Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:00:43 (1788353): wrapper (7.7.26015): starting
16:00:43 (1788353): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 16:00:43] Arguments: --nthreads 8
[2025-05-24 16:00:43] Threads: 8
[2025-05-24 16:00:43] Checking for CVMFS
[2025-05-24 16:00:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 16:00:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 16:00:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 16:00:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 16:00:45] 2.12.6.0 199032 129834 931008 146377 2 605 30178536 32935936 29506 130560 0 598939337 99.682 497377197 20486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 16:00:45] CVMFS is ok
[2025-05-24 16:00:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 16:00:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 16:00:45] Further information can be found at the LHC@home message board.
[2025-05-24 16:00:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:00:45] Checking for apptainer binary...
[2025-05-24 16:00:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 16:00:45] Running /usr/bin/apptainer --version
[2025-05-24 16:00:45] apptainer version 1.4.1-1.el9
[2025-05-24 16:00:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:00:45] lc-10-9.aglt2.org
[2025-05-24 16:00:45] apptainer works
[2025-05-24 16:00:45] Set ATHENA_PROC_NUMBER=8
[2025-05-24 16:00:45] Set ATHENA_CORE_NUMBER=8
[2025-05-24 16:00:45] Starting ATLAS job with PandaID=6665381894
[2025-05-24 16:00:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 05:25:42]  *** The last 200 lines of the pilot log: ***
[2025-05-25 05:25:42] 2025-05-25 09:25:20,393 | INFO     | extracted standard info from prmon json
[2025-05-25 05:25:42] 2025-05-25 09:25:20,393 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 05:25:42] 2025-05-25 09:25:20,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 05:25:42] 2025-05-25 09:25:20,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 05:25:42] 2025-05-25 09:25:20,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 05:25:42] 2025-05-25 09:25:20,496 | INFO     | monitor loop #2243: job 0:6665381894 is in state 'finished'
[2025-05-25 05:25:42] 2025-05-25 09:25:20,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 05:25:42] 2025-05-25 09:25:20,506 | INFO     | fitting pss+swap vs Time
[2025-05-25 05:25:42] 2025-05-25 09:25:20,521 | INFO     | sum of square deviations: 150567725870.69708
[2025-05-25 05:25:42] 2025-05-25 09:25:20,599 | INFO     | sum of deviations: 469077985930.2163
[2025-05-25 05:25:42] 2025-05-25 09:25:20,600 | INFO     | mean x: 1748141072.292621
[2025-05-25 05:25:42] 2025-05-25 09:25:20,600 | INFO     | mean y: 2053436.9338422392
[2025-05-25 05:25:42] 2025-05-25 09:25:20,600 | INFO     | -- intersect: -5444097048.311013
[2025-05-25 05:25:42] 2025-05-25 09:25:20,600 | INFO     | intersect: -5444097048.311013
[2025-05-25 05:25:42] 2025-05-25 09:25:20,623 | INFO     | chi2: 10.649858726611779
[2025-05-25 05:25:42] 2025-05-25 09:25:20,624 | INFO     | sum of square deviations: 147712634440.03592
[2025-05-25 05:25:42] 2025-05-25 09:25:20,708 | INFO     | sum of deviations: 601113980118.6575
[2025-05-25 05:25:42] 2025-05-25 09:25:20,708 | INFO     | mean x: 1748140919.7976952
[2025-05-25 05:25:42] 2025-05-25 09:25:20,708 | INFO     | mean y: 2060480.1434058899
[2025-05-25 05:25:42] 2025-05-25 09:25:20,708 | INFO     | -- intersect: -7111968391.465878
[2025-05-25 05:25:42] 2025-05-25 09:25:20,708 | INFO     | intersect: -7111968391.465878
[2025-05-25 05:25:42] 2025-05-25 09:25:20,731 | INFO     | chi2: 8.764015141954072
[2025-05-25 05:25:42] 2025-05-25 09:25:20,732 | INFO     | current chi2=8.764015141954072 (change=17.70768639348592 %)
[2025-05-25 05:25:42] 2025-05-25 09:25:20,732 | INFO     | right removable region: 780
[2025-05-25 05:25:42] 2025-05-25 09:25:20,733 | INFO     | sum of square deviations: 147712254410.03558
[2025-05-25 05:25:42] 2025-05-25 09:25:20,793 | INFO     | sum of deviations: 245258950899.65314
[2025-05-25 05:25:42] 2025-05-25 09:25:20,793 | INFO     | mean x: 1748141224.7976952
[2025-05-25 05:25:42] 2025-05-25 09:25:20,793 | INFO     | mean y: 2065387.0294494238
[2025-05-25 05:25:42] 2025-05-25 09:25:20,794 | INFO     | -- intersect: -2900518995.9030223
[2025-05-25 05:25:42] 2025-05-25 09:25:20,794 | INFO     | intersect: -2900518995.9030223
[2025-05-25 05:25:42] 2025-05-25 09:25:20,795 | INFO     | chi2: 6.333351355731589
[2025-05-25 05:25:42] 2025-05-25 09:25:20,795 | INFO     | current chi2=6.333351355731589 (change=40.53112329174976 %)
[2025-05-25 05:25:42] 2025-05-25 09:25:20,796 | INFO     | sum of square deviations: 144893109211.83344
[2025-05-25 05:25:42] 2025-05-25 09:25:20,808 | INFO     | sum of deviations: 89459862892.99835
[2025-05-25 05:25:42] 2025-05-25 09:25:20,809 | INFO     | mean x: 1748141377.302835
[2025-05-25 05:25:42] 2025-05-25 09:25:20,809 | INFO     | mean y: 2073813.5914948455
[2025-05-25 05:25:42] 2025-05-25 09:25:20,809 | INFO     | -- intersect: -1077263145.7834969
[2025-05-25 05:25:42] 2025-05-25 09:25:20,809 | INFO     | intersect: -1077263145.7834969
[2025-05-25 05:25:42] 2025-05-25 09:25:20,810 | INFO     | chi2: 4.315588505931825
[2025-05-25 05:25:42] 2025-05-25 09:25:20,810 | INFO     | current chi2=4.315588505931825 (change=31.85932275766949 %)
[2025-05-25 05:25:42] 2025-05-25 09:25:20,811 | INFO     | sum of square deviations: 142110104928.2044
[2025-05-25 05:25:42] 2025-05-25 09:25:20,829 | INFO     | sum of deviations: -11749239962.987099
[2025-05-25 05:25:42] 2025-05-25 09:25:20,829 | INFO     | mean x: 1748141529.8067446
[2025-05-25 05:25:42] 2025-05-25 09:25:20,829 | INFO     | mean y: 2079359.2282749675
[2025-05-25 05:25:42] 2025-05-25 09:25:20,829 | INFO     | -- intersect: 146610491.15122658
[2025-05-25 05:25:42] 2025-05-25 09:25:20,830 | INFO     | intersect: 146610491.15122658
[2025-05-25 05:25:42] 2025-05-25 09:25:20,831 | INFO     | chi2: 3.474812893666601
[2025-05-25 05:25:42] 2025-05-25 09:25:20,856 | INFO     | current chi2=3.474812893666601 (change=19.482293344455073 %)
[2025-05-25 05:25:42] 2025-05-25 09:25:20,856 | INFO     | left removable region: 30
[2025-05-25 05:25:42] 2025-05-25 09:25:20,857 | INFO     | sum of square deviations: 130811013028.83858
[2025-05-25 05:25:42] 2025-05-25 09:25:20,889 | INFO     | sum of deviations: 29525121189.570698
[2025-05-25 05:25:42] 2025-05-25 09:25:20,889 | INFO     | mean x: 1748141804.3186667
[2025-05-25 05:25:42] 2025-05-25 09:25:20,889 | INFO     | mean y: 2094131.9306666667
[2025-05-25 05:25:42] 2025-05-25 09:25:20,890 | INFO     | -- intersect: -392475846.8041099
[2025-05-25 05:25:42] 2025-05-25 09:25:20,890 | INFO     | intersect: -392475846.8041099
[2025-05-25 05:25:42] 2025-05-25 09:25:20,890 | INFO     | chi2: 0.9259457240145823
[2025-05-25 05:25:42] 2025-05-25 09:25:20,891 | INFO     | -- intersect: -392475846.8041099
[2025-05-25 05:25:42] 2025-05-25 09:25:20,891 | INFO     | current memory leak: 0.23 B/s (using 750 data points, chi2=0.93)
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | ..............................
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . Timing measurements:
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . get job = 1 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . initial setup = 9 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . payload setup = 66 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . stage-in = 0 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . payload execution = 47942 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . stage-out = 43 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | . log creation = 1 s
[2025-05-25 05:25:42] 2025-05-25 09:25:20,892 | INFO     | ..............................
[2025-05-25 05:25:42] 2025-05-25 09:25:21,587 | INFO     | 
[2025-05-25 05:25:42] 2025-05-25 09:25:21,589 | INFO     | job summary report
[2025-05-25 05:25:42] 2025-05-25 09:25:21,589 | INFO     | --------------------------------------------------
[2025-05-25 05:25:42] 2025-05-25 09:25:21,589 | INFO     | PanDA job id: 6665381894
[2025-05-25 05:25:42] 2025-05-25 09:25:21,589 | INFO     | task id: 44871837
[2025-05-25 05:25:42] 2025-05-25 09:25:21,589 | INFO     | errors: (none)
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | pilot state: finished 
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | transexitcode: 0
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | exeerrorcode: 0
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | exeerrordiag: 
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | exitcode: 0
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | exitmsg: OK
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | cpuconsumptiontime: 53053 s
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | nevents: 400
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | neventsw: 0
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | pid: 1889478
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | pgrp: 1889478
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | corecount: 8
[2025-05-25 05:25:42] 2025-05-25 09:25:21,590 | INFO     | event service: False
[2025-05-25 05:25:42] 2025-05-25 09:25:21,591 | INFO     | sizes: {0: 2393512, 1: 2393596, 2: 2393596, 3: 2393767, 4: 2393795, 5: 2393823, 17: 2394007, 28: 2394035, 39: 2394063, 43: 2394297, 52: 2394325, 48012: 2433822, 48
[2025-05-25 05:25:42] 2025-05-25 09:25:21,591 | INFO     | --------------------------------------------------
[2025-05-25 05:25:42] 2025-05-25 09:25:21,611 | INFO     | 
[2025-05-25 05:25:42] 2025-05-25 09:25:21,611 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-05-25 05:25:42] 2025-05-25 09:25:21,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 05:25:42] 2025-05-25 09:25:21,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 05:25:42] 2025-05-25 09:25:21,834 | INFO     | job 6665381894 has completed (purged errors)
[2025-05-25 05:25:42] 2025-05-25 09:25:21,835 | INFO     | overall cleanup function is called
[2025-05-25 05:25:42] 2025-05-25 09:25:22,855 | INFO     | --- collectZombieJob: --- 10, [1889478]
[2025-05-25 05:25:42] 2025-05-25 09:25:22,855 | INFO     | zombie collector waiting for pid 1889478
[2025-05-25 05:25:42] 2025-05-25 09:25:22,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 05:25:42] 2025-05-25 09:25:22,855 | INFO     | collected zombie processes
[2025-05-25 05:25:42] 2025-05-25 09:25:22,855 | INFO     | will attempt to kill all subprocesses of pid=1889478
[2025-05-25 05:25:42] 2025-05-25 09:25:25,116 | INFO     | process IDs to be killed: [1889478] (in reverse order)
[2025-05-25 05:25:42] 2025-05-25 09:25:26,690 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 05:25:42] 2025-05-25 09:25:26,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 05:25:42] 2025-05-25 09:25:26,765 | INFO     | did not find any defunct processes belonging to 1889478
[2025-05-25 05:25:42] 2025-05-25 09:25:26,829 | INFO     | did not find any defunct processes belonging to 1889478
[2025-05-25 05:25:42] 2025-05-25 09:25:26,829 | INFO     | ready for new job
[2025-05-25 05:25:42] 2025-05-25 09:25:26,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 05:25:42] 2025-05-25 09:25:26,842 | INFO     | **************************************
[2025-05-25 05:25:42] 2025-05-25 09:25:26,842 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 05:25:42] 2025-05-25 09:25:26,842 | INFO     | **************************************
[2025-05-25 05:25:42] 2025-05-25 09:25:26,842 | INFO     | 
[2025-05-25 05:25:42] 2025-05-25 09:25:26,851 | INFO     | architecture information:
[2025-05-25 05:25:42] 2025-05-25 09:25:26,860 | INFO     | executing command: cat /etc/os-release
[2025-05-25 05:25:42] 2025-05-25 09:25:26,949 | INFO     | cat /etc/os-release:
[2025-05-25 05:25:42] NAME="CentOS Linux"
[2025-05-25 05:25:42] VERSION="7 (Core)"
[2025-05-25 05:25:42] ID="centos"
[2025-05-25 05:25:42] ID_LIKE="rhel fedora"
[2025-05-25 05:25:42] VERSION_ID="7"
[2025-05-25 05:25:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 05:25:42] ANSI_COLOR="0;31"
[2025-05-25 05:25:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 05:25:42] HOME_URL="https://www.centos.org/"
[2025-05-25 05:25:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 05:25:42] 
[2025-05-25 05:25:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 05:25:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 05:25:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 05:25:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 05:25:42] 
[2025-05-25 05:25:42] 2025-05-25 09:25:26,953 | INFO     | **************************************
[2025-05-25 05:25:42] 2025-05-25 09:25:27,458 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-05-25 05:25:42] 2025-05-25 09:25:27,530 | INFO     | sufficient remaining disk space (93597990912 B)
[2025-05-25 05:25:42] 2025-05-25 09:25:27,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 05:25:42] 2025-05-25 09:25:27,536 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 05:25:42] 2025-05-25 09:25:27,537 | INFO     | update_server=False
[2025-05-25 05:25:42] 2025-05-25 09:25:27,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 05:25:42] 2025-05-25 09:25:27,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 05:25:42] 2025-05-25 09:25:27,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:25:42] 2025-05-25 09:25:27,546 | INFO     | aborting loop
[2025-05-25 05:25:42] 2025-05-25 09:25:27,682 | INFO     | all data control threads have been joined
[2025-05-25 05:25:42] 2025-05-25 09:25:27,995 | INFO     | all job control threads have been joined
[2025-05-25 05:25:42] 2025-05-25 09:25:28,169 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 05:25:42] 2025-05-25 09:25:28,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 05:25:42] 2025-05-25 09:25:28,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 05:25:42] 2025-05-25 09:25:28,544 | INFO     | [job] retrieve thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:28,552 | INFO     | [job] job monitor thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:28,688 | INFO     | [data] control thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:28,807 | INFO     | all payload control threads have been joined
[2025-05-25 05:25:42] 2025-05-25 09:25:29,001 | INFO     | [job] control thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,219 | INFO     | [data] copytool_in thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,220 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,227 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,370 | INFO     | [payload] failed_post thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,550 | INFO     | [data] copytool_out thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 05:25:42] 2025-05-25 09:25:29,656 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,693 | INFO     | [payload] validate_post thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,728 | INFO     | [job] validate thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:29,813 | INFO     | [payload] control thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:30,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 05:25:42] 2025-05-25 09:25:31,295 | INFO     | [job] queue monitor thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:33,562 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 05:25:42] 2025-05-25 09:25:35,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234524821312)>', '<ExcThread(monitor, started 140233878259456)>']
[2025-05-25 05:25:42] 2025-05-25 09:25:35,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 05:25:42] 2025-05-25 09:25:35,212 | INFO     | [monitor] control thread has ended
[2025-05-25 05:25:42] 2025-05-25 09:25:40,067 | INFO     | all workflow threads have been joined
[2025-05-25 05:25:42] 2025-05-25 09:25:40,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 05:25:42] 2025-05-25 09:25:40,067 | INFO     | traces error code: 0
[2025-05-25 05:25:42] 2025-05-25 09:25:40,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 05:25:42] 2025-05-25 09:25:41,192 [wrapper] ==== pilot stdout END ====
[2025-05-25 05:25:42] 2025-05-25 09:25:41,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 05:25:42] 2025-05-25 09:25:41,212 [wrapper] pilotpid: 1817673
[2025-05-25 05:25:42] 2025-05-25 09:25:41,249 [wrapper] Pilot exit status: 0
[2025-05-25 05:25:42] 2025-05-25 09:25:41,388 [wrapper] pandaids: 6665381894
[2025-05-25 05:25:42] 2025-05-25 09:25:41,824 [wrapper] cleanup supervisor_pilot  974096 1817674
[2025-05-25 05:25:42] 2025-05-25 09:25:41,850 [wrapper] Test setup, not cleaning
[2025-05-25 05:25:42] 2025-05-25 09:25:41,853 [wrapper] apfmon messages muted
[2025-05-25 05:25:42] 2025-05-25 09:25:41,855 [wrapper] ==== wrapper stdout END ====
[2025-05-25 05:25:42] 2025-05-25 09:25:41,857 [wrapper] ==== wrapper stderr END ====
[2025-05-25 05:25:42]  *** Error codes and diagnostics ***
[2025-05-25 05:25:42]     "exeErrorCode": 0,
[2025-05-25 05:25:42]     "exeErrorDiag": "",
[2025-05-25 05:25:42]     "pilotErrorCode": 0,
[2025-05-25 05:25:42]     "pilotErrorDiag": "",
[2025-05-25 05:25:42]  *** Listing of results directory ***
[2025-05-25 05:25:42] total 417412
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas    495897 May 24 07:25 pilot3.tar.gz
[2025-05-25 05:25:42] -rwx------. 1 boincer umatlas     37140 May 24 07:33 runpilot2-wrapper.sh
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas      5111 May 24 07:33 queuedata.json
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas       100 May 24 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 05:25:42] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 16:00 run_atlas
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas       105 May 24 16:00 job.xml
[2025-05-25 05:25:42] -rw-r--r--. 2 boincer umatlas 223710235 May 24 16:00 EVNT.44871834._000656.pool.root.1
[2025-05-25 05:25:42] drwxrwx--x. 2 boincer umatlas      4096 May 24 16:00 shared
[2025-05-25 05:25:42] -rw-r--r--. 2 boincer umatlas    508873 May 24 16:00 input.tar.gz
[2025-05-25 05:25:42] -rw-r--r--. 2 boincer umatlas     15093 May 24 16:00 start_atlas.sh
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas         0 May 24 16:00 boinc_lockfile
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas      2558 May 24 16:00 pandaJob.out
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas    988564 May 24 16:02 agis_schedconf.cvmfs.json
[2025-05-25 05:25:42] drwx------. 4 boincer umatlas      4096 May 24 16:02 pilot3
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas 192140806 May 25 05:21 HITS.44871837._016384.pool.root.1
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas       531 May 25 05:21 boinc_task_state.xml
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas      6865 May 25 05:22 init_data.xml
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas      1042 May 25 05:23 memory_monitor_summary.json
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas   1596740 May 25 05:23 agis_ddmendpoints.agis.ALL.json
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas    632879 May 25 05:24 log.44871837._016384.job.log.tgz.1
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas        95 May 25 05:25 pilot_heartbeat.json
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas      6108 May 25 05:25 heartbeat.json
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas      4353 May 25 05:25 pilotlog.txt
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas      8192 May 25 05:25 boinc_mmap_file
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas        28 May 25 05:25 wrapper_checkpoint.txt
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas   3243702 May 25 05:25 log.44871837._016384.job.log.1
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas       357 May 25 05:25 output.list
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas       620 May 25 05:25 runtime_log
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas   3891200 May 25 05:25 result.tar.gz
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas      8655 May 25 05:25 runtime_log.err
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas       658 May 25 05:25 ebSMDmeJ2c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkeMKDmDSn5Wo.diag
[2025-05-25 05:25:42] -rw-r--r--. 1 boincer umatlas     20947 May 25 05:25 stderr.txt
[2025-05-25 05:25:42] HITS file was successfully produced:
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas 192140806 May 25 05:21 shared/HITS.pool.root.1
[2025-05-25 05:25:42]  *** Contents of shared directory: ***
[2025-05-25 05:25:42] total 410432
[2025-05-25 05:25:42] -rw-r--r--. 2 boincer umatlas 223710235 May 24 16:00 ATLAS.root_0
[2025-05-25 05:25:42] -rw-r--r--. 2 boincer umatlas    508873 May 24 16:00 input.tar.gz
[2025-05-25 05:25:42] -rw-r--r--. 2 boincer umatlas     15093 May 24 16:00 start_atlas.sh
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas 192140806 May 25 05:21 HITS.pool.root.1
[2025-05-25 05:25:42] -rw-------. 1 boincer umatlas   3891200 May 25 05:25 result.tar.gz
05:25:44 (1788353): run_atlas exited; CPU time 56183.586747
05:25:44 (1788353): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN