Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:28:20 (5837): wrapper (7.7.26015): starting
03:28:20 (5837): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 03:28:20] Arguments: --nthreads 8
[2025-05-25 03:28:20] Threads: 8
[2025-05-25 03:28:20] Checking for CVMFS
[2025-05-25 03:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 03:28:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 03:28:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 03:28:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 03:28:22] 2.11.2.0 3140 18170 91492 146385 2 59 21451456 25165825 2374 130560 0 9784218 99.776 12929596 2010 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 03:28:22] CVMFS is ok
[2025-05-25 03:28:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 03:28:22] Checking for apptainer binary...
[2025-05-25 03:28:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 03:28:22] Running /usr/bin/apptainer --version
[2025-05-25 03:28:22] apptainer version 1.3.2-1.el7
[2025-05-25 03:28:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 03:58:58] cg-vwn243.simple-grid.lan
[2025-05-25 03:58:58] apptainer works
[2025-05-25 03:58:58] Set ATHENA_PROC_NUMBER=8
[2025-05-25 03:58:58] Set ATHENA_CORE_NUMBER=8
[2025-05-25 03:58:58] Starting ATLAS job with PandaID=6665439780
[2025-05-25 03:58:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 09:36:17]  *** The last 200 lines of the pilot log: ***
[2025-05-25 09:36:17] 2025-05-25 07:18:23,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 09:36:17] 2025-05-25 07:18:26,187 | INFO     | monitor loop #1359: job 0:6665439780 is in state 'finished'
[2025-05-25 09:36:17] 2025-05-25 07:18:26,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 09:36:17] 2025-05-25 07:18:28,693 | INFO     | monitor loop #1360: job 0:6665439780 is in state 'finished'
[2025-05-25 09:36:17] 2025-05-25 07:18:28,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,206 | INFO     | monitor loop #1361: job 0:6665439780 is in state 'finished'
[2025-05-25 09:36:17] 2025-05-25 07:18:31,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,580 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 09:36:17] 2025-05-25 07:18:31,581 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6665439780/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,582 | INFO     | extracted standard info from prmon json
[2025-05-25 09:36:17] 2025-05-25 07:18:31,582 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 09:36:17] 2025-05-25 07:18:31,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 09:36:17] 2025-05-25 07:18:31,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 09:36:17] 2025-05-25 07:18:31,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 09:36:17] 2025-05-25 07:18:31,588 | INFO     | fitting pss+swap vs Time
[2025-05-25 09:36:17] 2025-05-25 07:18:31,589 | INFO     | sum of square deviations: 8625843592.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,592 | INFO     | sum of deviations: 113765243146.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,592 | INFO     | mean x: 1748148199.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,592 | INFO     | mean y: 2454952.3729372937
[2025-05-25 09:36:17] 2025-05-25 07:18:31,593 | INFO     | -- intersect: -23053667361.150806
[2025-05-25 09:36:17] 2025-05-25 07:18:31,593 | INFO     | intersect: -23053667361.150806
[2025-05-25 09:36:17] 2025-05-25 07:18:31,593 | INFO     | chi2: 5.2084932161352775
[2025-05-25 09:36:17] 2025-05-25 07:18:31,600 | INFO     | sum of square deviations: 8205826414.5
[2025-05-25 09:36:17] 2025-05-25 07:18:31,603 | INFO     | sum of deviations: 131734368532.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,603 | INFO     | mean x: 1748148046.5
[2025-05-25 09:36:17] 2025-05-25 07:18:31,603 | INFO     | mean y: 2461378.9597315434
[2025-05-25 09:36:17] 2025-05-25 07:18:31,603 | INFO     | -- intersect: -28061887947.171978
[2025-05-25 09:36:17] 2025-05-25 07:18:31,603 | INFO     | intersect: -28061887947.171978
[2025-05-25 09:36:17] 2025-05-25 07:18:31,604 | INFO     | chi2: 4.463860187311994
[2025-05-25 09:36:17] 2025-05-25 07:18:31,604 | INFO     | current chi2=4.463860187311994 (change=14.296515286158023 %)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,604 | INFO     | right removable region: 297
[2025-05-25 09:36:17] 2025-05-25 07:18:31,605 | INFO     | sum of square deviations: 8205826414.5
[2025-05-25 09:36:17] 2025-05-25 07:18:31,608 | INFO     | sum of deviations: 13937356860.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,608 | INFO     | mean x: 1748148351.5
[2025-05-25 09:36:17] 2025-05-25 07:18:31,608 | INFO     | mean y: 2491148.953020134
[2025-05-25 09:36:17] 2025-05-25 07:18:31,608 | INFO     | -- intersect: -2966687845.1362433
[2025-05-25 09:36:17] 2025-05-25 07:18:31,608 | INFO     | intersect: -2966687845.1362433
[2025-05-25 09:36:17] 2025-05-25 07:18:31,609 | INFO     | chi2: 1.0485020630463546
[2025-05-25 09:36:17] 2025-05-25 07:18:31,609 | INFO     | current chi2=1.0485020630463546 (change=79.86937834922732 %)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,609 | INFO     | sum of square deviations: 7799669962.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,612 | INFO     | sum of deviations: -4909289211.000004
[2025-05-25 09:36:17] 2025-05-25 07:18:31,612 | INFO     | mean x: 1748148504.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,612 | INFO     | mean y: 2498167.7576791807
[2025-05-25 09:36:17] 2025-05-25 07:18:31,612 | INFO     | -- intersect: 1102822493.2387984
[2025-05-25 09:36:17] 2025-05-25 07:18:31,612 | INFO     | intersect: 1102822493.2387984
[2025-05-25 09:36:17] 2025-05-25 07:18:31,613 | INFO     | chi2: 0.7958444123661829
[2025-05-25 09:36:17] 2025-05-25 07:18:31,613 | INFO     | current chi2=0.7958444123661829 (change=24.097010352663624 %)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,613 | INFO     | left removable region: 20
[2025-05-25 09:36:17] 2025-05-25 07:18:31,614 | INFO     | sum of square deviations: 6590404498.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,616 | INFO     | sum of deviations: 7390718580.999999
[2025-05-25 09:36:17] 2025-05-25 07:18:31,616 | INFO     | mean x: 1748148626.0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,616 | INFO     | mean y: 2508387.0649819495
[2025-05-25 09:36:17] 2025-05-25 07:18:31,616 | INFO     | -- intersect: -1957928872.3549356
[2025-05-25 09:36:17] 2025-05-25 07:18:31,617 | INFO     | intersect: -1957928872.3549356
[2025-05-25 09:36:17] 2025-05-25 07:18:31,617 | INFO     | chi2: 0.0025610037809915337
[2025-05-25 09:36:17] 2025-05-25 07:18:31,617 | INFO     | -- intersect: -1957928872.3549356
[2025-05-25 09:36:17] 2025-05-25 07:18:31,617 | INFO     | current memory leak: 1.12 B/s (using 277 data points, chi2=0.00)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,618 | INFO     | ..............................
[2025-05-25 09:36:17] 2025-05-25 07:18:31,618 | INFO     | . Timing measurements:
[2025-05-25 09:36:17] 2025-05-25 07:18:31,618 | INFO     | . get job = 0 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | . initial setup = 11 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | . payload setup = 129 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | . stage-in = 0 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | . payload execution = 18581 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | . stage-out = 4 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | . log creation = 1 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,619 | INFO     | ..............................
[2025-05-25 09:36:17] 2025-05-25 07:18:31,903 | INFO     | 
[2025-05-25 09:36:17] 2025-05-25 07:18:31,903 | INFO     | job summary report
[2025-05-25 09:36:17] 2025-05-25 07:18:31,903 | INFO     | --------------------------------------------------
[2025-05-25 09:36:17] 2025-05-25 07:18:31,903 | INFO     | PanDA job id: 6665439780
[2025-05-25 09:36:17] 2025-05-25 07:18:31,903 | INFO     | task id: 44871837
[2025-05-25 09:36:17] 2025-05-25 07:18:31,903 | INFO     | errors: (none)
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | pilot state: finished 
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | transexitcode: 0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | exeerrorcode: 0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | exeerrordiag: 
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | exitcode: 0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | exitmsg: OK
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | cpuconsumptiontime: 70123 s
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | nevents: 400
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | neventsw: 0
[2025-05-25 09:36:17] 2025-05-25 07:18:31,904 | INFO     | pid: 4265
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | pgrp: 4265
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | corecount: 8
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | event service: False
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | sizes: {0: 2392911, 1: 2393596, 2: 2393795, 13: 2393795, 23: 2393851, 34: 2393879, 45: 2394035, 56: 2394063, 66: 2394091, 77: 2394119, 82: 2394381, 88: 2394717, 18
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | --------------------------------------------------
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | 
[2025-05-25 09:36:17] 2025-05-25 07:18:31,905 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 09:36:17] 2025-05-25 07:18:32,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 09:36:17] 2025-05-25 07:18:32,325 | INFO     | job 6665439780 has completed (purged errors)
[2025-05-25 09:36:17] 2025-05-25 07:18:32,325 | INFO     | overall cleanup function is called
[2025-05-25 09:36:17] 2025-05-25 07:18:33,334 | INFO     | --- collectZombieJob: --- 10, [4265]
[2025-05-25 09:36:17] 2025-05-25 07:18:33,334 | INFO     | zombie collector waiting for pid 4265
[2025-05-25 09:36:17] 2025-05-25 07:18:33,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 09:36:17] 2025-05-25 07:18:33,334 | INFO     | collected zombie processes
[2025-05-25 09:36:17] 2025-05-25 07:18:33,334 | INFO     | will attempt to kill all subprocesses of pid=4265
[2025-05-25 09:36:17] 2025-05-25 07:18:33,475 | INFO     | process IDs to be killed: [4265] (in reverse order)
[2025-05-25 09:36:17] 2025-05-25 07:18:34,198 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 09:36:17] 2025-05-25 07:18:34,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 09:36:17] 2025-05-25 07:18:34,202 | INFO     | did not find any defunct processes belonging to 4265
[2025-05-25 09:36:17] 2025-05-25 07:18:34,205 | INFO     | did not find any defunct processes belonging to 4265
[2025-05-25 09:36:17] 2025-05-25 07:18:34,205 | INFO     | ready for new job
[2025-05-25 09:36:17] 2025-05-25 07:18:34,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 09:36:17] 2025-05-25 07:18:34,207 | INFO     | **************************************
[2025-05-25 09:36:17] 2025-05-25 07:18:34,207 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 09:36:17] 2025-05-25 07:18:34,207 | INFO     | **************************************
[2025-05-25 09:36:17] 2025-05-25 07:18:34,207 | INFO     | 
[2025-05-25 09:36:17] 2025-05-25 07:18:34,208 | INFO     | pilot is running in a VM
[2025-05-25 09:36:17] 2025-05-25 07:18:34,208 | INFO     | architecture information:
[2025-05-25 09:36:17] 2025-05-25 07:18:34,222 | INFO     | executing command: cat /etc/os-release
[2025-05-25 09:36:17] 2025-05-25 07:18:34,565 | INFO     | cat /etc/os-release:
[2025-05-25 09:36:17] NAME="CentOS Linux"
[2025-05-25 09:36:17] VERSION="7 (Core)"
[2025-05-25 09:36:17] ID="centos"
[2025-05-25 09:36:17] ID_LIKE="rhel fedora"
[2025-05-25 09:36:17] VERSION_ID="7"
[2025-05-25 09:36:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 09:36:17] ANSI_COLOR="0;31"
[2025-05-25 09:36:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 09:36:17] HOME_URL="https://www.centos.org/"
[2025-05-25 09:36:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 09:36:17] 
[2025-05-25 09:36:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 09:36:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 09:36:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 09:36:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 09:36:17] 
[2025-05-25 09:36:17] 2025-05-25 07:18:34,566 | INFO     | **************************************
[2025-05-25 09:36:17] 2025-05-25 07:18:35,069 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-25 09:36:17] 2025-05-25 07:18:35,288 | INFO     | sufficient remaining disk space (494825111552 B)
[2025-05-25 09:36:17] 2025-05-25 07:18:35,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 09:36:17] 2025-05-25 07:18:35,289 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 09:36:17] 2025-05-25 07:18:35,289 | INFO     | update_server=False
[2025-05-25 09:36:17] 2025-05-25 07:18:35,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 09:36:17] 2025-05-25 07:18:35,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 09:36:17] 2025-05-25 07:18:35,296 | INFO     | aborting loop
[2025-05-25 09:36:17] 2025-05-25 07:18:35,320 | INFO     | all job control threads have been joined
[2025-05-25 09:36:17] 2025-05-25 07:18:35,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 09:36:17] 2025-05-25 07:18:35,926 | INFO     | all data control threads have been joined
[2025-05-25 09:36:17] 2025-05-25 07:18:36,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 09:36:17] 2025-05-25 07:18:36,152 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 09:36:17] 2025-05-25 07:18:36,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 09:36:17] 2025-05-25 07:18:36,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 09:36:17] 2025-05-25 07:18:36,294 | INFO     | [job] retrieve thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,302 | INFO     | [job] job monitor thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,326 | INFO     | [job] control thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,350 | INFO     | all payload control threads have been joined
[2025-05-25 09:36:17] 2025-05-25 07:18:36,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 09:36:17] 2025-05-25 07:18:36,802 | INFO     | [job] validate thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,881 | INFO     | [data] copytool_in thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,932 | INFO     | [data] control thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:36,980 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:37,359 | INFO     | [payload] control thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:37,374 | INFO     | [payload] validate_post thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:37,402 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:37,500 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:37,767 | INFO     | [job] queue monitor thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:37,780 | INFO     | [payload] failed_post thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:38,126 | INFO     | [data] copytool_out thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:39,692 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 09:36:17] 2025-05-25 07:18:40,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371400386368)>', '<ExcThread(monitor, started 140371090708224)>']
[2025-05-25 09:36:17] 2025-05-25 07:18:41,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 09:36:17] 2025-05-25 07:18:41,181 | INFO     | [monitor] control thread has ended
[2025-05-25 09:36:17] 2025-05-25 07:18:45,500 | INFO     | all workflow threads have been joined
[2025-05-25 09:36:17] 2025-05-25 07:18:45,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 09:36:17] 2025-05-25 07:18:45,500 | INFO     | traces error code: 0
[2025-05-25 09:36:17] 2025-05-25 07:18:45,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 09:36:17] 2025-05-25 07:18:45,837 [wrapper] ==== pilot stdout END ====
[2025-05-25 09:36:17] 2025-05-25 07:18:45,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 09:36:17] 2025-05-25 07:18:45,998 [wrapper] pilotpid: 27972
[2025-05-25 09:36:17] 2025-05-25 07:18:46,073 [wrapper] Pilot exit status: 0
[2025-05-25 09:36:17] 2025-05-25 07:18:46,384 [wrapper] pandaids: 6665439780
[2025-05-25 09:36:17] 2025-05-25 07:18:47,189 [wrapper] cleanup supervisor_pilot  5170 27973
[2025-05-25 09:36:17] 2025-05-25 07:18:47,261 [wrapper] Test setup, not cleaning
[2025-05-25 09:36:17] 2025-05-25 07:18:47,350 [wrapper] apfmon messages muted
[2025-05-25 09:36:17] 2025-05-25 07:18:47,387 [wrapper] ==== wrapper stdout END ====
[2025-05-25 09:36:17] 2025-05-25 07:18:47,428 [wrapper] ==== wrapper stderr END ====
[2025-05-25 09:36:17]  *** Error codes and diagnostics ***
[2025-05-25 09:36:17]     "exeErrorCode": 0,
[2025-05-25 09:36:17]     "exeErrorDiag": "",
[2025-05-25 09:36:17]     "pilotErrorCode": 0,
[2025-05-25 09:36:17]     "pilotErrorDiag": "",
[2025-05-25 09:36:17]  *** Listing of results directory ***
[2025-05-25 09:36:17] total 420232
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc    495897 May 24 13:51 pilot3.tar.gz
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc      5111 May 24 14:01 queuedata.json
[2025-05-25 09:36:17] -rwx------. 1 boinc boinc     37140 May 24 14:02 runpilot2-wrapper.sh
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc       100 May 25 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 09:36:17] -rwxr-xr-x. 1 boinc boinc      7986 May 25 03:28 run_atlas
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc       105 May 25 03:28 job.xml
[2025-05-25 09:36:17] -rw-r--r--. 2 boinc boinc 223557196 May 25 03:28 EVNT.44871834._000677.pool.root.1
[2025-05-25 09:36:17] -rw-r--r--. 2 boinc boinc     15093 May 25 03:28 start_atlas.sh
[2025-05-25 09:36:17] drwxrwx--x. 2 boinc boinc        68 May 25 03:28 shared
[2025-05-25 09:36:17] -rw-r--r--. 2 boinc boinc    508880 May 25 03:28 input.tar.gz
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc      6371 May 25 03:28 init_data.xml
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc         0 May 25 03:28 boinc_lockfile
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc      2558 May 25 03:58 pandaJob.out
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc    990803 May 25 04:02 agis_schedconf.cvmfs.json
[2025-05-25 09:36:17] drwx------. 4 boinc boinc      4096 May 25 04:02 pilot3
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc 198805695 May 25 09:16 HITS.44871837._016939.pool.root.1
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc       531 May 25 09:16 boinc_task_state.xml
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc      1016 May 25 09:17 memory_monitor_summary.json
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc   1596740 May 25 09:17 agis_ddmendpoints.agis.ALL.json
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc    444348 May 25 09:17 log.44871837._016939.job.log.tgz.1
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc      7685 May 25 09:18 heartbeat.json
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc        95 May 25 09:18 pilot_heartbeat.json
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc      4416 May 25 09:18 pilotlog.txt
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc   1623999 May 25 09:18 log.44871837._016939.job.log.1
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc       357 May 25 09:18 output.list
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc       620 May 25 09:18 runtime_log
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc   2088960 May 25 09:18 result.tar.gz
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc      8659 May 25 09:18 runtime_log.err
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc       656 May 25 09:18 GDINDmTl2c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8NRKDmuhb96n.diag
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc      8192 May 25 09:36 boinc_mmap_file
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc        28 May 25 09:36 wrapper_checkpoint.txt
[2025-05-25 09:36:17] -rw-r--r--. 1 boinc boinc     20792 May 25 09:36 stderr.txt
[2025-05-25 09:36:17] HITS file was successfully produced:
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc 198805695 May 25 09:16 shared/HITS.pool.root.1
[2025-05-25 09:36:17]  *** Contents of shared directory: ***
[2025-05-25 09:36:17] total 415024
[2025-05-25 09:36:17] -rw-r--r--. 2 boinc boinc 223557196 May 25 03:28 ATLAS.root_0
[2025-05-25 09:36:17] -rw-r--r--. 2 boinc boinc     15093 May 25 03:28 start_atlas.sh
[2025-05-25 09:36:17] -rw-r--r--. 2 boinc boinc    508880 May 25 03:28 input.tar.gz
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc 198805695 May 25 09:16 HITS.pool.root.1
[2025-05-25 09:36:17] -rw-------. 1 boinc boinc   2088960 May 25 09:18 result.tar.gz
09:36:19 (5837): run_atlas exited; CPU time 70384.772764
09:36:19 (5837): called boinc_finish(0)

</stderr_txt>
]]>

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