Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:23:14 (5766): wrapper (7.7.26015): starting
02:23:14 (5766): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 02:23:14] Arguments: --nthreads 8
[2025-05-25 02:23:14] Threads: 8
[2025-05-25 02:23:14] Checking for CVMFS
[2025-05-25 02:23:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 02:23:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 02:23:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 02:23:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 02:23:14] 2.11.2.0 13493 18210 92160 146384 0 255 20752519 25165825 2066 130560 0 9383185 99.685 12903787 2303 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 02:23:14] CVMFS is ok
[2025-05-25 02:23:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 02:23:14] Checking for apptainer binary...
[2025-05-25 02:23:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 02:23:14] Running /usr/bin/apptainer --version
[2025-05-25 02:23:14] apptainer version 1.3.2-1.el7
[2025-05-25 02:23:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 02:23:15] cg-vwn488.simple-grid.lan
[2025-05-25 02:23:15] apptainer works
[2025-05-25 02:23:15] Set ATHENA_PROC_NUMBER=8
[2025-05-25 02:23:15] Set ATHENA_CORE_NUMBER=8
[2025-05-25 02:23:15] Starting ATLAS job with PandaID=6665629877
[2025-05-25 02:23:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 06:48:57]  *** The last 200 lines of the pilot log: ***
[2025-05-25 06:48:57] 2025-05-25 04:48:38,510 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6665629877/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,511 | INFO     | extracted standard info from prmon json
[2025-05-25 06:48:57] 2025-05-25 04:48:38,511 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 06:48:57] 2025-05-25 04:48:38,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 06:48:57] 2025-05-25 04:48:38,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 06:48:57] 2025-05-25 04:48:38,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 06:48:57] 2025-05-25 04:48:38,516 | INFO     | fitting pss+swap vs Time
[2025-05-25 06:48:57] 2025-05-25 04:48:38,517 | INFO     | sum of square deviations: 5387301010.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,519 | INFO     | sum of deviations: -37977244945.999985
[2025-05-25 06:48:57] 2025-05-25 04:48:38,519 | INFO     | mean x: 1748140546.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,519 | INFO     | mean y: 2521908.1853281856
[2025-05-25 06:48:57] 2025-05-25 04:48:38,519 | INFO     | -- intersect: 12325865562.501787
[2025-05-25 06:48:57] 2025-05-25 04:48:38,520 | INFO     | intersect: 12325865562.501787
[2025-05-25 06:48:57] 2025-05-25 04:48:38,530 | INFO     | chi2: 2.585578191623699
[2025-05-25 06:48:57] 2025-05-25 04:48:38,531 | INFO     | sum of square deviations: 5081276667.5
[2025-05-25 06:48:57] 2025-05-25 04:48:38,533 | INFO     | sum of deviations: -19983020103.500004
[2025-05-25 06:48:57] 2025-05-25 04:48:38,533 | INFO     | mean x: 1748140393.5
[2025-05-25 06:48:57] 2025-05-25 04:48:38,533 | INFO     | mean y: 2530740.9566929135
[2025-05-25 06:48:57] 2025-05-25 04:48:38,533 | INFO     | -- intersect: 6877402335.822651
[2025-05-25 06:48:57] 2025-05-25 04:48:38,533 | INFO     | intersect: 6877402335.822651
[2025-05-25 06:48:57] 2025-05-25 04:48:38,534 | INFO     | chi2: 1.817686919748948
[2025-05-25 06:48:57] 2025-05-25 04:48:38,534 | INFO     | current chi2=1.817686919748948 (change=29.699015653923368 %)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,534 | INFO     | sum of square deviations: 4787066500.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,536 | INFO     | sum of deviations: -19502102111.999992
[2025-05-25 06:48:57] 2025-05-25 04:48:38,536 | INFO     | mean x: 1748140241.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,536 | INFO     | mean y: 2530990.2610441768
[2025-05-25 06:48:57] 2025-05-25 04:48:38,536 | INFO     | -- intersect: 7124305773.644204
[2025-05-25 06:48:57] 2025-05-25 04:48:38,536 | INFO     | intersect: 7124305773.644204
[2025-05-25 06:48:57] 2025-05-25 04:48:38,537 | INFO     | chi2: 1.8164956366296978
[2025-05-25 06:48:57] 2025-05-25 04:48:38,537 | INFO     | current chi2=1.8164956366296978 (change=0.06553841072998115 %)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,537 | INFO     | right removable region: 248
[2025-05-25 06:48:57] 2025-05-25 04:48:38,537 | INFO     | sum of square deviations: 5081276667.5
[2025-05-25 06:48:57] 2025-05-25 04:48:38,539 | INFO     | sum of deviations: -79241378908.5
[2025-05-25 06:48:57] 2025-05-25 04:48:38,540 | INFO     | mean x: 1748140698.5
[2025-05-25 06:48:57] 2025-05-25 04:48:38,540 | INFO     | mean y: 2542295.6653543306
[2025-05-25 06:48:57] 2025-05-25 04:48:38,540 | INFO     | -- intersect: 27264407480.29877
[2025-05-25 06:48:57] 2025-05-25 04:48:38,540 | INFO     | intersect: 27264407480.29877
[2025-05-25 06:48:57] 2025-05-25 04:48:38,540 | INFO     | chi2: 1.0533512817374073
[2025-05-25 06:48:57] 2025-05-25 04:48:38,540 | INFO     | current chi2=1.0533512817374073 (change=59.26051336796275 %)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,541 | INFO     | sum of square deviations: 4787066500.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,560 | INFO     | sum of deviations: -75360326773.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,560 | INFO     | mean x: 1748140851.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,560 | INFO     | mean y: 2540263.7188755022
[2025-05-25 06:48:57] 2025-05-25 04:48:38,560 | INFO     | -- intersect: 27522622923.23286
[2025-05-25 06:48:57] 2025-05-25 04:48:38,560 | INFO     | intersect: 27522622923.23286
[2025-05-25 06:48:57] 2025-05-25 04:48:38,561 | INFO     | chi2: 1.044224011038117
[2025-05-25 06:48:57] 2025-05-25 04:48:38,561 | INFO     | current chi2=1.044224011038117 (change=0.8664982762669468 %)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,561 | INFO     | left removable region: 20
[2025-05-25 06:48:57] 2025-05-25 04:48:38,561 | INFO     | sum of square deviations: 3675146117.0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,563 | INFO     | sum of deviations: -41983017468.00001
[2025-05-25 06:48:57] 2025-05-25 04:48:38,563 | INFO     | mean x: 1748140820.5
[2025-05-25 06:48:57] 2025-05-25 04:48:38,563 | INFO     | mean y: 2542177.5877192984
[2025-05-25 06:48:57] 2025-05-25 04:48:38,563 | INFO     | -- intersect: 19972422086.33132
[2025-05-25 06:48:57] 2025-05-25 04:48:38,564 | INFO     | intersect: 19972422086.33132
[2025-05-25 06:48:57] 2025-05-25 04:48:38,564 | INFO     | chi2: 0.23472440383438747
[2025-05-25 06:48:57] 2025-05-25 04:48:38,564 | INFO     | -- intersect: 19972422086.33132
[2025-05-25 06:48:57] 2025-05-25 04:48:38,564 | INFO     | current memory leak: -11.42 B/s (using 228 data points, chi2=0.23)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | ..............................
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . Timing measurements:
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . get job = 0 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . initial setup = 2 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . payload setup = 18 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . stage-in = 0 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . payload execution = 15763 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . stage-out = 4 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,565 | INFO     | . log creation = 1 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,566 | INFO     | ..............................
[2025-05-25 06:48:57] 2025-05-25 04:48:38,683 | INFO     | 
[2025-05-25 06:48:57] 2025-05-25 04:48:38,683 | INFO     | job summary report
[2025-05-25 06:48:57] 2025-05-25 04:48:38,683 | INFO     | --------------------------------------------------
[2025-05-25 06:48:57] 2025-05-25 04:48:38,683 | INFO     | PanDA job id: 6665629877
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | task id: 44871837
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | errors: (none)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | pilot state: finished 
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | transexitcode: 0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | exeerrorcode: 0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | exeerrordiag: 
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | exitcode: 0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | exitmsg: OK
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | cpuconsumptiontime: 61681 s
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | nevents: 400
[2025-05-25 06:48:57] 2025-05-25 04:48:38,684 | INFO     | neventsw: 0
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | pid: 16665
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | pgrp: 16665
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | corecount: 8
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | event service: False
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | sizes: {0: 2393566, 1: 2393765, 7: 2393971, 12: 2393999, 15786: 2424593, 15787: 2424592, 15792: 2433717, 15794: 2433773, 15885: 2433943}
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | --------------------------------------------------
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | 
[2025-05-25 06:48:57] 2025-05-25 04:48:38,685 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-25 06:48:57] 2025-05-25 04:48:38,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | job 6665629877 has completed (purged errors)
[2025-05-25 06:48:57] 2025-05-25 04:48:38,715 | INFO     | overall cleanup function is called
[2025-05-25 06:48:57] 2025-05-25 04:48:39,724 | INFO     | --- collectZombieJob: --- 10, [16665]
[2025-05-25 06:48:57] 2025-05-25 04:48:39,724 | INFO     | zombie collector waiting for pid 16665
[2025-05-25 06:48:57] 2025-05-25 04:48:39,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 06:48:57] 2025-05-25 04:48:39,725 | INFO     | collected zombie processes
[2025-05-25 06:48:57] 2025-05-25 04:48:39,725 | INFO     | will attempt to kill all subprocesses of pid=16665
[2025-05-25 06:48:57] 2025-05-25 04:48:39,831 | INFO     | process IDs to be killed: [16665] (in reverse order)
[2025-05-25 06:48:57] 2025-05-25 04:48:39,886 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 06:48:57] 2025-05-25 04:48:39,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 06:48:57] 2025-05-25 04:48:39,890 | INFO     | did not find any defunct processes belonging to 16665
[2025-05-25 06:48:57] 2025-05-25 04:48:39,893 | INFO     | did not find any defunct processes belonging to 16665
[2025-05-25 06:48:57] 2025-05-25 04:48:39,894 | INFO     | ready for new job
[2025-05-25 06:48:57] 2025-05-25 04:48:39,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 06:48:57] 2025-05-25 04:48:39,895 | INFO     | **************************************
[2025-05-25 06:48:57] 2025-05-25 04:48:39,896 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 06:48:57] 2025-05-25 04:48:39,896 | INFO     | **************************************
[2025-05-25 06:48:57] 2025-05-25 04:48:39,896 | INFO     | 
[2025-05-25 06:48:57] 2025-05-25 04:48:39,896 | INFO     | pilot is running in a VM
[2025-05-25 06:48:57] 2025-05-25 04:48:39,897 | INFO     | architecture information:
[2025-05-25 06:48:57] 2025-05-25 04:48:39,897 | INFO     | executing command: cat /etc/os-release
[2025-05-25 06:48:57] 2025-05-25 04:48:39,913 | INFO     | cat /etc/os-release:
[2025-05-25 06:48:57] NAME="CentOS Linux"
[2025-05-25 06:48:57] VERSION="7 (Core)"
[2025-05-25 06:48:57] ID="centos"
[2025-05-25 06:48:57] ID_LIKE="rhel fedora"
[2025-05-25 06:48:57] VERSION_ID="7"
[2025-05-25 06:48:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 06:48:57] ANSI_COLOR="0;31"
[2025-05-25 06:48:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 06:48:57] HOME_URL="https://www.centos.org/"
[2025-05-25 06:48:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 06:48:57] 
[2025-05-25 06:48:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 06:48:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 06:48:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 06:48:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 06:48:57] 
[2025-05-25 06:48:57] 2025-05-25 04:48:39,913 | INFO     | **************************************
[2025-05-25 06:48:57] 2025-05-25 04:48:40,417 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-25 06:48:57] 2025-05-25 04:48:40,549 | INFO     | sufficient remaining disk space (495188967424 B)
[2025-05-25 06:48:57] 2025-05-25 04:48:40,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 06:48:57] 2025-05-25 04:48:40,549 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 06:48:57] 2025-05-25 04:48:40,550 | INFO     | update_server=False
[2025-05-25 06:48:57] 2025-05-25 04:48:40,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 06:48:57] 2025-05-25 04:48:40,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:48:57] 2025-05-25 04:48:40,550 | INFO     | aborting loop
[2025-05-25 06:48:57] 2025-05-25 04:48:40,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 06:48:57] 2025-05-25 04:48:40,754 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 06:48:57] 2025-05-25 04:48:40,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 06:48:57] 2025-05-25 04:48:40,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 06:48:57] 2025-05-25 04:48:41,222 | INFO     | all job control threads have been joined
[2025-05-25 06:48:57] 2025-05-25 04:48:41,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 06:48:57] 2025-05-25 04:48:41,414 | INFO     | all data control threads have been joined
[2025-05-25 06:48:57] 2025-05-25 04:48:41,555 | INFO     | [job] retrieve thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:41,556 | INFO     | [job] job monitor thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:41,563 | INFO     | [job] queue monitor thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:41,607 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:41,619 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:41,693 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:41,903 | INFO     | all payload control threads have been joined
[2025-05-25 06:48:57] 2025-05-25 04:48:42,080 | INFO     | [payload] failed_post thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:42,228 | INFO     | [job] control thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:42,265 | INFO     | [payload] validate_post thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:42,420 | INFO     | [data] control thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:42,473 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:42,818 | INFO     | [data] copytool_in thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:42,909 | INFO     | [payload] control thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:43,019 | INFO     | [job] validate thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:43,259 | INFO     | [data] copytool_out thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:43,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 06:48:57] 2025-05-25 04:48:47,908 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 06:48:57] 2025-05-25 04:48:49,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664395609920)>', '<ExcThread(monitor, started 139664098825984)>']
[2025-05-25 06:48:57] 2025-05-25 04:48:49,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 06:48:57] 2025-05-25 04:48:49,808 | INFO     | [monitor] control thread has ended
[2025-05-25 06:48:57] 2025-05-25 04:48:54,229 | INFO     | all workflow threads have been joined
[2025-05-25 06:48:57] 2025-05-25 04:48:54,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 06:48:57] 2025-05-25 04:48:54,230 | INFO     | traces error code: 0
[2025-05-25 06:48:57] 2025-05-25 04:48:54,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 06:48:57] 2025-05-25 04:48:54,494 [wrapper] ==== pilot stdout END ====
[2025-05-25 06:48:57] 2025-05-25 04:48:54,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 06:48:57] 2025-05-25 04:48:54,678 [wrapper] pilotpid: 9421
[2025-05-25 06:48:57] 2025-05-25 04:48:54,785 [wrapper] Pilot exit status: 0
[2025-05-25 06:48:57] 2025-05-25 04:48:55,116 [wrapper] pandaids: 6665629877
[2025-05-25 06:48:57] 2025-05-25 04:48:55,155 [wrapper] cleanup supervisor_pilot 29449 9422
[2025-05-25 06:48:57] 2025-05-25 04:48:55,171 [wrapper] Test setup, not cleaning
[2025-05-25 06:48:57] 2025-05-25 04:48:55,180 [wrapper] apfmon messages muted
[2025-05-25 06:48:57] 2025-05-25 04:48:55,189 [wrapper] ==== wrapper stdout END ====
[2025-05-25 06:48:57] 2025-05-25 04:48:55,202 [wrapper] ==== wrapper stderr END ====
[2025-05-25 06:48:57]  *** Error codes and diagnostics ***
[2025-05-25 06:48:57]     "exeErrorCode": 0,
[2025-05-25 06:48:57]     "exeErrorDiag": "",
[2025-05-25 06:48:57]     "pilotErrorCode": 0,
[2025-05-25 06:48:57]     "pilotErrorDiag": "",
[2025-05-25 06:48:57]  *** Listing of results directory ***
[2025-05-25 06:48:57] total 409616
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc    495897 May 24 15:46 pilot3.tar.gz
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc      5111 May 24 16:11 queuedata.json
[2025-05-25 06:48:57] -rwx------. 1 boinc boinc     37140 May 24 16:12 runpilot2-wrapper.sh
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc       100 May 25 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 06:48:57] -rwxr-xr-x. 1 boinc boinc      7986 May 25 02:23 run_atlas
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc       105 May 25 02:23 job.xml
[2025-05-25 06:48:57] -rw-r--r--. 2 boinc boinc 223463048 May 25 02:23 EVNT.44871834._000747.pool.root.1
[2025-05-25 06:48:57] drwxrwx--x. 2 boinc boinc        68 May 25 02:23 shared
[2025-05-25 06:48:57] -rw-r--r--. 2 boinc boinc    508872 May 25 02:23 input.tar.gz
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc      6371 May 25 02:23 init_data.xml
[2025-05-25 06:48:57] -rw-r--r--. 2 boinc boinc     15093 May 25 02:23 start_atlas.sh
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc         0 May 25 02:23 boinc_lockfile
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc      2557 May 25 02:23 pandaJob.out
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc    990811 May 25 02:23 agis_schedconf.cvmfs.json
[2025-05-25 06:48:57] drwx------. 4 boinc boinc      4096 May 25 02:23 pilot3
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc 188659025 May 25 06:46 HITS.44871837._018723.pool.root.1
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc       531 May 25 06:46 boinc_task_state.xml
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc      1015 May 25 06:46 memory_monitor_summary.json
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc   1596740 May 25 06:47 agis_ddmendpoints.agis.ALL.json
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc    388282 May 25 06:47 log.44871837._018723.job.log.tgz.1
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc        95 May 25 06:47 pilot_heartbeat.json
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc      7685 May 25 06:48 heartbeat.json
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc      4416 May 25 06:48 pilotlog.txt
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc   1368902 May 25 06:48 log.44871837._018723.job.log.1
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc       357 May 25 06:48 output.list
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc       620 May 25 06:48 runtime_log
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc   1771520 May 25 06:48 result.tar.gz
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc      8659 May 25 06:48 runtime_log.err
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc       656 May 25 06:48 80TLDm2m4c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsfRKDmzNBbUo.diag
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc      8192 May 25 06:48 boinc_mmap_file
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc        28 May 25 06:48 wrapper_checkpoint.txt
[2025-05-25 06:48:57] -rw-r--r--. 1 boinc boinc     20252 May 25 06:48 stderr.txt
[2025-05-25 06:48:57] HITS file was successfully produced:
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc 188659025 May 25 06:46 shared/HITS.pool.root.1
[2025-05-25 06:48:57]  *** Contents of shared directory: ***
[2025-05-25 06:48:57] total 404716
[2025-05-25 06:48:57] -rw-r--r--. 2 boinc boinc 223463048 May 25 02:23 ATLAS.root_0
[2025-05-25 06:48:57] -rw-r--r--. 2 boinc boinc    508872 May 25 02:23 input.tar.gz
[2025-05-25 06:48:57] -rw-r--r--. 2 boinc boinc     15093 May 25 02:23 start_atlas.sh
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc 188659025 May 25 06:46 HITS.pool.root.1
[2025-05-25 06:48:57] -rw-------. 1 boinc boinc   1771520 May 25 06:48 result.tar.gz
06:48:59 (5766): run_atlas exited; CPU time 61875.252289
06:48:59 (5766): called boinc_finish(0)

</stderr_txt>
]]>

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