Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 17:48:45 (2707905): Detected: vboxwrapper 26206
2025-05-24 17:48:45 (2707905): Detected: BOINC client v7.24.1
2025-05-24 17:48:45 (2707905): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-05-24 17:48:45 (2707905): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 17:48:45 (2707905): Create VM. (boinc_25b3a201d17a3aa4, slot#7)
2025-05-24 17:48:45 (2707905): Setting Memory Size for VM. (4800MB)
2025-05-24 17:48:45 (2707905): Setting CPU Count for VM. (8)
2025-05-24 17:48:45 (2707905): Setting Chipset Options for VM.
2025-05-24 17:48:46 (2707905): Setting Graphics Controller Options for VM.
2025-05-24 17:48:46 (2707905): Setting Boot Options for VM.
2025-05-24 17:48:46 (2707905): Setting Network Configuration for NAT.
2025-05-24 17:48:46 (2707905): Enabling VM Network Access.
2025-05-24 17:48:46 (2707905): Disabling USB Support for VM.
2025-05-24 17:48:46 (2707905): Disabling COM Port Support for VM.
2025-05-24 17:48:46 (2707905): Disabling LPT Port Support for VM.
2025-05-24 17:48:46 (2707905): Disabling Audio Support for VM.
2025-05-24 17:48:46 (2707905): Disabling Clipboard Support for VM.
2025-05-24 17:48:46 (2707905): Disabling Drag and Drop Support for VM.
2025-05-24 17:48:46 (2707905): Adding storage controller(s) to VM.
2025-05-24 17:48:46 (2707905): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 17:48:46 (2707905): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 17:48:46 (2707905): forwarding host port 59319 to guest port 80
2025-05-24 17:48:46 (2707905): Enabling remote desktop for VM.
2025-05-24 17:48:47 (2707905): Required extension pack not installed, remote desktop not enabled.
2025-05-24 17:48:47 (2707905): Enabling shared directory for VM.
2025-05-24 17:48:47 (2707905): Starting VM using VBoxManage interface. (boinc_25b3a201d17a3aa4, slot#7)
2025-05-24 17:48:48 (2707905): Successfully started VM. (PID = '2708293')
2025-05-24 17:48:48 (2707905): Reporting VM Process ID to BOINC.
2025-05-24 17:48:48 (2707905): Guest Log: BIOS: VirtualBox 7.0.16
2025-05-24 17:48:48 (2707905): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 17:48:48 (2707905): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 17:48:48 (2707905): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 17:48:48 (2707905): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 17:48:48 (2707905): Detected: Web Application Enabled (http://localhost:59319)
2025-05-24 17:48:48 (2707905): Preference change detected
2025-05-24 17:48:48 (2707905): Setting CPU throttle for VM. (75%)
2025-05-24 17:48:48 (2707905): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 17:48:50 (2707905): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 17:48:50 (2707905): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 17:48:53 (2707905): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 17:48:53 (2707905): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 17:48:53 (2707905): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 17:48:59 (2707905): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 17:48:59 (2707905): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 17:49:05 (2707905): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000121 main     Log opened 2025-05-24T20:49:03.368796000Z
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000200 main     OS Product: Linux
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000225 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000260 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000261 main     Process ID: 1376
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.000261 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 17:49:05 (2707905): Guest Log: 00:00:00.001203 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 17:49:05 (2707905): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 17:49:05 (2707905): Guest Log: [INFO] Mounting shared directory
2025-05-24 17:49:05 (2707905): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 17:51:08 (2707905): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 17:51:08 (2707905): Guest Log: [INFO] Detected branch: prod
2025-05-24 17:51:09 (2707905): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 17:51:09 (2707905): Guest Log: Copying input files
2025-05-24 17:51:10 (2707905): Guest Log: Copied input files into RunAtlas.
2025-05-24 17:51:10 (2707905): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-24 17:51:10 (2707905): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-24 17:51:10 (2707905): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-24 17:51:10 (2707905): Guest Log: Further information can be found at the LHC@home message board.
2025-05-24 17:51:21 (2707905): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 17:51:22 (2707905): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 17:51:22 (2707905): Guest Log: 2.6.3.0 1694 0 30124 146378 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-24 17:51:22 (2707905): Guest Log: copied the webapp to /var/www
2025-05-24 17:51:22 (2707905): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-24 17:51:22 (2707905): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-24 17:51:23 (2707905): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 17:51:23 (2707905): Guest Log:  *** Starting ATLAS job. (PandaID=6665441821 taskID=44871837) ***
2025-05-24 17:55:59 (2707905): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 17:56:19 (2707905): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 18:41:36 (2707905): VM state change detected. (old = 'running', new = 'paused')
2025-05-24 18:41:55 (2707905): VM state change detected. (old = 'paused', new = 'running')
2025-05-24 19:28:32 (2707905): Status Report: Elapsed Time: '6000.000000'
2025-05-24 19:28:32 (2707905): Status Report: CPU Time: '29435.420000'
2025-05-24 19:54:22 (2707905): Guest Log:  *** Job finished ***
2025-05-24 19:54:22 (2707905): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:29,969 | INFO     | [data] queue_monitor thread has finished
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:32,846 | INFO     | job.realtimelogging is not enabled
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:33,849 | INFO     | [payload] run_realtimelog thread has finished
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:36,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258610276160)>', '<ExcThread(monitor, started 140257727084288)>']
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:37,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:37,005 | INFO     | [monitor] control thread has ended
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,065 | INFO     | all workflow threads have been joined
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,065 | INFO     | end of generic workflow (traces error code: 0)
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,065 | INFO     | traces error code: 0
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,129 [wrapper] ==== pilot stdout END ====
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,136 [wrapper] ==== wrapper stdout RESUME ====
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,141 [wrapper] pilotpid: 6041
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,146 [wrapper] Pilot exit status: 0
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,267 [wrapper] pandaids: 6665441821
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,296 [wrapper] cleanup supervisor_pilot  5247 6042
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,300 [wrapper] Test setup, not cleaning
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,305 [wrapper] apfmon messages muted
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,309 [wrapper] ==== wrapper stdout END ====
2025-05-24 19:54:22 (2707905): Guest Log: 2025-05-24 22:53:41,314 [wrapper] ==== wrapper stderr END ====
2025-05-24 19:54:22 (2707905): Guest Log:  *** Error codes and diagnostics ***
2025-05-24 19:54:22 (2707905): Guest Log:     "exeErrorCode": 0,
2025-05-24 19:54:22 (2707905): Guest Log:     "exeErrorDiag": "",
2025-05-24 19:54:22 (2707905): Guest Log:     "pilotErrorCode": 0,
2025-05-24 19:54:22 (2707905): Guest Log:     "pilotErrorDiag": "",
2025-05-24 19:54:22 (2707905): Guest Log:  *** Listing of results directory ***
2025-05-24 19:54:22 (2707905): Guest Log: total 199672
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 13:27 pilot3.tar.gz
2025-05-24 19:54:22 (2707905): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 13:34 runpilot2-wrapper.sh
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 13:34 queuedata.json
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas      6515 May 24 20:51 init_data.xml
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas     15093 May 24 20:51 start_atlas.sh
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas    508871 May 24 20:51 input.tar.gz
2025-05-24 19:54:22 (2707905): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 20:51 EVNT.44871834._000724.pool.root.1 -> /data/./ATLAS.root_0
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May 24 20:51 pandaJob.out
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas    990811 May 24 20:53 agis_schedconf.cvmfs.json
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas   1596740 May 24 20:53 agis_ddmendpoints.agis.ALL.json
2025-05-24 19:54:22 (2707905): Guest Log: drwx------. 4 atlas atlas      4096 May 24 20:53 pilot3
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas 198904272 May 24 22:52 HITS.44871837._018109.pool.root.1
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas      1032 May 24 22:53 memory_monitor_summary.json
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas    327183 May 24 22:53 log.44871837._018109.job.log.tgz.1
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas        95 May 24 22:53 pilot_heartbeat.json
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas      7736 May 24 22:53 heartbeat.json
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas      4608 May 24 22:53 pilotlog.txt
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas    575702 May 24 22:53 log.44871837._018109.job.log.1
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas       357 May 24 22:53 output.list
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 24 22:53 runtime_log
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas    921600 May 24 22:53 result.tar.gz
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 atlas atlas      8628 May 24 22:53 runtime_log.err
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas       665 May 24 22:53 JLNODmBC4c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPZRKDmBBYZsn.diag
2025-05-24 19:54:22 (2707905): Guest Log: Looking for outputfile HITS.44871837._018109.pool.root.1
2025-05-24 19:54:22 (2707905): Guest Log: HITS file was successfully produced
2025-05-24 19:54:22 (2707905): Guest Log: -rw-------. 1 atlas atlas 198904272 May 24 22:52 /home/atlas/RunAtlas/HITS.44871837._018109.pool.root.1
2025-05-24 19:54:22 (2707905): Guest Log: Successfully finished the ATLAS job!
2025-05-24 19:54:22 (2707905): Guest Log: Copying the results back to the shared directory!
2025-05-24 19:54:22 (2707905): Guest Log:  *** Contents of shared directory: ***
2025-05-24 19:54:22 (2707905): Guest Log: total 223680
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 root root 227585837 May 24 20:48 ATLAS.root_0
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 root root      6515 May 24 20:48 init_data.xml
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 root root    508871 May 24 20:48 input.tar.gz
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 root root    921600 May 24  2025 result.tar.gz
2025-05-24 19:54:22 (2707905): Guest Log: -rw-r--r--. 1 root root     15093 May 24 20:48 start_atlas.sh
2025-05-24 19:54:22 (2707905): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-24 19:54:22 (2707905): VM Completion File Detected.
2025-05-24 19:54:22 (2707905): Powering off VM.
2025-05-24 19:54:22 (2707905): Successfully stopped VM.
2025-05-24 19:54:22 (2707905): Deregistering VM. (boinc_25b3a201d17a3aa4, slot#7)
2025-05-24 19:54:22 (2707905): Removing network bandwidth throttle group from VM.
2025-05-24 19:54:22 (2707905): Removing VM from VirtualBox.
19:54:27 (2707905): called boinc_finish(0)

</stderr_txt>
]]>

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