Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:08 (9434): wrapper (7.7.26015): starting
02:27:08 (9434): wrapper: running run_atlas (--nthreads 8)
[2025-05-25 02:27:08] Arguments: --nthreads 8
[2025-05-25 02:27:08] Threads: 8
[2025-05-25 02:27:08] Checking for CVMFS
[2025-05-25 02:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 02:27:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 02:27:09] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 02:27:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 02:27:09] 2.11.2.0 22062 18268 96936 146384 3 208 17761034 25165825 1678 130560 0 10365958 99.739 12335582 1668 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-25 02:27:09] CVMFS is ok
[2025-05-25 02:27:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 02:27:09] Checking for apptainer binary...
[2025-05-25 02:27:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 02:27:09] Running /usr/bin/apptainer --version
[2025-05-25 02:27:09] apptainer version 1.3.2-1.el7
[2025-05-25 02:27:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 02:27:11] cg-vwn481.simple-grid.lan
[2025-05-25 02:27:11] apptainer works
[2025-05-25 02:27:11] Set ATHENA_PROC_NUMBER=8
[2025-05-25 02:27:11] Set ATHENA_CORE_NUMBER=8
[2025-05-25 02:27:11] Starting ATLAS job with PandaID=6665441833
[2025-05-25 02:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 07:17:32]  *** The last 200 lines of the pilot log: ***
[2025-05-25 07:17:32] 2025-05-25 05:14:40,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:17:32] 2025-05-25 05:14:40,786 | INFO     | fitting pss+swap vs Time
[2025-05-25 07:17:32] 2025-05-25 05:14:40,786 | INFO     | sum of square deviations: 6806862510.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,789 | INFO     | sum of deviations: -31343409027.5
[2025-05-25 07:17:32] 2025-05-25 05:14:40,789 | INFO     | mean x: 1748141426.5
[2025-05-25 07:17:32] 2025-05-25 05:14:40,789 | INFO     | mean y: 2518972.225
[2025-05-25 07:17:32] 2025-05-25 05:14:40,789 | INFO     | -- intersect: 8052147077.421859
[2025-05-25 07:17:32] 2025-05-25 05:14:40,789 | INFO     | intersect: 8052147077.421859
[2025-05-25 07:17:32] 2025-05-25 05:14:40,790 | INFO     | chi2: 2.587715385676302
[2025-05-25 07:17:32] 2025-05-25 05:14:40,790 | INFO     | sum of square deviations: 6448679050.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | sum of deviations: -12091992911.999998
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | mean x: 1748141274.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | mean y: 2527053.5636363635
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | -- intersect: 3280487040.4826083
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | intersect: 3280487040.4826083
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | chi2: 1.8162104162388306
[2025-05-25 07:17:32] 2025-05-25 05:14:40,793 | INFO     | current chi2=1.8162104162388306 (change=29.814135422618666 %)
[2025-05-25 07:17:32] 2025-05-25 05:14:40,794 | INFO     | sum of square deviations: 6103286527.5
[2025-05-25 07:17:32] 2025-05-25 05:14:40,796 | INFO     | sum of deviations: -11839741106.499994
[2025-05-25 07:17:32] 2025-05-25 05:14:40,796 | INFO     | mean x: 1748141121.5
[2025-05-25 07:17:32] 2025-05-25 05:14:40,797 | INFO     | mean y: 2527164.951851852
[2025-05-25 07:17:32] 2025-05-25 05:14:40,797 | INFO     | -- intersect: 3393739129.674174
[2025-05-25 07:17:32] 2025-05-25 05:14:40,797 | INFO     | intersect: 3393739129.674174
[2025-05-25 07:17:32] 2025-05-25 05:14:40,797 | INFO     | chi2: 1.8156545015818248
[2025-05-25 07:17:32] 2025-05-25 05:14:40,797 | INFO     | current chi2=1.8156545015818248 (change=0.030608494039859713 %)
[2025-05-25 07:17:32] 2025-05-25 05:14:40,797 | INFO     | right removable region: 269
[2025-05-25 07:17:32] 2025-05-25 05:14:40,798 | INFO     | sum of square deviations: 6448679050.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,800 | INFO     | sum of deviations: -77795347709.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,800 | INFO     | mean x: 1748141579.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,801 | INFO     | mean y: 2538600.810909091
[2025-05-25 07:17:32] 2025-05-25 05:14:40,801 | INFO     | -- intersect: 21091707549.73934
[2025-05-25 07:17:32] 2025-05-25 05:14:40,801 | INFO     | intersect: 21091707549.73934
[2025-05-25 07:17:32] 2025-05-25 05:14:40,801 | INFO     | chi2: 1.0153032903961359
[2025-05-25 07:17:32] 2025-05-25 05:14:40,801 | INFO     | current chi2=1.0153032903961359 (change=60.764491488665584 %)
[2025-05-25 07:17:32] 2025-05-25 05:14:40,802 | INFO     | sum of square deviations: 6103286527.5
[2025-05-25 07:17:32] 2025-05-25 05:14:40,809 | INFO     | sum of deviations: -73182689481.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,809 | INFO     | mean x: 1748141731.5
[2025-05-25 07:17:32] 2025-05-25 05:14:40,809 | INFO     | mean y: 2536546.422222222
[2025-05-25 07:17:32] 2025-05-25 05:14:40,810 | INFO     | -- intersect: 20963982962.005432
[2025-05-25 07:17:32] 2025-05-25 05:14:40,810 | INFO     | intersect: 20963982962.005432
[2025-05-25 07:17:32] 2025-05-25 05:14:40,810 | INFO     | chi2: 1.0048390304049486
[2025-05-25 07:17:32] 2025-05-25 05:14:40,810 | INFO     | current chi2=1.0048390304049486 (change=1.030653607662838 %)
[2025-05-25 07:17:32] 2025-05-25 05:14:40,810 | INFO     | left removable region: 20
[2025-05-25 07:17:32] 2025-05-25 05:14:40,811 | INFO     | sum of square deviations: 4787066500.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,813 | INFO     | sum of deviations: -36803038560.99999
[2025-05-25 07:17:32] 2025-05-25 05:14:40,813 | INFO     | mean x: 1748141701.0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,813 | INFO     | mean y: 2537731.2811244978
[2025-05-25 07:17:32] 2025-05-25 05:14:40,813 | INFO     | -- intersect: 13442277169.201012
[2025-05-25 07:17:32] 2025-05-25 05:14:40,813 | INFO     | intersect: 13442277169.201012
[2025-05-25 07:17:32] 2025-05-25 05:14:40,813 | INFO     | chi2: 0.18438580021466586
[2025-05-25 07:17:32] 2025-05-25 05:14:40,814 | INFO     | -- intersect: 13442277169.201012
[2025-05-25 07:17:32] 2025-05-25 05:14:40,814 | INFO     | current memory leak: -7.69 B/s (using 249 data points, chi2=0.18)
[2025-05-25 07:17:32] 2025-05-25 05:14:40,814 | INFO     | ..............................
[2025-05-25 07:17:32] 2025-05-25 05:14:40,814 | INFO     | . Timing measurements:
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . get job = 0 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . initial setup = 2 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . payload setup = 15 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . stage-in = 0 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . payload execution = 17104 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . stage-out = 2 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | . log creation = 0 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,815 | INFO     | ..............................
[2025-05-25 07:17:32] 2025-05-25 05:14:40,941 | INFO     | 
[2025-05-25 07:17:32] 2025-05-25 05:14:40,941 | INFO     | job summary report
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | --------------------------------------------------
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | PanDA job id: 6665441833
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | task id: 44871837
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | errors: (none)
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | pilot state: finished 
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | transexitcode: 0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | exeerrorcode: 0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | exeerrordiag: 
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | exitcode: 0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | exitmsg: OK
[2025-05-25 07:17:32] 2025-05-25 05:14:40,942 | INFO     | cpuconsumptiontime: 64623 s
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | nevents: 400
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | neventsw: 0
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | pid: 21570
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | pgrp: 21570
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | corecount: 8
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | event service: False
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | sizes: {0: 2393568, 1: 2393767, 9: 2393973, 12: 2394001, 17124: 2425000, 17127: 2433943, 17128: 2434127, 17212: 2434297}
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | --------------------------------------------------
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | 
[2025-05-25 07:17:32] 2025-05-25 05:14:40,943 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-05-25 07:17:32] 2025-05-25 05:14:41,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 07:17:32] 2025-05-25 05:14:41,390 | INFO     | job 6665441833 has completed (purged errors)
[2025-05-25 07:17:32] 2025-05-25 05:14:41,390 | INFO     | overall cleanup function is called
[2025-05-25 07:17:32] 2025-05-25 05:14:42,399 | INFO     | --- collectZombieJob: --- 10, [21570]
[2025-05-25 07:17:32] 2025-05-25 05:14:42,399 | INFO     | zombie collector waiting for pid 21570
[2025-05-25 07:17:32] 2025-05-25 05:14:42,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 07:17:32] 2025-05-25 05:14:42,399 | INFO     | collected zombie processes
[2025-05-25 07:17:32] 2025-05-25 05:14:42,399 | INFO     | will attempt to kill all subprocesses of pid=21570
[2025-05-25 07:17:32] 2025-05-25 05:14:42,491 | INFO     | process IDs to be killed: [21570] (in reverse order)
[2025-05-25 07:17:32] 2025-05-25 05:14:43,274 | INFO     | PID=13130 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-25 07:17:32] 2025-05-25 05:14:43,275 | INFO     | .. there are 9 such processes running
[2025-05-25 07:17:32] 2025-05-25 05:14:43,346 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 07:17:32] 2025-05-25 05:14:43,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 07:17:32] 2025-05-25 05:14:43,349 | INFO     | did not find any defunct processes belonging to 21570
[2025-05-25 07:17:32] 2025-05-25 05:14:43,352 | INFO     | did not find any defunct processes belonging to 21570
[2025-05-25 07:17:32] 2025-05-25 05:14:43,352 | INFO     | ready for new job
[2025-05-25 07:17:32] 2025-05-25 05:14:43,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 07:17:32] 2025-05-25 05:14:43,354 | INFO     | **************************************
[2025-05-25 07:17:32] 2025-05-25 05:14:43,354 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 07:17:32] 2025-05-25 05:14:43,354 | INFO     | **************************************
[2025-05-25 07:17:32] 2025-05-25 05:14:43,354 | INFO     | 
[2025-05-25 07:17:32] 2025-05-25 05:14:43,354 | INFO     | pilot is running in a VM
[2025-05-25 07:17:32] 2025-05-25 05:14:43,355 | INFO     | architecture information:
[2025-05-25 07:17:32] 2025-05-25 05:14:43,362 | INFO     | executing command: cat /etc/os-release
[2025-05-25 07:17:32] 2025-05-25 05:14:43,667 | INFO     | cat /etc/os-release:
[2025-05-25 07:17:32] NAME="CentOS Linux"
[2025-05-25 07:17:32] VERSION="7 (Core)"
[2025-05-25 07:17:32] ID="centos"
[2025-05-25 07:17:32] ID_LIKE="rhel fedora"
[2025-05-25 07:17:32] VERSION_ID="7"
[2025-05-25 07:17:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 07:17:32] ANSI_COLOR="0;31"
[2025-05-25 07:17:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 07:17:32] HOME_URL="https://www.centos.org/"
[2025-05-25 07:17:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 07:17:32] 
[2025-05-25 07:17:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 07:17:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 07:17:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 07:17:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 07:17:32] 
[2025-05-25 07:17:32] 2025-05-25 05:14:43,668 | INFO     | **************************************
[2025-05-25 07:17:32] 2025-05-25 05:14:44,171 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-05-25 07:17:32] 2025-05-25 05:14:44,283 | INFO     | sufficient remaining disk space (496685285376 B)
[2025-05-25 07:17:32] 2025-05-25 05:14:44,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 07:17:32] 2025-05-25 05:14:44,284 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 07:17:32] 2025-05-25 05:14:44,284 | INFO     | update_server=False
[2025-05-25 07:17:32] 2025-05-25 05:14:44,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 07:17:32] 2025-05-25 05:14:44,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 07:17:32] 2025-05-25 05:14:44,621 | INFO     | all job control threads have been joined
[2025-05-25 07:17:32] 2025-05-25 05:14:44,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-25 07:17:32] 2025-05-25 05:14:44,781 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-25 07:17:32] 2025-05-25 05:14:44,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:17:32] 2025-05-25 05:14:44,781 | INFO     | will abort loop
[2025-05-25 07:17:32] 2025-05-25 05:14:45,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 07:17:32] 2025-05-25 05:14:45,122 | INFO     | all payload control threads have been joined
[2025-05-25 07:17:32] 2025-05-25 05:14:45,282 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 07:17:32] 2025-05-25 05:14:45,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 07:17:32] 2025-05-25 05:14:45,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 07:17:32] 2025-05-25 05:14:45,290 | INFO     | [job] retrieve thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:45,337 | INFO     | all data control threads have been joined
[2025-05-25 07:17:32] 2025-05-25 05:14:45,627 | INFO     | [job] control thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:45,787 | INFO     | [job] job monitor thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:45,849 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:45,927 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:45,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:17:32] 2025-05-25 05:14:45,964 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,128 | INFO     | [payload] control thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,140 | INFO     | [job] validate thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,151 | INFO     | [payload] validate_post thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,343 | INFO     | [data] control thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,732 | INFO     | [data] copytool_in thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,838 | INFO     | [payload] failed_post thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:46,965 | INFO     | [job] queue monitor thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:47,102 | INFO     | [data] copytool_out thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:48,294 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:54,390 | INFO     | job.realtimelogging is not enabled
[2025-05-25 07:17:32] 2025-05-25 05:14:55,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 07:17:32] 2025-05-25 05:14:56,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065300477760)>', '<ExcThread(monitor, started 140064696813312)>']
[2025-05-25 07:17:32] 2025-05-25 05:14:57,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 07:17:32] 2025-05-25 05:14:57,354 | INFO     | [monitor] control thread has ended
[2025-05-25 07:17:32] 2025-05-25 05:15:01,853 | INFO     | all workflow threads have been joined
[2025-05-25 07:17:32] 2025-05-25 05:15:01,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 07:17:32] 2025-05-25 05:15:01,853 | INFO     | traces error code: 0
[2025-05-25 07:17:32] 2025-05-25 05:15:01,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 07:17:32] 2025-05-25 05:15:02,393 [wrapper] ==== pilot stdout END ====
[2025-05-25 07:17:32] 2025-05-25 05:15:02,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 07:17:32] 2025-05-25 05:15:02,549 [wrapper] pilotpid: 13130
[2025-05-25 07:17:32] 2025-05-25 05:15:02,657 [wrapper] Pilot exit status: 0
[2025-05-25 07:17:32] 2025-05-25 05:15:03,177 [wrapper] pandaids: 6665441833
[2025-05-25 07:17:32] 2025-05-25 05:15:03,889 [wrapper] cleanup supervisor_pilot 17772 13131
[2025-05-25 07:17:32] 2025-05-25 05:15:03,970 [wrapper] Test setup, not cleaning
[2025-05-25 07:17:32] 2025-05-25 05:15:04,078 [wrapper] apfmon messages muted
[2025-05-25 07:17:32] 2025-05-25 05:15:04,159 [wrapper] ==== wrapper stdout END ====
[2025-05-25 07:17:32] 2025-05-25 05:15:04,204 [wrapper] ==== wrapper stderr END ====
[2025-05-25 07:17:32]  *** Error codes and diagnostics ***
[2025-05-25 07:17:32]     "exeErrorCode": 0,
[2025-05-25 07:17:32]     "exeErrorDiag": "",
[2025-05-25 07:17:32]     "pilotErrorCode": 0,
[2025-05-25 07:17:32]     "pilotErrorDiag": "",
[2025-05-25 07:17:32]  *** Listing of results directory ***
[2025-05-25 07:17:32] total 415868
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc    495897 May 24 15:37 pilot3.tar.gz
[2025-05-25 07:17:32] -rwx------. 1 boinc boinc     37140 May 24 15:38 runpilot2-wrapper.sh
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc      5111 May 24 15:38 queuedata.json
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc       100 May 25 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 07:17:32] -rwxr-xr-x. 1 boinc boinc      7986 May 25 02:27 run_atlas
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc       105 May 25 02:27 job.xml
[2025-05-25 07:17:32] -rw-r--r--. 2 boinc boinc 224098066 May 25 02:27 EVNT.44871834._000725.pool.root.1
[2025-05-25 07:17:32] -rw-r--r--. 2 boinc boinc     15093 May 25 02:27 start_atlas.sh
[2025-05-25 07:17:32] drwxrwx--x. 2 boinc boinc        68 May 25 02:27 shared
[2025-05-25 07:17:32] -rw-r--r--. 2 boinc boinc    508871 May 25 02:27 input.tar.gz
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc      6373 May 25 02:27 init_data.xml
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc         0 May 25 02:27 boinc_lockfile
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc      2557 May 25 02:27 pandaJob.out
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc    990811 May 25 02:27 agis_schedconf.cvmfs.json
[2025-05-25 07:17:32] drwx------. 4 boinc boinc      4096 May 25 02:27 pilot3
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc 194143135 May 25 07:11 HITS.44871837._018121.pool.root.1
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc       531 May 25 07:12 boinc_task_state.xml
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc      1019 May 25 07:13 memory_monitor_summary.json
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc   1596740 May 25 07:13 agis_ddmendpoints.agis.ALL.json
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc    404982 May 25 07:13 log.44871837._018121.job.log.tgz.1
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc        95 May 25 07:14 pilot_heartbeat.json
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc      7689 May 25 07:14 heartbeat.json
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc      4675 May 25 07:15 pilotlog.txt
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc   1490066 May 25 07:15 log.44871837._018121.job.log.1
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc       357 May 25 07:15 output.list
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc       620 May 25 07:15 runtime_log
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc   1914880 May 25 07:15 result.tar.gz
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc      8673 May 25 07:15 runtime_log.err
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc       656 May 25 07:15 QXpLDm6F4c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjaRKDmFqyeom.diag
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc      8192 May 25 07:17 boinc_mmap_file
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc        28 May 25 07:17 wrapper_checkpoint.txt
[2025-05-25 07:17:32] -rw-r--r--. 1 boinc boinc     20497 May 25 07:17 stderr.txt
[2025-05-25 07:17:32] HITS file was successfully produced:
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc 194143135 May 25 07:11 shared/HITS.pool.root.1
[2025-05-25 07:17:32]  *** Contents of shared directory: ***
[2025-05-25 07:17:32] total 410832
[2025-05-25 07:17:32] -rw-r--r--. 2 boinc boinc 224098066 May 25 02:27 ATLAS.root_0
[2025-05-25 07:17:32] -rw-r--r--. 2 boinc boinc     15093 May 25 02:27 start_atlas.sh
[2025-05-25 07:17:32] -rw-r--r--. 2 boinc boinc    508871 May 25 02:27 input.tar.gz
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc 194143135 May 25 07:11 HITS.pool.root.1
[2025-05-25 07:17:32] -rw-------. 1 boinc boinc   1914880 May 25 07:15 result.tar.gz
07:17:34 (9434): run_atlas exited; CPU time 64839.084925
07:17:34 (9434): called boinc_finish(0)

</stderr_txt>
]]>

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