Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:19:08 (451444): wrapper (7.7.26015): starting
07:19:08 (451444): wrapper: running run_atlas (--nthreads 4)
[2025-05-25 07:19:08] Arguments: --nthreads 4
[2025-05-25 07:19:08] Threads: 4
[2025-05-25 07:19:08] Checking for CVMFS
[2025-05-25 07:19:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 07:19:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 07:19:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 07:19:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 07:19:08] 2.9.2.0 68436 1268 80020 146391 2 56 35824169 36864000 0 130560 0 1008071 99.988 383661 15666 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-25 07:19:08] CVMFS is ok
[2025-05-25 07:19:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-25 07:19:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-25 07:19:08] Further information can be found at the LHC@home message board.
[2025-05-25 07:19:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 07:19:08] Checking for apptainer binary...
[2025-05-25 07:19:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 07:19:08] Running /usr/bin/apptainer --version
[2025-05-25 07:19:08] apptainer version 1.3.6-6.1
[2025-05-25 07:19:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 07:19:08] belleA263a
[2025-05-25 07:19:08] apptainer works
[2025-05-25 07:19:08] Set ATHENA_PROC_NUMBER=4
[2025-05-25 07:19:08] Set ATHENA_CORE_NUMBER=4
[2025-05-25 07:19:08] Starting ATLAS job with PandaID=6665629537
[2025-05-25 07:19:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 08:51:05]  *** The last 200 lines of the pilot log: ***
[2025-05-25 08:51:05]  filetype=log
[2025-05-25 08:51:05]  guid=0d14d4ff-ca21-47d7-b6ee-64fd99afa4e3
[2025-05-25 08:51:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-25 08:51:05]  is_altstaged=None
[2025-05-25 08:51:05]  is_tar=False
[2025-05-25 08:51:05]  lfn=log.44871837._018518.job.log.tgz.1
[2025-05-25 08:51:05]  mtime=0
[2025-05-25 08:51:05]  protocol_id=None
[2025-05-25 08:51:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 08:51:05]  replicas=None
[2025-05-25 08:51:05]  scope=mc23_13p6TeV
[2025-05-25 08:51:05]  status=None
[2025-05-25 08:51:05]  status_code=0
[2025-05-25 08:51:05]  storage_token=
[2025-05-25 08:51:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6665629537/log.44871837._018518.job.log.tgz.1
[2025-05-25 08:51:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/93/log.44871837._018518.job.log.tgz.1
[2025-05-25 08:51:05]  workdir=None
[2025-05-25 08:51:05] ]
[2025-05-25 08:51:05] 2025-05-25 06:50:44,148 | INFO     | transferring file log.44871837._018518.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6665629537/log.44871837._018518.job.log.tgz.1 to /local/data/boinc/
[2025-05-25 08:51:05] 2025-05-25 06:50:44,148 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6665629537/log.44871837._018518.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0185
[2025-05-25 08:51:05] 2025-05-25 06:50:44,168 | INFO     | adding to output.list: log.44871837._018518.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/93/log.44871837._018518.job.log.tg
[2025-05-25 08:51:05] 2025-05-25 06:50:44,168 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 08:51:05] 2025-05-25 06:50:44,168 | INFO     | summary of transferred files:
[2025-05-25 08:51:05] 2025-05-25 06:50:44,168 | INFO     |  -- lfn=log.44871837._018518.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 08:51:05] 2025-05-25 06:50:44,168 | INFO     | stage-out finished correctly
[2025-05-25 08:51:05] 2025-05-25 06:50:44,209 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 08:51:05] 2025-05-25 06:50:44,483 | INFO     | monitor loop #421: job 0:6665629537 is in state 'finished'
[2025-05-25 08:51:05] 2025-05-25 06:50:44,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:51:05] 2025-05-25 06:50:46,254 | INFO     | job 6665629537 has state=finished
[2025-05-25 08:51:05] 2025-05-25 06:50:46,254 | INFO     | preparing for final server update for job 6665629537 in state='finished'
[2025-05-25 08:51:05] 2025-05-25 06:50:46,254 | INFO     | this job has now completed (state=finished)
[2025-05-25 08:51:05] 2025-05-25 06:50:46,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 08:51:05] 2025-05-25 06:50:46,255 | INFO     | log transfer has been attempted: DONE
[2025-05-25 08:51:05] 2025-05-25 06:50:46,255 | INFO     | job 6665629537 has finished - writing final server update
[2025-05-25 08:51:05] 2025-05-25 06:50:46,255 | INFO     | total number of processed events: 400 (read)
[2025-05-25 08:51:05] 2025-05-25 06:50:46,256 | INFO     | executing command: lscpu
[2025-05-25 08:51:05] 2025-05-25 06:50:46,279 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 08:51:05] 2025-05-25 06:50:46,987 | INFO     | monitor loop #422: job 0:6665629537 is in state 'finished'
[2025-05-25 08:51:05] 2025-05-25 06:50:46,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,489 | INFO     | monitor loop #423: job 0:6665629537 is in state 'finished'
[2025-05-25 08:51:05] 2025-05-25 06:50:49,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,752 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 08:51:05] 2025-05-25 06:50:49,752 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6665629537/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,753 | INFO     | extracted standard info from prmon json
[2025-05-25 08:51:05] 2025-05-25 06:50:49,753 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 08:51:05] 2025-05-25 06:50:49,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 08:51:05] 2025-05-25 06:50:49,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 08:51:05] 2025-05-25 06:50:49,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | fitting pss+swap vs Time
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | sum of square deviations: 177275882.0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | sum of deviations: -12666037316.0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | mean x: 1748153186.0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | mean y: 2582680.951807229
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | -- intersect: 124904928325.24136
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | intersect: 124904928325.24136
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | chi2: 0.0781756877511338
[2025-05-25 08:51:05] 2025-05-25 06:50:49,754 | INFO     | -- intersect: 124904928325.24136
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | current memory leak: -71.45 B/s (using 83 data points, chi2=0.08)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | ..............................
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . Timing measurements:
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . get job = 0 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . initial setup = 1 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . payload setup = 5 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . stage-in = 0 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . payload execution = 5463 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . stage-out = 0 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | . log creation = 0 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,755 | INFO     | ..............................
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | 
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | job summary report
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | --------------------------------------------------
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | PanDA job id: 6665629537
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | task id: 44871837
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | errors: (none)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | pilot state: finished 
[2025-05-25 08:51:05] 2025-05-25 06:50:49,796 | INFO     | transexitcode: 0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | exeerrorcode: 0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | exeerrordiag: 
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | exitcode: 0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | exitmsg: OK
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | cpuconsumptiontime: 20875 s
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | nevents: 400
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | neventsw: 0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | pid: 461774
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | pgrp: 461774
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | corecount: 4
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | event service: False
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | sizes: {0: 2393515, 1: 2393770, 4: 2393976, 11: 2394004, 5471: 2420586, 5472: 2420585, 5473: 2429772, 5479: 2429886}
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | --------------------------------------------------
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | 
[2025-05-25 08:51:05] 2025-05-25 06:50:49,797 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-25 08:51:05] 2025-05-25 06:50:49,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | job 6665629537 has completed (purged errors)
[2025-05-25 08:51:05] 2025-05-25 06:50:49,816 | INFO     | overall cleanup function is called
[2025-05-25 08:51:05] 2025-05-25 06:50:50,823 | INFO     | --- collectZombieJob: --- 10, [461774]
[2025-05-25 08:51:05] 2025-05-25 06:50:50,823 | INFO     | zombie collector waiting for pid 461774
[2025-05-25 08:51:05] 2025-05-25 06:50:50,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 08:51:05] 2025-05-25 06:50:50,823 | INFO     | collected zombie processes
[2025-05-25 08:51:05] 2025-05-25 06:50:50,823 | INFO     | will attempt to kill all subprocesses of pid=461774
[2025-05-25 08:51:05] 2025-05-25 06:50:50,869 | INFO     | process IDs to be killed: [461774] (in reverse order)
[2025-05-25 08:51:05] 2025-05-25 06:50:50,902 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 08:51:05] 2025-05-25 06:50:50,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 08:51:05] 2025-05-25 06:50:50,904 | INFO     | did not find any defunct processes belonging to 461774
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | did not find any defunct processes belonging to 461774
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | ready for new job
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | **************************************
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | **************************************
[2025-05-25 08:51:05] 2025-05-25 06:50:50,906 | INFO     | 
[2025-05-25 08:51:05] 2025-05-25 06:50:50,907 | INFO     | architecture information:
[2025-05-25 08:51:05] 2025-05-25 06:50:50,907 | INFO     | executing command: cat /etc/os-release
[2025-05-25 08:51:05] 2025-05-25 06:50:50,922 | INFO     | cat /etc/os-release:
[2025-05-25 08:51:05] NAME="CentOS Linux"
[2025-05-25 08:51:05] VERSION="7 (Core)"
[2025-05-25 08:51:05] ID="centos"
[2025-05-25 08:51:05] ID_LIKE="rhel fedora"
[2025-05-25 08:51:05] VERSION_ID="7"
[2025-05-25 08:51:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 08:51:05] ANSI_COLOR="0;31"
[2025-05-25 08:51:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 08:51:05] HOME_URL="https://www.centos.org/"
[2025-05-25 08:51:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 08:51:05] 
[2025-05-25 08:51:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 08:51:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 08:51:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 08:51:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 08:51:05] 
[2025-05-25 08:51:05] 2025-05-25 06:50:50,922 | INFO     | **************************************
[2025-05-25 08:51:05] 2025-05-25 06:50:51,425 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | INFO     | sufficient remaining disk space (319400443904 B)
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | INFO     | update_server=False
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | INFO     | aborting loop
[2025-05-25 08:51:05] 2025-05-25 06:50:51,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:51:05] 2025-05-25 06:50:51,537 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 08:51:05] 2025-05-25 06:50:51,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 08:51:05] 2025-05-25 06:50:51,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 08:51:05] 2025-05-25 06:50:51,743 | INFO     | all data control threads have been joined
[2025-05-25 08:51:05] 2025-05-25 06:50:51,802 | INFO     | all job control threads have been joined
[2025-05-25 08:51:05] 2025-05-25 06:50:51,863 | INFO     | all payload control threads have been joined
[2025-05-25 08:51:05] 2025-05-25 06:50:52,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 08:51:05] 2025-05-25 06:50:52,447 | INFO     | [job] retrieve thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,450 | INFO     | [job] job monitor thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,450 | INFO     | [job] queue monitor thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,531 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,749 | INFO     | [data] control thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,808 | INFO     | [job] control thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,869 | INFO     | [payload] control thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,873 | INFO     | [payload] failed_post thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:52,963 | INFO     | [job] validate thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:53,095 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:53,175 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:53,400 | INFO     | [payload] validate_post thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:53,479 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:53,859 | INFO     | [data] copytool_in thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:54,227 | INFO     | [data] copytool_out thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:50:54,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 08:51:05] 2025-05-25 06:50:58,768 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 08:51:05] 2025-05-25 06:51:00,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139880265492288)>', '<ExcThread(monitor, started 139879476348672)>']
[2025-05-25 08:51:05] 2025-05-25 06:51:00,582 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 08:51:05] 2025-05-25 06:51:00,583 | INFO     | [monitor] control thread has ended
[2025-05-25 08:51:05] 2025-05-25 06:51:05,040 | INFO     | all workflow threads have been joined
[2025-05-25 08:51:05] 2025-05-25 06:51:05,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 08:51:05] 2025-05-25 06:51:05,040 | INFO     | traces error code: 0
[2025-05-25 08:51:05] 2025-05-25 06:51:05,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 08:51:05] 2025-05-25 06:51:05,119 [wrapper] ==== pilot stdout END ====
[2025-05-25 08:51:05] 2025-05-25 06:51:05,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 08:51:05] 2025-05-25 06:51:05,127 [wrapper] pilotpid: 455155
[2025-05-25 08:51:05] 2025-05-25 06:51:05,131 [wrapper] Pilot exit status: 0
[2025-05-25 08:51:05] 2025-05-25 06:51:05,144 [wrapper] pandaids: 6665629537
[2025-05-25 08:51:05] 2025-05-25 06:51:05,167 [wrapper] cleanup supervisor_pilot  473949 455156
[2025-05-25 08:51:05] 2025-05-25 06:51:05,171 [wrapper] Test setup, not cleaning
[2025-05-25 08:51:05] 2025-05-25 06:51:05,175 [wrapper] apfmon messages muted
[2025-05-25 08:51:05] 2025-05-25 06:51:05,179 [wrapper] ==== wrapper stdout END ====
[2025-05-25 08:51:05] 2025-05-25 06:51:05,184 [wrapper] ==== wrapper stderr END ====
[2025-05-25 08:51:05]  *** Error codes and diagnostics ***
[2025-05-25 08:51:05]     "exeErrorCode": 0,
[2025-05-25 08:51:05]     "exeErrorDiag": "",
[2025-05-25 08:51:05]     "pilotErrorCode": 0,
[2025-05-25 08:51:05]     "pilotErrorDiag": "",
[2025-05-25 08:51:05]  *** Listing of results directory ***
[2025-05-25 08:51:05] total 422748
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc    495897 May 24 15:46 pilot3.tar.gz
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc      5111 May 24 16:01 queuedata.json
[2025-05-25 08:51:05] -rwx------ 1 boinc boinc     37140 May 24 16:02 runpilot2-wrapper.sh
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc       100 May 25 07:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 08:51:05] -rwxr-xr-x 1 boinc boinc      7986 May 25 07:19 run_atlas
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc       105 May 25 07:19 job.xml
[2025-05-25 08:51:05] -rw-r--r-- 2 boinc boinc 226994575 May 25 07:19 EVNT.44871834._000738.pool.root.1
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc      6863 May 25 07:19 init_data.xml
[2025-05-25 08:51:05] drwxrwx--x 2 boinc boinc      4096 May 25 07:19 shared
[2025-05-25 08:51:05] -rw-r--r-- 2 boinc boinc    508876 May 25 07:19 input.tar.gz
[2025-05-25 08:51:05] -rw-r--r-- 2 boinc boinc     15093 May 25 07:19 start_atlas.sh
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc         0 May 25 07:19 boinc_lockfile
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc      2558 May 25 07:19 pandaJob.out
[2025-05-25 08:51:05] -rw------- 1 boinc boinc    990811 May 25 07:19 agis_schedconf.cvmfs.json
[2025-05-25 08:51:05] -rw------- 1 boinc boinc   1596740 May 25 07:19 agis_ddmendpoints.agis.ALL.json
[2025-05-25 08:51:05] drwx------ 4 boinc boinc      4096 May 25 07:19 pilot3
[2025-05-25 08:51:05] -rw------- 1 boinc boinc 200488491 May 25 08:50 HITS.44871837._018518.pool.root.1
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc       529 May 25 08:50 boinc_task_state.xml
[2025-05-25 08:51:05] -rw------- 1 boinc boinc      1022 May 25 08:50 memory_monitor_summary.json
[2025-05-25 08:51:05] -rw------- 1 boinc boinc    258743 May 25 08:50 log.44871837._018518.job.log.tgz.1
[2025-05-25 08:51:05] -rw------- 1 boinc boinc        95 May 25 08:50 pilot_heartbeat.json
[2025-05-25 08:51:05] -rw------- 1 boinc boinc      7668 May 25 08:50 heartbeat.json
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc        27 May 25 08:50 wrapper_checkpoint.txt
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc      8192 May 25 08:50 boinc_mmap_file
[2025-05-25 08:51:05] -rw------- 1 boinc boinc      4357 May 25 08:51 pilotlog.txt
[2025-05-25 08:51:05] -rw------- 1 boinc boinc    527393 May 25 08:51 log.44871837._018518.job.log.1
[2025-05-25 08:51:05] -rw------- 1 boinc boinc       357 May 25 08:51 output.list
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc       620 May 25 08:51 runtime_log
[2025-05-25 08:51:05] -rw------- 1 boinc boinc    808960 May 25 08:51 result.tar.gz
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc      8753 May 25 08:51 runtime_log.err
[2025-05-25 08:51:05] -rw------- 1 boinc boinc       663 May 25 08:51 W3WKDmhd4c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFdRKDmdD3YRo.diag
[2025-05-25 08:51:05] -rw-r--r-- 1 boinc boinc     21208 May 25 08:51 stderr.txt
[2025-05-25 08:51:05] HITS file was successfully produced:
[2025-05-25 08:51:05] -rw------- 1 boinc boinc 200488491 May 25 08:50 shared/HITS.pool.root.1
[2025-05-25 08:51:05]  *** Contents of shared directory: ***
[2025-05-25 08:51:05] total 418784
[2025-05-25 08:51:05] -rw-r--r-- 2 boinc boinc 226994575 May 25 07:19 ATLAS.root_0
[2025-05-25 08:51:05] -rw-r--r-- 2 boinc boinc    508876 May 25 07:19 input.tar.gz
[2025-05-25 08:51:05] -rw-r--r-- 2 boinc boinc     15093 May 25 07:19 start_atlas.sh
[2025-05-25 08:51:05] -rw------- 1 boinc boinc 200488491 May 25 08:50 HITS.pool.root.1
[2025-05-25 08:51:05] -rw------- 1 boinc boinc    808960 May 25 08:51 result.tar.gz
08:51:07 (451444): run_atlas exited; CPU time 20890.329478
08:51:07 (451444): called boinc_finish(0)

</stderr_txt>
]]>

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