Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:38:50 (487294): wrapper (7.7.26015): starting
11:38:50 (487294): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 11:38:50] Arguments: --nthreads 6
[2025-05-25 11:38:50] Threads: 6
[2025-05-25 11:38:50] Checking for CVMFS
[2025-05-25 11:38:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 11:38:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 11:38:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 11:38:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 11:38:51] 2.11.5.0 3961534 1324 72504 146387 2 56 43698707 52428800 0 130560 0 1981953 99.994 316282 87 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 11:38:51] CVMFS is ok
[2025-05-25 11:38:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 11:38:51] Checking for apptainer binary...
[2025-05-25 11:38:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 11:38:51] Running /usr/bin/apptainer --version
[2025-05-25 11:38:51] apptainer version 1.3.6-1.el9
[2025-05-25 11:38:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 11:38:51] testio002
[2025-05-25 11:38:51] apptainer works
[2025-05-25 11:38:51] Set ATHENA_PROC_NUMBER=6
[2025-05-25 11:38:51] Set ATHENA_CORE_NUMBER=6
[2025-05-25 11:38:51] Starting ATLAS job with PandaID=6665382021
[2025-05-25 11:38:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 13:15:47]  *** The last 200 lines of the pilot log: ***
[2025-05-25 13:15:47] 2025-05-25 04:14:49,386 | INFO     | monitor loop #425: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:14:49,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:14:51,889 | INFO     | monitor loop #426: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:14:51,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:14:54,392 | INFO     | monitor loop #427: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:14:54,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:14:56,895 | INFO     | monitor loop #428: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:14:56,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:14:59,397 | INFO     | monitor loop #429: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:14:59,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:00,270 | INFO     | PID=491966 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 13:15:47] 2025-05-25 04:15:00,270 | INFO     | .. there are 2 such processes running
[2025-05-25 13:15:47] 2025-05-25 04:15:01,900 | INFO     | monitor loop #430: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:01,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:04,403 | INFO     | monitor loop #431: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:04,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:06,906 | INFO     | monitor loop #432: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:06,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:09,409 | INFO     | monitor loop #433: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:09,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:11,911 | INFO     | monitor loop #434: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:11,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:14,414 | INFO     | monitor loop #435: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:14,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:16,916 | INFO     | monitor loop #436: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:16,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:19,419 | INFO     | monitor loop #437: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:19,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:21,922 | INFO     | monitor loop #438: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:21,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:22,354 | INFO     | PID=491966 has CPU usage=0.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-25 13:15:47] 2025-05-25 04:15:22,354 | INFO     | .. there are 2 such processes running
[2025-05-25 13:15:47] 2025-05-25 04:15:24,425 | INFO     | monitor loop #439: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:24,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:26,926 | INFO     | monitor loop #440: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:26,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:29,429 | INFO     | monitor loop #441: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:29,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:31,932 | INFO     | monitor loop #442: job 0:6665382021 is in state 'finished'
[2025-05-25 13:15:47] 2025-05-25 04:15:31,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 13:15:47] 2025-05-25 04:15:32,827 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-25 13:15:47] 2025-05-25 04:15:32,828 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6665382021/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 13:15:47] 2025-05-25 04:15:32,828 | INFO     | extracted standard info from prmon json
[2025-05-25 13:15:47] 2025-05-25 04:15:32,828 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 13:15:47] 2025-05-25 04:15:32,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 13:15:47] 2025-05-25 04:15:32,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 13:15:47] 2025-05-25 04:15:32,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | fitting pss+swap vs Time
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | sum of square deviations: 199748807.10588267
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | sum of deviations: 11487468111.694115
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | mean x: 1748143690.4588234
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | mean y: 2427086.3411764707
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | -- intersect: -100532565786.78316
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | intersect: -100532565786.78316
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | chi2: 1.4517239621168012
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | -- intersect: -100532565786.78316
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | current memory leak: 57.51 B/s (using 85 data points, chi2=1.45)
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | ..............................
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . Timing measurements:
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . get job = 0 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . initial setup = 4 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . payload setup = 1 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . stage-in = 0 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . payload execution = 5686 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . stage-out = 0 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | . log creation = 0 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,829 | INFO     | ..............................
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | 
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | job summary report
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | --------------------------------------------------
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | PanDA job id: 6665382021
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | task id: 44871837
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | errors: (none)
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | pilot state: finished 
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | transexitcode: 0
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | exeerrorcode: 0
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | exeerrordiag: 
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | exitcode: 0
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | exitmsg: OK
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | cpuconsumptiontime: 28934 s
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | nevents: 400
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | neventsw: 0
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | pid: 507749
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | pgrp: 507749
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | corecount: 6
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | event service: False
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | sizes: {0: 2393739, 1: 2393945, 11: 2393973, 5692: 2429431, 5695: 2429431, 5783: 2429601}
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | --------------------------------------------------
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | 
[2025-05-25 13:15:47] 2025-05-25 04:15:32,856 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-25 13:15:47] 2025-05-25 04:15:32,863 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,863 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | job 6665382021 has completed (purged errors)
[2025-05-25 13:15:47] 2025-05-25 04:15:32,864 | INFO     | overall cleanup function is called
[2025-05-25 13:15:47] 2025-05-25 04:15:33,870 | INFO     | --- collectZombieJob: --- 10, [507749]
[2025-05-25 13:15:47] 2025-05-25 04:15:33,870 | INFO     | zombie collector waiting for pid 507749
[2025-05-25 13:15:47] 2025-05-25 04:15:33,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 13:15:47] 2025-05-25 04:15:33,870 | INFO     | collected zombie processes
[2025-05-25 13:15:47] 2025-05-25 04:15:33,871 | INFO     | will attempt to kill all subprocesses of pid=507749
[2025-05-25 13:15:47] 2025-05-25 04:15:33,902 | INFO     | process IDs to be killed: [507749] (in reverse order)
[2025-05-25 13:15:47] 2025-05-25 04:15:33,916 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 13:15:47] 2025-05-25 04:15:33,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 13:15:47] 2025-05-25 04:15:33,917 | INFO     | did not find any defunct processes belonging to 507749
[2025-05-25 13:15:47] 2025-05-25 04:15:33,918 | INFO     | did not find any defunct processes belonging to 507749
[2025-05-25 13:15:47] 2025-05-25 04:15:33,918 | INFO     | ready for new job
[2025-05-25 13:15:47] 2025-05-25 04:15:33,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 13:15:47] 2025-05-25 04:15:33,919 | INFO     | **************************************
[2025-05-25 13:15:47] 2025-05-25 04:15:33,919 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 13:15:47] 2025-05-25 04:15:33,919 | INFO     | **************************************
[2025-05-25 13:15:47] 2025-05-25 04:15:33,919 | INFO     | 
[2025-05-25 13:15:47] 2025-05-25 04:15:33,919 | INFO     | architecture information:
[2025-05-25 13:15:47] 2025-05-25 04:15:33,919 | INFO     | executing command: cat /etc/os-release
[2025-05-25 13:15:47] 2025-05-25 04:15:33,923 | INFO     | cat /etc/os-release:
[2025-05-25 13:15:47] NAME="CentOS Linux"
[2025-05-25 13:15:47] VERSION="7 (Core)"
[2025-05-25 13:15:47] ID="centos"
[2025-05-25 13:15:47] ID_LIKE="rhel fedora"
[2025-05-25 13:15:47] VERSION_ID="7"
[2025-05-25 13:15:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 13:15:47] ANSI_COLOR="0;31"
[2025-05-25 13:15:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 13:15:47] HOME_URL="https://www.centos.org/"
[2025-05-25 13:15:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 13:15:47] 
[2025-05-25 13:15:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 13:15:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 13:15:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 13:15:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 13:15:47] 
[2025-05-25 13:15:47] 2025-05-25 04:15:33,923 | INFO     | **************************************
[2025-05-25 13:15:47] 2025-05-25 04:15:34,426 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-25 13:15:47] 2025-05-25 04:15:34,444 | INFO     | sufficient remaining disk space (300723208192 B)
[2025-05-25 13:15:47] 2025-05-25 04:15:34,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 13:15:47] 2025-05-25 04:15:34,445 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 13:15:47] 2025-05-25 04:15:34,445 | INFO     | update_server=False
[2025-05-25 13:15:47] 2025-05-25 04:15:34,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 13:15:47] 2025-05-25 04:15:34,446 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-25 13:15:47] 2025-05-25 04:15:34,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:15:47] 2025-05-25 04:15:34,447 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 13:15:47] 2025-05-25 04:15:34,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 13:15:47] 2025-05-25 04:15:34,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 13:15:47] 2025-05-25 04:15:34,493 | INFO     | all payload control threads have been joined
[2025-05-25 13:15:47] 2025-05-25 04:15:34,720 | INFO     | all job control threads have been joined
[2025-05-25 13:15:47] 2025-05-25 04:15:34,830 | INFO     | all data control threads have been joined
[2025-05-25 13:15:47] 2025-05-25 04:15:35,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 13:15:47] 2025-05-25 04:15:35,441 | INFO     | aborting loop
[2025-05-25 13:15:47] 2025-05-25 04:15:35,450 | INFO     | [job] retrieve thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:35,452 | INFO     | [job] queue monitor thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:35,498 | INFO     | [payload] control thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:35,726 | INFO     | [job] control thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:35,774 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 13:15:47] 2025-05-25 04:15:35,836 | INFO     | [data] control thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:35,858 | INFO     | [payload] validate_post thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,022 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,025 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,026 | INFO     | [data] copytool_in thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,061 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,196 | INFO     | [job] validate thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,447 | INFO     | [job] job monitor thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:36,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 13:15:47] 2025-05-25 04:15:36,892 | INFO     | [payload] failed_post thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:37,780 | INFO     | [data] copytool_out thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:40,840 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 13:15:47] 2025-05-25 04:15:42,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988529956672)>', '<ExcThread(monitor, started 139988175922944)>']
[2025-05-25 13:15:47] 2025-05-25 04:15:42,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 13:15:47] 2025-05-25 04:15:42,488 | INFO     | [monitor] control thread has ended
[2025-05-25 13:15:47] 2025-05-25 04:15:47,427 | INFO     | all workflow threads have been joined
[2025-05-25 13:15:47] 2025-05-25 04:15:47,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 13:15:47] 2025-05-25 04:15:47,427 | INFO     | traces error code: 0
[2025-05-25 13:15:47] 2025-05-25 04:15:47,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 13:15:47] 2025-05-25 04:15:47,465 [wrapper] ==== pilot stdout END ====
[2025-05-25 13:15:47] 2025-05-25 04:15:47,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 13:15:47] 2025-05-25 04:15:47,467 [wrapper] pilotpid: 491966
[2025-05-25 13:15:47] 2025-05-25 04:15:47,468 [wrapper] Pilot exit status: 0
[2025-05-25 13:15:47] 2025-05-25 04:15:47,470 [wrapper] pandaids: 6665382021
[2025-05-25 13:15:47] 2025-05-25 04:15:47,477 [wrapper] cleanup supervisor_pilot  530411 491968
[2025-05-25 13:15:47] 2025-05-25 04:15:47,478 [wrapper] Test setup, not cleaning
[2025-05-25 13:15:47] 2025-05-25 04:15:47,478 [wrapper] apfmon messages muted
[2025-05-25 13:15:47] 2025-05-25 04:15:47,479 [wrapper] ==== wrapper stdout END ====
[2025-05-25 13:15:47] 2025-05-25 04:15:47,479 [wrapper] ==== wrapper stderr END ====
[2025-05-25 13:15:47]  *** Error codes and diagnostics ***
[2025-05-25 13:15:47]     "exeErrorCode": 0,
[2025-05-25 13:15:47]     "exeErrorDiag": "",
[2025-05-25 13:15:47]     "pilotErrorCode": 0,
[2025-05-25 13:15:47]     "pilotErrorDiag": "",
[2025-05-25 13:15:47]  *** Listing of results directory ***
[2025-05-25 13:15:47] total 422676
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc    495897 May 24 20:36 pilot3.tar.gz
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc      5111 May 24 20:38 queuedata.json
[2025-05-25 13:15:47] -rwx------. 1 boinc boinc     37140 May 24 20:42 runpilot2-wrapper.sh
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc       100 May 25 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 13:15:47] -rwxr-xr-x. 1 boinc boinc      7986 May 25 11:38 run_atlas
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc       105 May 25 11:38 job.xml
[2025-05-25 13:15:47] -rw-r--r--. 2 boinc boinc     15093 May 25 11:38 start_atlas.sh
[2025-05-25 13:15:47] drwxrwx--x. 2 boinc boinc        68 May 25 11:38 shared
[2025-05-25 13:15:47] -rw-r--r--. 2 boinc boinc    508887 May 25 11:38 input.tar.gz
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc      9627 May 25 11:38 init_data.xml
[2025-05-25 13:15:47] -rw-r--r--. 2 boinc boinc 224886475 May 25 11:38 EVNT.44871834._000661.pool.root.1
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc         0 May 25 11:38 boinc_lockfile
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc      2558 May 25 11:38 pandaJob.out
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc    990803 May 25 11:38 agis_schedconf.cvmfs.json
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc   1596740 May 25 11:38 agis_ddmendpoints.agis.ALL.json
[2025-05-25 13:15:47] drwx------. 4 boinc boinc      4096 May 25 11:38 pilot3
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc 202488370 May 25 13:13 HITS.44871837._016511.pool.root.1
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc       529 May 25 13:13 boinc_task_state.xml
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc      1025 May 25 13:13 memory_monitor_summary.json
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc    272890 May 25 13:14 log.44871837._016511.job.log.tgz.1
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc        96 May 25 13:15 pilot_heartbeat.json
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc      8192 May 25 13:15 boinc_mmap_file
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc        27 May 25 13:15 wrapper_checkpoint.txt
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc      7694 May 25 13:15 heartbeat.json
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc      4477 May 25 13:15 pilotlog.txt
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc    541361 May 25 13:15 log.44871837._016511.job.log.1
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc       357 May 25 13:15 output.list
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc       620 May 25 13:15 runtime_log
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc    829440 May 25 13:15 result.tar.gz
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc      8617 May 25 13:15 runtime_log.err
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc       641 May 25 13:15 i4KMDmbR2c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmfMKDmH7A2On.diag
[2025-05-25 13:15:47] -rw-r--r--. 1 boinc boinc     22114 May 25 13:15 stderr.txt
[2025-05-25 13:15:47] HITS file was successfully produced:
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc 202488370 May 25 13:13 shared/HITS.pool.root.1
[2025-05-25 13:15:47]  *** Contents of shared directory: ***
[2025-05-25 13:15:47] total 418688
[2025-05-25 13:15:47] -rw-r--r--. 2 boinc boinc     15093 May 25 11:38 start_atlas.sh
[2025-05-25 13:15:47] -rw-r--r--. 2 boinc boinc    508887 May 25 11:38 input.tar.gz
[2025-05-25 13:15:47] -rw-r--r--. 2 boinc boinc 224886475 May 25 11:38 ATLAS.root_0
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc 202488370 May 25 13:13 HITS.pool.root.1
[2025-05-25 13:15:47] -rw-------. 1 boinc boinc    829440 May 25 13:15 result.tar.gz
13:15:49 (487294): run_atlas exited; CPU time 28968.216139
13:15:49 (487294): called boinc_finish(0)

</stderr_txt>
]]>

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