Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:18 (3452974): wrapper (7.7.26015): starting
15:22:18 (3452974): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 15:22:18] Arguments: --nthreads 8
[2025-05-24 15:22:18] Threads: 8
[2025-05-24 15:22:18] Checking for CVMFS
[2025-05-24 15:22:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 15:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 15:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 15:22:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 15:22:20] 2.12.6.0 676006 8302 296400 146377 1 658 31934845 32503808 49178 16776704 0 97365059 99.641 82824222 36093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 15:22:20] CVMFS is ok
[2025-05-24 15:22:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 15:22:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 15:22:20] Further information can be found at the LHC@home message board.
[2025-05-24 15:22:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 15:22:20] Checking for apptainer binary...
[2025-05-24 15:22:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 15:22:20] Running /usr/bin/apptainer --version
[2025-05-24 15:22:20] apptainer version 1.4.1-1.el9
[2025-05-24 15:22:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 15:22:21] c8-7-2.aglt2.org
[2025-05-24 15:22:21] apptainer works
[2025-05-24 15:22:21] Set ATHENA_PROC_NUMBER=8
[2025-05-24 15:22:21] Set ATHENA_CORE_NUMBER=8
[2025-05-24 15:22:21] Starting ATLAS job with PandaID=6665629552
[2025-05-24 15:22:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 18:43:35]  *** The last 200 lines of the pilot log: ***
[2025-05-24 18:43:35] 2025-05-24 22:43:15,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 18:43:35] 2025-05-24 22:43:15,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 18:43:35] 2025-05-24 22:43:15,327 | INFO     | fitting pss+swap vs Time
[2025-05-24 18:43:35] 2025-05-24 22:43:15,327 | INFO     | sum of square deviations: 2229146912.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | sum of deviations: 21288816268.000004
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | mean x: 1748120683.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | mean y: 2139241.279792746
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | -- intersect: -16692776573.527515
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | intersect: -16692776573.527515
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | chi2: 4.3271737912293196
[2025-05-24 18:43:35] 2025-05-24 22:43:15,328 | INFO     | sum of square deviations: 2060343747.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | sum of deviations: 35165891250.49999
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | mean x: 1748120530.5
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | mean y: 2151582.7712765955
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | -- intersect: -29834722267.93445
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | intersect: -29834722267.93445
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | chi2: 3.6735351388616335
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | current chi2=3.6735351388616335 (change=15.105440268947273 %)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,333 | INFO     | right removable region: 187
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | sum of square deviations: 2060343747.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | sum of deviations: -24941551991.5
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | mean x: 1748120835.5
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | mean y: 2180855.335106383
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | -- intersect: 21164109183.815952
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | intersect: 21164109183.815952
[2025-05-24 18:43:35] 2025-05-24 22:43:15,334 | INFO     | chi2: 1.2012100751112602
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | current chi2=1.2012100751112602 (change=72.24030896226138 %)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | sum of square deviations: 1900284932.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | sum of deviations: -38192565003.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | mean x: 1748120988.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | mean y: 2193418.912568306
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | -- intersect: 35136516352.8054
[2025-05-24 18:43:35] 2025-05-24 22:43:15,335 | INFO     | intersect: 35136516352.8054
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | chi2: 0.8750109097034992
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | current chi2=0.8750109097034992 (change=27.15587990531526 %)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | sum of square deviations: 1748737904.5
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | sum of deviations: -33823586311.500008
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | mean x: 1748121140.5
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | mean y: 2188955.8595505618
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | -- intersect: 33813845995.206112
[2025-05-24 18:43:35] 2025-05-24 22:43:15,336 | INFO     | intersect: 33813845995.206112
[2025-05-24 18:43:35] 2025-05-24 22:43:15,337 | INFO     | chi2: 0.8389916657036229
[2025-05-24 18:43:35] 2025-05-24 22:43:15,341 | INFO     | current chi2=0.8389916657036229 (change=4.116433703904501 %)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,341 | INFO     | left removable region: 30
[2025-05-24 18:43:35] 2025-05-24 22:43:15,341 | INFO     | sum of square deviations: 1199940638.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,341 | INFO     | sum of deviations: -6537478396.999998
[2025-05-24 18:43:35] 2025-05-24 22:43:15,341 | INFO     | mean x: 1748121415.0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | mean y: 2187949.382165605
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | -- intersect: 9526247410.309906
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | intersect: 9526247410.309906
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | chi2: 0.09028547912738376
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | -- intersect: 9526247410.309906
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | current memory leak: -5.45 B/s (using 157 data points, chi2=0.09)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | ..............................
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | . Timing measurements:
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | . get job = 0 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | . initial setup = 5 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | . payload setup = 86 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,342 | INFO     | . stage-in = 0 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,343 | INFO     | . payload execution = 11771 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,343 | INFO     | . stage-out = 3 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,343 | INFO     | . log creation = 0 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,343 | INFO     | ..............................
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | 
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | job summary report
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | --------------------------------------------------
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | PanDA job id: 6665629552
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | task id: 44871837
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | errors: (none)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | pilot state: finished 
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | transexitcode: 0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | exeerrorcode: 0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | exeerrordiag: 
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | exitcode: 0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,814 | INFO     | exitmsg: OK
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | cpuconsumptiontime: 28650 s
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | nevents: 400
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | neventsw: 0
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | pid: 3539503
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | pgrp: 3539503
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | corecount: 8
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | event service: False
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | sizes: {0: 2393568, 1: 2393767, 12: 2393767, 23: 2393795, 33: 2393823, 36: 2394085, 44: 2394241, 11862: 2423328, 11865: 2432269, 11868: 2432325, 11898: 2432495}
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | --------------------------------------------------
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | 
[2025-05-24 18:43:35] 2025-05-24 22:43:15,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-05-24 18:43:35] 2025-05-24 22:43:15,866 | INFO     | PID=3474092 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 18:43:35] 2025-05-24 22:43:15,866 | INFO     | .. there are 82 such processes running
[2025-05-24 18:43:35] 2025-05-24 22:43:15,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | job 6665629552 has completed (purged errors)
[2025-05-24 18:43:35] 2025-05-24 22:43:15,922 | INFO     | overall cleanup function is called
[2025-05-24 18:43:35] 2025-05-24 22:43:16,934 | INFO     | --- collectZombieJob: --- 10, [3539503]
[2025-05-24 18:43:35] 2025-05-24 22:43:16,934 | INFO     | zombie collector waiting for pid 3539503
[2025-05-24 18:43:35] 2025-05-24 22:43:16,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 18:43:35] 2025-05-24 22:43:16,934 | INFO     | collected zombie processes
[2025-05-24 18:43:35] 2025-05-24 22:43:16,934 | INFO     | will attempt to kill all subprocesses of pid=3539503
[2025-05-24 18:43:35] 2025-05-24 22:43:19,117 | INFO     | process IDs to be killed: [3539503] (in reverse order)
[2025-05-24 18:43:35] 2025-05-24 22:43:19,487 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 18:43:35] 2025-05-24 22:43:19,487 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 18:43:35] 2025-05-24 22:43:19,575 | INFO     | did not find any defunct processes belonging to 3539503
[2025-05-24 18:43:35] 2025-05-24 22:43:19,743 | INFO     | did not find any defunct processes belonging to 3539503
[2025-05-24 18:43:35] 2025-05-24 22:43:19,743 | INFO     | ready for new job
[2025-05-24 18:43:35] 2025-05-24 22:43:19,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 18:43:35] 2025-05-24 22:43:19,744 | INFO     | **************************************
[2025-05-24 18:43:35] 2025-05-24 22:43:19,744 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 18:43:35] 2025-05-24 22:43:19,744 | INFO     | **************************************
[2025-05-24 18:43:35] 2025-05-24 22:43:19,744 | INFO     | 
[2025-05-24 18:43:35] 2025-05-24 22:43:19,750 | INFO     | architecture information:
[2025-05-24 18:43:35] 2025-05-24 22:43:19,770 | INFO     | executing command: cat /etc/os-release
[2025-05-24 18:43:35] 2025-05-24 22:43:19,858 | INFO     | cat /etc/os-release:
[2025-05-24 18:43:35] NAME="CentOS Linux"
[2025-05-24 18:43:35] VERSION="7 (Core)"
[2025-05-24 18:43:35] ID="centos"
[2025-05-24 18:43:35] ID_LIKE="rhel fedora"
[2025-05-24 18:43:35] VERSION_ID="7"
[2025-05-24 18:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 18:43:35] ANSI_COLOR="0;31"
[2025-05-24 18:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 18:43:35] HOME_URL="https://www.centos.org/"
[2025-05-24 18:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 18:43:35] 
[2025-05-24 18:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 18:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 18:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 18:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 18:43:35] 
[2025-05-24 18:43:35] 2025-05-24 22:43:19,858 | INFO     | **************************************
[2025-05-24 18:43:35] 2025-05-24 22:43:20,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-05-24 18:43:35] 2025-05-24 22:43:20,408 | INFO     | sufficient remaining disk space (92653223936 B)
[2025-05-24 18:43:35] 2025-05-24 22:43:20,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 18:43:35] 2025-05-24 22:43:20,408 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 18:43:35] 2025-05-24 22:43:20,408 | INFO     | update_server=False
[2025-05-24 18:43:35] 2025-05-24 22:43:20,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 18:43:35] 2025-05-24 22:43:20,427 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 18:43:35] 2025-05-24 22:43:20,427 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 18:43:35] 2025-05-24 22:43:20,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 18:43:35] 2025-05-24 22:43:20,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 18:43:35] 2025-05-24 22:43:20,521 | INFO     | all payload control threads have been joined
[2025-05-24 18:43:35] 2025-05-24 22:43:20,619 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 18:43:35] 2025-05-24 22:43:20,619 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 18:43:35] 2025-05-24 22:43:20,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 18:43:35] 2025-05-24 22:43:20,619 | INFO     | will abort loop
[2025-05-24 18:43:35] 2025-05-24 22:43:20,665 | INFO     | all job control threads have been joined
[2025-05-24 18:43:35] 2025-05-24 22:43:20,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 18:43:35] 2025-05-24 22:43:21,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 18:43:35] 2025-05-24 22:43:21,414 | INFO     | [job] retrieve thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:21,514 | INFO     | all data control threads have been joined
[2025-05-24 18:43:35] 2025-05-24 22:43:21,517 | INFO     | [job] validate thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:21,527 | INFO     | [payload] control thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:21,553 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:21,626 | INFO     | [job] job monitor thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:21,671 | INFO     | [job] control thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:21,846 | INFO     | [job] queue monitor thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,145 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,164 | INFO     | [data] copytool_in thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,164 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,230 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,522 | INFO     | [data] control thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,544 | INFO     | [payload] failed_post thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:22,769 | INFO     | [payload] validate_post thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:23,291 | INFO     | [data] copytool_out thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:23,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 18:43:35] 2025-05-24 22:43:27,961 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 18:43:35] 2025-05-24 22:43:29,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605324740416)>', '<ExcThread(monitor, started 140604965099264)>']
[2025-05-24 18:43:35] 2025-05-24 22:43:30,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 18:43:35] 2025-05-24 22:43:30,506 | INFO     | [monitor] control thread has ended
[2025-05-24 18:43:35] 2025-05-24 22:43:34,771 | INFO     | all workflow threads have been joined
[2025-05-24 18:43:35] 2025-05-24 22:43:34,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 18:43:35] 2025-05-24 22:43:34,771 | INFO     | traces error code: 0
[2025-05-24 18:43:35] 2025-05-24 22:43:34,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 18:43:35] 2025-05-24 22:43:34,975 [wrapper] ==== pilot stdout END ====
[2025-05-24 18:43:35] 2025-05-24 22:43:34,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 18:43:35] 2025-05-24 22:43:34,979 [wrapper] pilotpid: 3474092
[2025-05-24 18:43:35] 2025-05-24 22:43:34,982 [wrapper] Pilot exit status: 0
[2025-05-24 18:43:35] 2025-05-24 22:43:35,058 [wrapper] pandaids: 6665629552
[2025-05-24 18:43:35] 2025-05-24 22:43:35,210 [wrapper] cleanup supervisor_pilot 3697475 3474093
[2025-05-24 18:43:35] 2025-05-24 22:43:35,254 [wrapper] Test setup, not cleaning
[2025-05-24 18:43:35] 2025-05-24 22:43:35,292 [wrapper] apfmon messages muted
[2025-05-24 18:43:35] 2025-05-24 22:43:35,394 [wrapper] ==== wrapper stdout END ====
[2025-05-24 18:43:35] 2025-05-24 22:43:35,407 [wrapper] ==== wrapper stderr END ====
[2025-05-24 18:43:35]  *** Error codes and diagnostics ***
[2025-05-24 18:43:35]     "exeErrorCode": 0,
[2025-05-24 18:43:35]     "exeErrorDiag": "",
[2025-05-24 18:43:35]     "pilotErrorCode": 0,
[2025-05-24 18:43:35]     "pilotErrorDiag": "",
[2025-05-24 18:43:35]  *** Listing of results directory ***
[2025-05-24 18:43:35] total 425584
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas    495897 May 24 09:46 pilot3.tar.gz
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas      5111 May 24 10:05 queuedata.json
[2025-05-24 18:43:35] -rwx------. 1 boincer umatlas     37140 May 24 10:05 runpilot2-wrapper.sh
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas       100 May 24 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 18:43:35] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 15:22 run_atlas
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas       105 May 24 15:22 job.xml
[2025-05-24 18:43:35] -rw-r--r--. 2 boincer umatlas 225490067 May 24 15:22 EVNT.44871834._000739.pool.root.1
[2025-05-24 18:43:35] -rw-r--r--. 2 boincer umatlas     15093 May 24 15:22 start_atlas.sh
[2025-05-24 18:43:35] drwxrwx--x. 2 boincer umatlas      4096 May 24 15:22 shared
[2025-05-24 18:43:35] -rw-r--r--. 2 boincer umatlas    508873 May 24 15:22 input.tar.gz
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas         0 May 24 15:22 boinc_lockfile
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas      2558 May 24 15:22 pandaJob.out
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas    988564 May 24 15:23 agis_schedconf.cvmfs.json
[2025-05-24 18:43:35] drwx------. 4 boincer umatlas      4096 May 24 15:23 pilot3
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas      7159 May 24 18:39 init_data.xml
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas 203773846 May 24 18:41 HITS.44871837._018533.pool.root.1
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas       531 May 24 18:41 boinc_task_state.xml
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas        95 May 24 18:42 pilot_heartbeat.json
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas      1039 May 24 18:42 memory_monitor_summary.json
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas   1596740 May 24 18:42 agis_ddmendpoints.agis.ALL.json
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas    370958 May 24 18:42 log.44871837._018533.job.log.tgz.1
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas      7700 May 24 18:43 heartbeat.json
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas        28 May 24 18:43 wrapper_checkpoint.txt
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas      8192 May 24 18:43 boinc_mmap_file
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas      4662 May 24 18:43 pilotlog.txt
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas    986033 May 24 18:43 log.44871837._018533.job.log.1
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas       357 May 24 18:43 output.list
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas       620 May 24 18:43 runtime_log
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas   1372160 May 24 18:43 result.tar.gz
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas       653 May 24 18:43 zDPLDmdg4c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpeRKDmaQbu0m.diag
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas      8650 May 24 18:43 runtime_log.err
[2025-05-24 18:43:35] -rw-r--r--. 1 boincer umatlas     20109 May 24 18:43 stderr.txt
[2025-05-24 18:43:35] HITS file was successfully produced:
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas 203773846 May 24 18:41 shared/HITS.pool.root.1
[2025-05-24 18:43:35]  *** Contents of shared directory: ***
[2025-05-24 18:43:35] total 421068
[2025-05-24 18:43:35] -rw-r--r--. 2 boincer umatlas 225490067 May 24 15:22 ATLAS.root_0
[2025-05-24 18:43:35] -rw-r--r--. 2 boincer umatlas     15093 May 24 15:22 start_atlas.sh
[2025-05-24 18:43:35] -rw-r--r--. 2 boincer umatlas    508873 May 24 15:22 input.tar.gz
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas 203773846 May 24 18:41 HITS.pool.root.1
[2025-05-24 18:43:35] -rw-------. 1 boincer umatlas   1372160 May 24 18:43 result.tar.gz
18:43:37 (3452974): run_atlas exited; CPU time 29142.559097
18:43:37 (3452974): called boinc_finish(0)

</stderr_txt>
]]>

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