Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:15:19 (1523891): wrapper (7.7.26015): starting
16:15:19 (1523891): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 16:15:19] Arguments: --nthreads 8
[2025-05-24 16:15:19] Threads: 8
[2025-05-24 16:15:19] Checking for CVMFS
[2025-05-24 16:15:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 16:15:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 16:15:20] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 16:15:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 16:15:22] 2.12.6.0 7692 21934 314736 146377 2 1038 40813836 40960000 44773 16776704 0 256972734 99.753 166304503 34096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 16:15:22] CVMFS is ok
[2025-05-24 16:15:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 16:15:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 16:15:22] Further information can be found at the LHC@home message board.
[2025-05-24 16:15:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:15:22] Checking for apptainer binary...
[2025-05-24 16:15:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 16:15:22] Running /usr/bin/apptainer --version
[2025-05-24 16:15:22] apptainer version 1.4.1-1.el9
[2025-05-24 16:15:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:15:22] c8-7-4.aglt2.org
[2025-05-24 16:15:22] apptainer works
[2025-05-24 16:15:22] Set ATHENA_PROC_NUMBER=8
[2025-05-24 16:15:22] Set ATHENA_CORE_NUMBER=8
[2025-05-24 16:15:23] Starting ATLAS job with PandaID=6665630660
[2025-05-24 16:15:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:42:49]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:42:49] 2025-05-24 23:42:24,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 19:42:49] 2025-05-24 23:42:26,635 | INFO     | monitor loop #646: job 0:6665630660 is in state 'finished'
[2025-05-24 19:42:49] 2025-05-24 23:42:26,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 19:42:49] 2025-05-24 23:42:29,143 | INFO     | monitor loop #647: job 0:6665630660 is in state 'finished'
[2025-05-24 19:42:49] 2025-05-24 23:42:29,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 19:42:49] 2025-05-24 23:42:30,313 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 19:42:49] 2025-05-24 23:42:30,313 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6665630660/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 19:42:49] 2025-05-24 23:42:30,315 | INFO     | extracted standard info from prmon json
[2025-05-24 19:42:49] 2025-05-24 23:42:30,315 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:42:49] 2025-05-24 23:42:30,315 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:42:49] 2025-05-24 23:42:30,316 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:42:49] 2025-05-24 23:42:30,316 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:42:49] 2025-05-24 23:42:30,383 | INFO     | fitting pss+swap vs Time
[2025-05-24 19:42:49] 2025-05-24 23:42:30,384 | INFO     | sum of square deviations: 2370586772.142139
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | sum of deviations: 43732023511.771545
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | mean x: 1748124089.0659897
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | mean y: 2386168.7868020306
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | -- intersect: -32246593140.01373
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | intersect: -32246593140.01373
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | chi2: 5.18212325085865
[2025-05-24 19:42:49] 2025-05-24 23:42:30,385 | INFO     | sum of square deviations: 2194624647.119782
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | sum of deviations: 55624403112.614586
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | mean x: 1748123936.5677083
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | mean y: 2396254.2604166665
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | -- intersect: -44305112396.96529
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | intersect: -44305112396.96529
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | chi2: 4.450573030550394
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | current chi2=4.450573030550394 (change=14.11680473225029 %)
[2025-05-24 19:42:49] 2025-05-24 23:42:30,402 | INFO     | right removable region: 191
[2025-05-24 19:42:49] 2025-05-24 23:42:30,403 | INFO     | sum of square deviations: 2194616717.119782
[2025-05-24 19:42:49] 2025-05-24 23:42:30,403 | INFO     | sum of deviations: -17966472253.828117
[2025-05-24 19:42:49] 2025-05-24 23:42:30,403 | INFO     | mean x: 1748124241.5677083
[2025-05-24 19:42:49] 2025-05-24 23:42:30,403 | INFO     | mean y: 2439542.640625
[2025-05-24 19:42:49] 2025-05-24 23:42:30,403 | INFO     | -- intersect: 14313651809.16795
[2025-05-24 19:42:49] 2025-05-24 23:42:30,403 | INFO     | intersect: 14313651809.16795
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | chi2: 1.1089792354143886
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | current chi2=1.1089792354143886 (change=78.59990622124559 %)
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | sum of square deviations: 2027588895.2299528
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | sum of deviations: -31730936018.368984
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | mean x: 1748124394.064171
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | mean y: 2452022.780748663
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | -- intersect: 27359883024.053493
[2025-05-24 19:42:49] 2025-05-24 23:42:30,404 | INFO     | intersect: 27359883024.053493
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | chi2: 0.8417428779738688
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | current chi2=0.8417428779738688 (change=24.097507771699842 %)
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | left removable region: 20
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | sum of square deviations: 1550386504.2923932
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | sum of deviations: -17334321690.08771
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | mean x: 1748124516.0643275
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | mean y: 2463808.2807017546
[2025-05-24 19:42:49] 2025-05-24 23:42:30,405 | INFO     | -- intersect: 19547624084.05222
[2025-05-24 19:42:49] 2025-05-24 23:42:30,406 | INFO     | intersect: 19547624084.05222
[2025-05-24 19:42:49] 2025-05-24 23:42:30,406 | INFO     | chi2: 0.03883425147037909
[2025-05-24 19:42:49] 2025-05-24 23:42:30,406 | INFO     | -- intersect: 19547624084.05222
[2025-05-24 19:42:49] 2025-05-24 23:42:30,431 | INFO     | current memory leak: -11.18 B/s (using 171 data points, chi2=0.04)
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | ..............................
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . Timing measurements:
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . get job = 0 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . initial setup = 8 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . payload setup = 76 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . stage-in = 0 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . payload execution = 12047 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . stage-out = 4 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | . log creation = 0 s
[2025-05-24 19:42:49] 2025-05-24 23:42:30,432 | INFO     | ..............................
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | 
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | job summary report
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | --------------------------------------------------
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | PanDA job id: 6665630660
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | task id: 44871837
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | errors: (none)
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | pilot state: finished 
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | transexitcode: 0
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | exeerrorcode: 0
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | exeerrordiag: 
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | exitcode: 0
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | exitmsg: OK
[2025-05-24 19:42:49] 2025-05-24 23:42:31,175 | INFO     | cpuconsumptiontime: 29229 s
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | nevents: 400
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | neventsw: 0
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | pid: 1722625
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | pgrp: 1722625
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | corecount: 8
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | event service: False
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | sizes: {0: 2392911, 1: 2393596, 2: 2393795, 13: 2393795, 24: 2393851, 35: 2393879, 46: 2394035, 57: 2394063, 67: 2394091, 70: 2394325, 78: 2394353, 12128: 2423721,
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | --------------------------------------------------
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | 
[2025-05-24 19:42:49] 2025-05-24 23:42:31,176 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | job 6665630660 has completed (purged errors)
[2025-05-24 19:42:49] 2025-05-24 23:42:31,317 | INFO     | overall cleanup function is called
[2025-05-24 19:42:49] 2025-05-24 23:42:32,330 | INFO     | --- collectZombieJob: --- 10, [1722625]
[2025-05-24 19:42:49] 2025-05-24 23:42:32,330 | INFO     | zombie collector waiting for pid 1722625
[2025-05-24 19:42:49] 2025-05-24 23:42:32,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:42:49] 2025-05-24 23:42:32,330 | INFO     | collected zombie processes
[2025-05-24 19:42:49] 2025-05-24 23:42:32,330 | INFO     | will attempt to kill all subprocesses of pid=1722625
[2025-05-24 19:42:49] 2025-05-24 23:42:34,099 | INFO     | process IDs to be killed: [1722625] (in reverse order)
[2025-05-24 19:42:49] 2025-05-24 23:42:35,222 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:42:49] 2025-05-24 23:42:35,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:42:49] 2025-05-24 23:42:35,538 | INFO     | did not find any defunct processes belonging to 1722625
[2025-05-24 19:42:49] 2025-05-24 23:42:35,688 | INFO     | did not find any defunct processes belonging to 1722625
[2025-05-24 19:42:49] 2025-05-24 23:42:35,688 | INFO     | ready for new job
[2025-05-24 19:42:49] 2025-05-24 23:42:35,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:42:49] 2025-05-24 23:42:35,690 | INFO     | **************************************
[2025-05-24 19:42:49] 2025-05-24 23:42:35,690 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:42:49] 2025-05-24 23:42:35,690 | INFO     | **************************************
[2025-05-24 19:42:49] 2025-05-24 23:42:35,690 | INFO     | 
[2025-05-24 19:42:49] 2025-05-24 23:42:35,774 | INFO     | architecture information:
[2025-05-24 19:42:49] 2025-05-24 23:42:35,794 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:42:49] 2025-05-24 23:42:35,825 | INFO     | cat /etc/os-release:
[2025-05-24 19:42:49] NAME="CentOS Linux"
[2025-05-24 19:42:49] VERSION="7 (Core)"
[2025-05-24 19:42:49] ID="centos"
[2025-05-24 19:42:49] ID_LIKE="rhel fedora"
[2025-05-24 19:42:49] VERSION_ID="7"
[2025-05-24 19:42:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:42:49] ANSI_COLOR="0;31"
[2025-05-24 19:42:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:42:49] HOME_URL="https://www.centos.org/"
[2025-05-24 19:42:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:42:49] 
[2025-05-24 19:42:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:42:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:42:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:42:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:42:49] 
[2025-05-24 19:42:49] 2025-05-24 23:42:35,825 | INFO     | **************************************
[2025-05-24 19:42:49] 2025-05-24 23:42:36,329 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-24 19:42:49] 2025-05-24 23:42:36,390 | INFO     | sufficient remaining disk space (169696296960 B)
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | INFO     | update_server=False
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:42:49] 2025-05-24 23:42:36,394 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 19:42:49] 2025-05-24 23:42:36,395 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:42:49] 2025-05-24 23:42:36,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:42:49] 2025-05-24 23:42:36,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:42:49] 2025-05-24 23:42:36,622 | INFO     | all data control threads have been joined
[2025-05-24 19:42:49] 2025-05-24 23:42:36,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 19:42:49] 2025-05-24 23:42:36,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 19:42:49] 2025-05-24 23:42:36,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:42:49] 2025-05-24 23:42:36,720 | INFO     | will abort loop
[2025-05-24 19:42:49] 2025-05-24 23:42:36,720 | INFO     | all payload control threads have been joined
[2025-05-24 19:42:49] 2025-05-24 23:42:37,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:42:49] 2025-05-24 23:42:37,053 | INFO     | all job control threads have been joined
[2025-05-24 19:42:49] 2025-05-24 23:42:37,400 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:37,400 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:37,643 | INFO     | [data] control thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:37,726 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:37,726 | INFO     | [payload] control thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:37,884 | INFO     | [job] validate thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,059 | INFO     | [job] control thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,076 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,217 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,289 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,401 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,609 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,629 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:38,805 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:41,033 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:42:49] 2025-05-24 23:42:41,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718892795712)>', '<ExcThread(monitor, started 140718379079424)>']
[2025-05-24 19:42:49] 2025-05-24 23:42:41,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:42:49] 2025-05-24 23:42:41,453 | INFO     | [monitor] control thread has ended
[2025-05-24 19:42:49] 2025-05-24 23:42:46,467 | INFO     | all workflow threads have been joined
[2025-05-24 19:42:49] 2025-05-24 23:42:46,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:42:49] 2025-05-24 23:42:46,467 | INFO     | traces error code: 0
[2025-05-24 19:42:49] 2025-05-24 23:42:46,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:42:49] 2025-05-24 23:42:48,157 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:42:49] 2025-05-24 23:42:48,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:42:49] 2025-05-24 23:42:48,225 [wrapper] pilotpid: 1584094
[2025-05-24 19:42:49] 2025-05-24 23:42:48,271 [wrapper] Pilot exit status: 0
[2025-05-24 19:42:49] 2025-05-24 23:42:48,435 [wrapper] pandaids: 6665630660
[2025-05-24 19:42:49] 2025-05-24 23:42:48,954 [wrapper] cleanup supervisor_pilot 2723933 1584106
[2025-05-24 19:42:49] 2025-05-24 23:42:48,980 [wrapper] Test setup, not cleaning
[2025-05-24 19:42:49] 2025-05-24 23:42:49,000 [wrapper] apfmon messages muted
[2025-05-24 19:42:49] 2025-05-24 23:42:49,015 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:42:49] 2025-05-24 23:42:49,040 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:42:49]  *** Error codes and diagnostics ***
[2025-05-24 19:42:49]     "exeErrorCode": 0,
[2025-05-24 19:42:49]     "exeErrorDiag": "",
[2025-05-24 19:42:49]     "pilotErrorCode": 0,
[2025-05-24 19:42:49]     "pilotErrorDiag": "",
[2025-05-24 19:42:49]  *** Listing of results directory ***
[2025-05-24 19:42:49] total 424152
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas    495897 May 24 10:30 pilot3.tar.gz
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas      5111 May 24 10:49 queuedata.json
[2025-05-24 19:42:49] -rwx------. 1 boincer umatlas     37140 May 24 10:50 runpilot2-wrapper.sh
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas       100 May 24 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:42:49] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 16:15 run_atlas
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas       105 May 24 16:15 job.xml
[2025-05-24 19:42:49] -rw-r--r--. 2 boincer umatlas 226350440 May 24 16:15 EVNT.44871834._000762.pool.root.1
[2025-05-24 19:42:49] -rw-r--r--. 2 boincer umatlas     15093 May 24 16:15 start_atlas.sh
[2025-05-24 19:42:49] drwxrwx--x. 2 boincer umatlas      4096 May 24 16:15 shared
[2025-05-24 19:42:49] -rw-r--r--. 2 boincer umatlas    508878 May 24 16:15 input.tar.gz
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas         0 May 24 16:15 boinc_lockfile
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas      2558 May 24 16:15 pandaJob.out
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas    988564 May 24 16:17 agis_schedconf.cvmfs.json
[2025-05-24 19:42:49] drwx------. 4 boincer umatlas      4096 May 24 16:17 pilot3
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas      7160 May 24 19:36 init_data.xml
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas 201666701 May 24 19:39 HITS.44871837._019102.pool.root.1
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas       530 May 24 19:40 boinc_task_state.xml
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas      1037 May 24 19:41 memory_monitor_summary.json
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas   1596740 May 24 19:41 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas    354379 May 24 19:41 log.44871837._019102.job.log.tgz.1
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas        95 May 24 19:42 pilot_heartbeat.json
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas      7695 May 24 19:42 heartbeat.json
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas      4663 May 24 19:42 pilotlog.txt
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas      8192 May 24 19:42 boinc_mmap_file
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas    880752 May 24 19:42 log.44871837._019102.job.log.1
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas        28 May 24 19:42 wrapper_checkpoint.txt
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas       357 May 24 19:42 output.list
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas       620 May 24 19:42 runtime_log
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas   1259520 May 24 19:42 result.tar.gz
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas      8650 May 24 19:42 runtime_log.err
[2025-05-24 19:42:49] -rw-------. 1 boincer umatlas       653 May 24 19:42 gOzKDmuN5c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUkRKDmKRz66n.diag
[2025-05-24 19:42:49] -rw-r--r--. 1 boincer umatlas     21211 May 24 19:42 stderr.txt
[2025-05-24 19:42:50] HITS file was successfully produced:
[2025-05-24 19:42:50] -rw-------. 1 boincer umatlas 201666701 May 24 19:39 shared/HITS.pool.root.1
[2025-05-24 19:42:50]  *** Contents of shared directory: ***
[2025-05-24 19:42:50] total 419748
[2025-05-24 19:42:50] -rw-r--r--. 2 boincer umatlas 226350440 May 24 16:15 ATLAS.root_0
[2025-05-24 19:42:50] -rw-r--r--. 2 boincer umatlas     15093 May 24 16:15 start_atlas.sh
[2025-05-24 19:42:50] -rw-r--r--. 2 boincer umatlas    508878 May 24 16:15 input.tar.gz
[2025-05-24 19:42:50] -rw-------. 1 boincer umatlas 201666701 May 24 19:39 HITS.pool.root.1
[2025-05-24 19:42:50] -rw-------. 1 boincer umatlas   1259520 May 24 19:42 result.tar.gz
19:42:51 (1523891): run_atlas exited; CPU time 29666.186017
19:42:51 (1523891): called boinc_finish(0)

</stderr_txt>
]]>

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