Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:21:26 (2445244): wrapper (7.7.26015): starting
12:21:26 (2445244): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 12:21:26] Arguments: --nthreads 12
[2025-05-24 12:21:26] Threads: 12
[2025-05-24 12:21:26] Checking for CVMFS
[2025-05-24 12:21:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 12:21:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 12:21:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 12:21:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 12:21:26] 2.11.5.0 1946263 8204 229576 146377 3 37 37512628 45568001 14696 130560 0 71072117 99.755 53675677 28272 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 12:21:26] CVMFS is ok
[2025-05-24 12:21:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 12:21:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 12:21:26] Further information can be found at the LHC@home message board.
[2025-05-24 12:21:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 12:21:26] Checking for apptainer binary...
[2025-05-24 12:21:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 12:21:26] Running /usr/bin/apptainer --version
[2025-05-24 12:21:26] apptainer version 1.4.0-1.el9
[2025-05-24 12:21:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 12:21:26] wns0056.triumf.lcg
[2025-05-24 12:21:26] apptainer works
[2025-05-24 12:21:26] Set ATHENA_PROC_NUMBER=12
[2025-05-24 12:21:26] Set ATHENA_CORE_NUMBER=12
[2025-05-24 12:21:26] Starting ATLAS job with PandaID=6665632696
[2025-05-24 12:21:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 12:24:50]  *** The last 200 lines of the pilot log: ***
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | found no stored workdir sizes
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | WARNING  | wrong length of table data, x=[1748114519.0], y=[1032.0] (must be same and length>=4)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | ..............................
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | . Timing measurements:
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . get job = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . initial setup = 3 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . payload setup = 5 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . stage-in = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . payload execution = 21 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . stage-out = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . log creation = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | ..............................
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665632696/pilotlog.txt
[2025-05-24 12:24:50] 2025-05-24 19:24:36,056 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 12:24:50] - Log from pilotlog.txt -
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | INFO     | extracted standard info from prmon json
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | found no stored workdir sizes
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | WARNING  | wrong length of table data, x=[1748114519.0], y=[1032.0] (must be same and length>=4)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | ..............................
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | . Timing measurements:
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . get job = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . initial setup = 3 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . payload setup = 5 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . stage-in = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . payload execution = 21 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . stage-out = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . log creation = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | ..............................
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665632696/pilotlog.txt
[2025-05-24 12:24:50] 2025-05-24 19:24:36,057 | WARNING  | 
[2025-05-24 12:24:50] [begin log extracts]
[2025-05-24 12:24:50] - Log from pilotlog.txt -
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | INFO     | extracted standard info from prmon json
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 12:24:50] 2025-05-24 19:24:36,040 | WARNING  | found no stored workdir sizes
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | will not add max space = 0 B to job metrics
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | WARNING  | wrong length of table data, x=[1748114519.0], y=[1032.0] (must be same and length>=4)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | ..............................
[2025-05-24 12:24:50] 2025-05-24 19:24:36,041 | INFO     | . Timing measurements:
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . get job = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . initial setup = 3 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . payload setup = 5 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . stage-in = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . payload execution = 21 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . stage-out = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | . log creation = 0 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | ..............................
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 12:24:50] 2025-05-24 19:24:36,042 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665632696/pilotlog.txt
[2025-05-24 12:24:50] [end log extracts]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,057 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,058 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 12:24:50] 2025-05-24 19:24:36,290 | INFO     | 
[2025-05-24 12:24:50] 2025-05-24 19:24:36,290 | INFO     | job summary report
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | --------------------------------------------------
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | PanDA job id: 6665632696
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | task id: 44871837
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 12:22:11,506 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | pilot state: failed 
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | transexitcode: 65
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | exeerrorcode: 65
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | exitcode: 65
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | cpuconsumptiontime: 16 s
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | nevents: 0
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | neventsw: 0
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | pid: 2455111
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | pgrp: 2455111
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | corecount: 12
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | event service: False
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | sizes: {0: 2393736, 3: 2393942, 11: 2393970, 27: 2417266, 28: 2417242, 30: 2421505, 33: 2421661, 166: 2421831}
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | --------------------------------------------------
[2025-05-24 12:24:50] 2025-05-24 19:24:36,291 | INFO     | 
[2025-05-24 12:24:50] 2025-05-24 19:24:36,292 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | job 6665632696 has completed (purged errors)
[2025-05-24 12:24:50] 2025-05-24 19:24:36,324 | INFO     | overall cleanup function is called
[2025-05-24 12:24:50] 2025-05-24 19:24:37,349 | INFO     | --- collectZombieJob: --- 10, [2455111]
[2025-05-24 12:24:50] 2025-05-24 19:24:37,349 | INFO     | zombie collector waiting for pid 2455111
[2025-05-24 12:24:50] 2025-05-24 19:24:37,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 12:24:50] 2025-05-24 19:24:37,350 | INFO     | collected zombie processes
[2025-05-24 12:24:50] 2025-05-24 19:24:37,350 | INFO     | will attempt to kill all subprocesses of pid=2455111
[2025-05-24 12:24:50] 2025-05-24 19:24:38,280 | INFO     | PID=2448804 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 12:24:50] 2025-05-24 19:24:38,280 | INFO     | .. there are 28 such processes running
[2025-05-24 12:24:50] 2025-05-24 19:24:38,524 | INFO     | process IDs to be killed: [2455111] (in reverse order)
[2025-05-24 12:24:50] 2025-05-24 19:24:38,593 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 12:24:50] 2025-05-24 19:24:38,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 12:24:50] 2025-05-24 19:24:38,621 | INFO     | did not find any defunct processes belonging to 2455111
[2025-05-24 12:24:50] 2025-05-24 19:24:38,628 | INFO     | did not find any defunct processes belonging to 2455111
[2025-05-24 12:24:50] 2025-05-24 19:24:38,628 | INFO     | ready for new job
[2025-05-24 12:24:50] 2025-05-24 19:24:38,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 12:24:50] 2025-05-24 19:24:38,630 | INFO     | **************************************
[2025-05-24 12:24:50] 2025-05-24 19:24:38,630 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 12:24:50] 2025-05-24 19:24:38,630 | INFO     | **************************************
[2025-05-24 12:24:50] 2025-05-24 19:24:38,630 | INFO     | 
[2025-05-24 12:24:50] 2025-05-24 19:24:38,632 | INFO     | architecture information:
[2025-05-24 12:24:50] 2025-05-24 19:24:38,632 | INFO     | executing command: cat /etc/os-release
[2025-05-24 12:24:50] 2025-05-24 19:24:38,651 | INFO     | cat /etc/os-release:
[2025-05-24 12:24:50] NAME="CentOS Linux"
[2025-05-24 12:24:50] VERSION="7 (Core)"
[2025-05-24 12:24:50] ID="centos"
[2025-05-24 12:24:50] ID_LIKE="rhel fedora"
[2025-05-24 12:24:50] VERSION_ID="7"
[2025-05-24 12:24:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 12:24:50] ANSI_COLOR="0;31"
[2025-05-24 12:24:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 12:24:50] HOME_URL="https://www.centos.org/"
[2025-05-24 12:24:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 12:24:50] 
[2025-05-24 12:24:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 12:24:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 12:24:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 12:24:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 12:24:50] 
[2025-05-24 12:24:50] 2025-05-24 19:24:38,652 | INFO     | **************************************
[2025-05-24 12:24:50] 2025-05-24 19:24:39,166 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 12:24:50] 2025-05-24 19:24:39,181 | INFO     | sufficient remaining disk space (2105900269568 B)
[2025-05-24 12:24:50] 2025-05-24 19:24:39,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 12:24:50] 2025-05-24 19:24:39,182 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 12:24:50] 2025-05-24 19:24:39,182 | INFO     | update_server=False
[2025-05-24 12:24:50] 2025-05-24 19:24:39,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 12:24:50] 2025-05-24 19:24:39,196 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 12:24:50] 2025-05-24 19:24:39,197 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 12:24:50] 2025-05-24 19:24:39,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 12:24:50] 2025-05-24 19:24:39,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 12:24:50] 2025-05-24 19:24:39,245 | INFO     | all payload control threads have been joined
[2025-05-24 12:24:50] 2025-05-24 19:24:39,330 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 12:24:50] 2025-05-24 19:24:39,330 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 12:24:50] 2025-05-24 19:24:39,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:24:50] 2025-05-24 19:24:39,331 | INFO     | will abort loop
[2025-05-24 12:24:50] 2025-05-24 19:24:39,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 12:24:50] 2025-05-24 19:24:39,972 | INFO     | all job control threads have been joined
[2025-05-24 12:24:50] 2025-05-24 19:24:40,188 | INFO     | [job] retrieve thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,251 | INFO     | [payload] control thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,256 | INFO     | all data control threads have been joined
[2025-05-24 12:24:50] 2025-05-24 19:24:40,336 | INFO     | [job] job monitor thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,416 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,425 | INFO     | [job] validate thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,619 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 12:24:50] 2025-05-24 19:24:40,814 | INFO     | [payload] validate_post thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,895 | INFO     | [data] copytool_in thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,952 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:40,978 | INFO     | [job] control thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:41,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:41,262 | INFO     | [data] control thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:41,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 12:24:50] 2025-05-24 19:24:41,760 | INFO     | [payload] failed_post thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:42,352 | INFO     | [job] queue monitor thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:42,629 | INFO     | [data] copytool_out thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:43,697 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 12:24:50] 2025-05-24 19:24:44,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731996702528)>', '<ExcThread(monitor, started 139731316762368)>']
[2025-05-24 12:24:50] 2025-05-24 19:24:45,232 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 12:24:50] 2025-05-24 19:24:45,232 | INFO     | [monitor] control thread has ended
[2025-05-24 12:24:50] 2025-05-24 19:24:49,767 | INFO     | all workflow threads have been joined
[2025-05-24 12:24:50] 2025-05-24 19:24:49,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 12:24:50] 2025-05-24 19:24:49,768 | INFO     | traces error code: 0
[2025-05-24 12:24:50] 2025-05-24 19:24:49,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 12:24:50] 2025-05-24 19:24:50,022 [wrapper] ==== pilot stdout END ====
[2025-05-24 12:24:50] 2025-05-24 19:24:50,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 12:24:50] 2025-05-24 19:24:50,026 [wrapper] pilotpid: 2448804
[2025-05-24 12:24:50] 2025-05-24 19:24:50,027 [wrapper] Pilot exit status: 0
[2025-05-24 12:24:50] 2025-05-24 19:24:50,040 [wrapper] pandaids: 6665632696
[2025-05-24 12:24:50] 2025-05-24 19:24:50,083 [wrapper] cleanup supervisor_pilot 2448810 2448805
[2025-05-24 12:24:50] 2025-05-24 19:24:50,085 [wrapper] Test setup, not cleaning
[2025-05-24 12:24:50] 2025-05-24 19:24:50,087 [wrapper] apfmon messages muted
[2025-05-24 12:24:50] 2025-05-24 19:24:50,089 [wrapper] ==== wrapper stdout END ====
[2025-05-24 12:24:50] 2025-05-24 19:24:50,111 [wrapper] ==== wrapper stderr END ====
[2025-05-24 12:24:50]  *** Error codes and diagnostics ***
[2025-05-24 12:24:50]     "exeErrorCode": 65,
[2025-05-24 12:24:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 12:24:50]     "pilotErrorCode": 1305,
[2025-05-24 12:24:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 12:24:50]  *** Listing of results directory ***
[2025-05-24 12:24:50] total 224480
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc    495897 May 24 09:36 pilot3.tar.gz
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc      5111 May 24 09:37 queuedata.json
[2025-05-24 12:24:50] -rwx------. 1 boinc boinc     37140 May 24 09:38 runpilot2-wrapper.sh
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc       100 May 24 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 12:24:50] -rwxr-xr-x. 1 boinc boinc      7986 May 24 12:21 run_atlas
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc       105 May 24 12:21 job.xml
[2025-05-24 12:24:50] -rw-r--r--. 2 boinc boinc 225851926 May 24 12:21 EVNT.44871834._000820.pool.root.1
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc      6601 May 24 12:21 init_data.xml
[2025-05-24 12:24:50] -rw-r--r--. 2 boinc boinc     15093 May 24 12:21 start_atlas.sh
[2025-05-24 12:24:50] drwxrwx--x. 2 boinc boinc      4096 May 24 12:21 shared
[2025-05-24 12:24:50] -rw-r--r--. 2 boinc boinc    508881 May 24 12:21 input.tar.gz
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc         0 May 24 12:21 boinc_lockfile
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc      2558 May 24 12:21 pandaJob.out
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc    988564 May 24 12:21 agis_schedconf.cvmfs.json
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc   1596740 May 24 12:21 agis_ddmendpoints.agis.ALL.json
[2025-05-24 12:24:50] drwx------. 4 boinc boinc      4096 May 24 12:21 pilot3
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc       522 May 24 12:22 boinc_task_state.xml
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc       964 May 24 12:22 memory_monitor_summary.json
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc     20464 May 24 12:22 log.44871837._020566.job.log.tgz.1
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc        95 May 24 12:24 pilot_heartbeat.json
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc      8303 May 24 12:24 heartbeat.json
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc        22 May 24 12:24 wrapper_checkpoint.txt
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc      8192 May 24 12:24 boinc_mmap_file
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc      4661 May 24 12:24 pilotlog.txt
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc     75600 May 24 12:24 log.44871837._020566.job.log.1
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc       188 May 24 12:24 output.list
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc       620 May 24 12:24 runtime_log
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc    112640 May 24 12:24 result.tar.gz
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc      8484 May 24 12:24 runtime_log.err
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc       647 May 24 12:24 iXVMDmr46c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP0RKDmC7TGxn.diag
[2025-05-24 12:24:50] -rw-r--r--. 1 boinc boinc     21636 May 24 12:24 stderr.txt
[2025-05-24 12:24:50] No HITS result produced
[2025-05-24 12:24:50]  *** Contents of shared directory: ***
[2025-05-24 12:24:50] total 221188
[2025-05-24 12:24:50] -rw-r--r--. 2 boinc boinc 225851926 May 24 12:21 ATLAS.root_0
[2025-05-24 12:24:50] -rw-r--r--. 2 boinc boinc     15093 May 24 12:21 start_atlas.sh
[2025-05-24 12:24:50] -rw-r--r--. 2 boinc boinc    508881 May 24 12:21 input.tar.gz
[2025-05-24 12:24:50] -rw-------. 1 boinc boinc    112640 May 24 12:24 result.tar.gz
12:24:51 (2445244): run_atlas exited; CPU time 20.668372
12:24:51 (2445244): called boinc_finish(0)

</stderr_txt>
]]>

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