonging to 1580584
[2025-05-25 07:26:35] 2025-05-25 05:26:16,024 | INFO     | did not find any defunct processes belonging to 1580584
[2025-05-25 07:26:35] 2025-05-25 05:26:16,024 | INFO     | ready for new job
[2025-05-25 07:26:35] 2025-05-25 05:26:16,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 07:26:35] 2025-05-25 05:26:16,025 | INFO     | **************************************
[2025-05-25 07:26:35] 2025-05-25 05:26:16,026 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 07:26:35] 2025-05-25 05:26:16,026 | INFO     | **************************************
[2025-05-25 07:26:35] 2025-05-25 05:26:16,026 | INFO     | 
[2025-05-25 07:26:35] 2025-05-25 05:26:16,026 | INFO     | architecture information:
[2025-05-25 07:26:35] 2025-05-25 05:26:16,026 | INFO     | executing command: cat /etc/os-release
[2025-05-25 07:26:35] 2025-05-25 05:26:16,037 | INFO     | cat /etc/os-release:
[2025-05-25 07:26:35] NAME="CentOS Linux"
[2025-05-25 07:26:35] VERSION="7 (Core)"
[2025-05-25 07:26:35] ID="centos"
[2025-05-25 07:26:35] ID_LIKE="rhel fedora"
[2025-05-25 07:26:35] VERSION_ID="7"
[2025-05-25 07:26:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 07:26:35] ANSI_COLOR="0;31"
[2025-05-25 07:26:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 07:26:35] HOME_URL="https://www.centos.org/"
[2025-05-25 07:26:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 07:26:35] 
[2025-05-25 07:26:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 07:26:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 07:26:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 07:26:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 07:26:35] 
[2025-05-25 07:26:35] 2025-05-25 05:26:16,037 | INFO     | **************************************
[2025-05-25 07:26:35] 2025-05-25 05:26:16,540 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-05-25 07:26:35] 2025-05-25 05:26:16,552 | INFO     | sufficient remaining disk space (1716747501568 B)
[2025-05-25 07:26:35] 2025-05-25 05:26:16,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 07:26:35] 2025-05-25 05:26:16,552 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 07:26:35] 2025-05-25 05:26:16,552 | INFO     | update_server=False
[2025-05-25 07:26:35] 2025-05-25 05:26:16,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 07:26:35] 2025-05-25 05:26:16,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:26:35] 2025-05-25 05:26:16,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 07:26:35] 2025-05-25 05:26:16,810 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 07:26:35] 2025-05-25 05:26:16,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 07:26:35] 2025-05-25 05:26:16,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 07:26:35] 2025-05-25 05:26:16,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 07:26:35] 2025-05-25 05:26:16,990 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 07:26:35] 2025-05-25 05:26:16,990 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 07:26:35] 2025-05-25 05:26:16,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:26:35] 2025-05-25 05:26:16,990 | INFO     | will abort loop
[2025-05-25 07:26:35] 2025-05-25 05:26:17,304 | INFO     | all data control threads have been joined
[2025-05-25 07:26:35] 2025-05-25 05:26:17,558 | INFO     | [job] retrieve thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:17,558 | INFO     | [job] queue monitor thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:17,661 | INFO     | [data] copytool_in thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:17,702 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:17,743 | INFO     | all payload control threads have been joined
[2025-05-25 07:26:35] 2025-05-25 05:26:17,796 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:17,912 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:17,995 | INFO     | [job] job monitor thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:18,246 | INFO     | [payload] failed_post thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:18,246 | INFO     | all job control threads have been joined
[2025-05-25 07:26:35] 2025-05-25 05:26:18,310 | INFO     | [data] control thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:18,748 | INFO     | [payload] control thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:18,792 | INFO     | [payload] validate_post thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:18,900 | INFO     | [job] validate thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:18,971 | INFO     | [data] copytool_out thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:19,252 | INFO     | [job] control thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:20,559 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:27,176 | INFO     | job.realtimelogging is not enabled
[2025-05-25 07:26:35] 2025-05-25 05:26:28,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 07:26:35] 2025-05-25 05:26:29,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714025334592)>', '<ExcThread(monitor, started 140713027155712)>']
[2025-05-25 07:26:35] 2025-05-25 05:26:30,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 07:26:35] 2025-05-25 05:26:30,877 | INFO     | [monitor] control thread has ended
[2025-05-25 07:26:35] 2025-05-25 05:26:34,992 | INFO     | all workflow threads have been joined
[2025-05-25 07:26:35] 2025-05-25 05:26:34,993 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 07:26:35] 2025-05-25 05:26:34,993 | INFO     | traces error code: 0
[2025-05-25 07:26:35] 2025-05-25 05:26:34,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 07:26:35] 2025-05-25 05:26:35,076 [wrapper] ==== pilot stdout END ====
[2025-05-25 07:26:35] 2025-05-25 05:26:35,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 07:26:35] 2025-05-25 05:26:35,081 [wrapper] pilotpid: 1573488
[2025-05-25 07:26:35] 2025-05-25 05:26:35,083 [wrapper] Pilot exit status: 0
[2025-05-25 07:26:35] 2025-05-25 05:26:35,091 [wrapper] pandaids: 6665630705
[2025-05-25 07:26:35] 2025-05-25 05:26:35,110 [wrapper] cleanup supervisor_pilot 1599846 1573489
[2025-05-25 07:26:35] 2025-05-25 05:26:35,112 [wrapper] Test setup, not cleaning
[2025-05-25 07:26:35] 2025-05-25 05:26:35,114 [wrapper] apfmon messages muted
[2025-05-25 07:26:35] 2025-05-25 05:26:35,116 [wrapper] ==== wrapper stdout END ====
[2025-05-25 07:26:35] 2025-05-25 05:26:35,118 [wrapper] ==== wrapper stderr END ====
[2025-05-25 07:26:35]  *** Error codes and diagnostics ***
[2025-05-25 07:26:35]     "exeErrorCode": 0,
[2025-05-25 07:26:35]     "exeErrorDiag": "",
[2025-05-25 07:26:35]     "pilotErrorCode": 0,
[2025-05-25 07:26:35]     "pilotErrorDiag": "",
[2025-05-25 07:26:35]  *** Listing of results directory ***
[2025-05-25 07:26:35] total 416476
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc    495897 May 24 16:30 pilot3.tar.gz
[2025-05-25 07:26:35] -rwx------ 1 boinc boinc     37140 May 24 16:51 runpilot2-wrapper.sh
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc      5111 May 24 16:51 queuedata.json
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc       100 May 25 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 07:26:35] -rwxr-xr-x 1 boinc boinc      7986 May 25 06:00 run_atlas
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc       105 May 25 06:00 job.xml
[2025-05-25 07:26:35] -rw-r--r-- 2 boinc boinc 225396271 May 25 06:00 EVNT.44871834._000764.pool.root.1
[2025-05-25 07:26:35] -rw-r--r-- 2 boinc boinc     15093 May 25 06:00 start_atlas.sh
[2025-05-25 07:26:35] drwxrwx--x 2 boinc boinc      4096 May 25 06:00 shared
[2025-05-25 07:26:35] -rw-r--r-- 2 boinc boinc    508879 May 25 06:00 input.tar.gz
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc      6249 May 25 06:00 init_data.xml
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc         0 May 25 06:00 boinc_lockfile
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc      2555 May 25 06:00 pandaJob.out
[2025-05-25 07:26:35] -rw------- 1 boinc boinc    990803 May 25 06:00 agis_schedconf.cvmfs.json
[2025-05-25 07:26:35] -rw------- 1 boinc boinc   1596740 May 25 06:00 agis_ddmendpoints.agis.ALL.json
[2025-05-25 07:26:35] drwx------ 4 boinc boinc      4096 May 25 06:00 pilot3
[2025-05-25 07:26:35] -rw------- 1 boinc boinc 195543024 May 25 07:25 HITS.44871837._019147.pool.root.1
[2025-05-25 07:26:35] -rw------- 1 boinc boinc        95 May 25 07:26 pilot_heartbeat.json
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc       529 May 25 07:26 boinc_task_state.xml
[2025-05-25 07:26:35] -rw------- 1 boinc boinc      1030 May 25 07:26 memory_monitor_summary.json
[2025-05-25 07:26:35] -rw------- 1 boinc boinc    352707 May 25 07:26 log.44871837._019147.job.log.tgz.1
[2025-05-25 07:26:35] -rw------- 1 boinc boinc      7683 May 25 07:26 heartbeat.json
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc      8192 May 25 07:26 boinc_mmap_file
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc        27 May 25 07:26 wrapper_checkpoint.txt
[2025-05-25 07:26:35] -rw------- 1 boinc boinc      4613 May 25 07:26 pilotlog.txt
[2025-05-25 07:26:35] -rw------- 1 boinc boinc    494476 May 25 07:26 log.44871837._019147.job.log.1
[2025-05-25 07:26:35] -rw------- 1 boinc boinc       357 May 25 07:26 output.list
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc       620 May 25 07:26 runtime_log
[2025-05-25 07:26:35] -rw------- 1 boinc boinc    870400 May 25 07:26 result.tar.gz
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc      8683 May 25 07:26 runtime_log.err
[2025-05-25 07:26:35] -rw------- 1 boinc boinc       657 May 25 07:26 OBuNDmgO5c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4kRKDm54Piwm.diag
[2025-05-25 07:26:35] -rw-r--r-- 1 boinc boinc     21663 May 25 07:26 stderr.txt
[2025-05-25 07:26:35] HITS file was successfully produced:
[2025-05-25 07:26:35] -rw------- 1 boinc boinc 195543024 May 25 07:25 shared/HITS.pool.root.1
[2025-05-25 07:26:35]  *** Contents of shared directory: ***
[2025-05-25 07:26:35] total 412452
[2025-05-25 07:26:35] -rw-r--r-- 2 boinc boinc 225396271 May 25 06:00 ATLAS.root_0
[2025-05-25 07:26:35] -rw-r--r-- 2 boinc boinc     15093 May 25 06:00 start_atlas.sh
[2025-05-25 07:26:35] -rw-r--r-- 2 boinc boinc    508879 May 25 06:00 input.tar.gz
[2025-05-25 07:26:35] -rw------- 1 boinc boinc 195543024 May 25 07:25 HITS.pool.root.1
[2025-05-25 07:26:35] -rw------- 1 boinc boinc    870400 May 25 07:26 result.tar.gz
07:26:36 (1569828): run_atlas exited; CPU time 55943.951696
07:26:36 (1569828): called boinc_finish(0)

</stderr_txt>
]]>

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