Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:35:18 (1410597): wrapper (7.7.26015): starting
11:35:18 (1410597): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 11:35:18] Arguments: --nthreads 8
[2025-05-24 11:35:18] Threads: 8
[2025-05-24 11:35:18] Checking for CVMFS
[2025-05-24 11:35:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 11:35:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 11:35:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 11:35:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 11:35:19] 2.11.3.0 1807141 17834 250332 146376 2 522 33949961 45568000 6846 130560 0 132648927 99.788 93729948 20635 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 11:35:19] CVMFS is ok
[2025-05-24 11:35:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 11:35:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 11:35:19] Further information can be found at the LHC@home message board.
[2025-05-24 11:35:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 11:35:19] Checking for apptainer binary...
[2025-05-24 11:35:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 11:35:19] Running /usr/bin/apptainer --version
[2025-05-24 11:35:19] apptainer version 1.3.3-1.el9
[2025-05-24 11:35:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 11:35:19] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0010.triumf.lcg
[2025-05-24 11:35:19] apptainer works
[2025-05-24 11:35:19] Set ATHENA_PROC_NUMBER=8
[2025-05-24 11:35:19] Set ATHENA_CORE_NUMBER=8
[2025-05-24 11:35:19] Starting ATLAS job with PandaID=6665632072
[2025-05-24 11:35:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 11:39:40]  *** The last 200 lines of the pilot log: ***
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | WARNING  | wrong length of table data, x=[1748111808.0], y=[1521.0] (must be same and length>=4)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | INFO     | ..............................
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . Timing measurements:
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . get job = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . initial setup = 4 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . payload setup = 16 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . stage-in = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . payload execution = 28 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . stage-out = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . log creation = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | ..............................
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665632072/pilotlog.txt
[2025-05-24 11:39:40] 2025-05-24 18:39:22,367 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 11:39:40] - Log from pilotlog.txt -
[2025-05-24 11:39:40] 2025-05-24 18:39:22,237 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 11:39:40] 2025-05-24 18:39:22,237 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665632072/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | INFO     | extracted standard info from prmon json
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | WARNING  | wrong length of table data, x=[1748111808.0], y=[1521.0] (must be same and length>=4)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | INFO     | ..............................
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . Timing measurements:
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . get job = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . initial setup = 4 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . payload setup = 16 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . stage-in = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . payload execution = 28 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . stage-out = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . log creation = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | ..............................
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665632072/pilotlog.txt
[2025-05-24 11:39:40] 2025-05-24 18:39:22,368 | WARNING  | 
[2025-05-24 11:39:40] [begin log extracts]
[2025-05-24 11:39:40] - Log from pilotlog.txt -
[2025-05-24 11:39:40] 2025-05-24 18:39:22,237 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-24 11:39:40] 2025-05-24 18:39:22,237 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665632072/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | INFO     | extracted standard info from prmon json
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 11:39:40] 2025-05-24 18:39:22,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | WARNING  | wrong length of table data, x=[1748111808.0], y=[1521.0] (must be same and length>=4)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,239 | INFO     | ..............................
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . Timing measurements:
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . get job = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . initial setup = 4 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . payload setup = 16 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . stage-in = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . payload execution = 28 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . stage-out = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | . log creation = 0 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | ..............................
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 11:39:40] 2025-05-24 18:39:22,240 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665632072/pilotlog.txt
[2025-05-24 11:39:40] [end log extracts]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,368 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,369 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 11:39:40] 2025-05-24 18:39:22,723 | INFO     | 
[2025-05-24 11:39:40] 2025-05-24 18:39:22,723 | INFO     | job summary report
[2025-05-24 11:39:40] 2025-05-24 18:39:22,723 | INFO     | --------------------------------------------------
[2025-05-24 11:39:40] 2025-05-24 18:39:22,723 | INFO     | PanDA job id: 6665632072
[2025-05-24 11:39:40] 2025-05-24 18:39:22,723 | INFO     | task id: 44871837
[2025-05-24 11:39:40] 2025-05-24 18:39:22,723 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 11:37:04,170 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | pilot state: failed 
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | transexitcode: 65
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | exeerrorcode: 65
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | exitcode: 65
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | cpuconsumptiontime: 16 s
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | nevents: 0
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | neventsw: 0
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | pid: 1429377
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | pgrp: 1429377
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | corecount: 8
[2025-05-24 11:39:40] 2025-05-24 18:39:22,724 | INFO     | event service: False
[2025-05-24 11:39:40] 2025-05-24 18:39:22,725 | INFO     | sizes: {0: 2393735, 1: 2393735, 12: 2393763, 13: 2393997, 23: 2394053, 48: 2417369, 49: 2417473, 50: 2421736, 51: 2421764, 178: 2421906}
[2025-05-24 11:39:40] 2025-05-24 18:39:22,725 | INFO     | --------------------------------------------------
[2025-05-24 11:39:40] 2025-05-24 18:39:22,725 | INFO     | 
[2025-05-24 11:39:40] 2025-05-24 18:39:22,725 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 11:39:40] 2025-05-24 18:39:22,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | job 6665632072 has completed (purged errors)
[2025-05-24 11:39:40] 2025-05-24 18:39:22,768 | INFO     | overall cleanup function is called
[2025-05-24 11:39:40] 2025-05-24 18:39:23,776 | INFO     | --- collectZombieJob: --- 10, [1429377]
[2025-05-24 11:39:40] 2025-05-24 18:39:23,776 | INFO     | zombie collector waiting for pid 1429377
[2025-05-24 11:39:40] 2025-05-24 18:39:23,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 11:39:40] 2025-05-24 18:39:23,776 | INFO     | collected zombie processes
[2025-05-24 11:39:40] 2025-05-24 18:39:23,776 | INFO     | will attempt to kill all subprocesses of pid=1429377
[2025-05-24 11:39:40] 2025-05-24 18:39:25,056 | INFO     | process IDs to be killed: [1429377] (in reverse order)
[2025-05-24 11:39:40] 2025-05-24 18:39:25,295 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 11:39:40] 2025-05-24 18:39:25,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 11:39:40] 2025-05-24 18:39:25,356 | INFO     | did not find any defunct processes belonging to 1429377
[2025-05-24 11:39:40] 2025-05-24 18:39:25,413 | INFO     | did not find any defunct processes belonging to 1429377
[2025-05-24 11:39:40] 2025-05-24 18:39:25,431 | INFO     | ready for new job
[2025-05-24 11:39:40] 2025-05-24 18:39:25,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 11:39:40] 2025-05-24 18:39:25,432 | INFO     | **************************************
[2025-05-24 11:39:40] 2025-05-24 18:39:25,433 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 11:39:40] 2025-05-24 18:39:25,433 | INFO     | **************************************
[2025-05-24 11:39:40] 2025-05-24 18:39:25,433 | INFO     | 
[2025-05-24 11:39:40] 2025-05-24 18:39:25,456 | INFO     | architecture information:
[2025-05-24 11:39:40] 2025-05-24 18:39:25,483 | INFO     | executing command: cat /etc/os-release
[2025-05-24 11:39:40] 2025-05-24 18:39:25,517 | INFO     | cat /etc/os-release:
[2025-05-24 11:39:40] NAME="CentOS Linux"
[2025-05-24 11:39:40] VERSION="7 (Core)"
[2025-05-24 11:39:40] ID="centos"
[2025-05-24 11:39:40] ID_LIKE="rhel fedora"
[2025-05-24 11:39:40] VERSION_ID="7"
[2025-05-24 11:39:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 11:39:40] ANSI_COLOR="0;31"
[2025-05-24 11:39:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 11:39:40] HOME_URL="https://www.centos.org/"
[2025-05-24 11:39:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 11:39:40] 
[2025-05-24 11:39:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 11:39:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 11:39:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 11:39:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 11:39:40] 
[2025-05-24 11:39:40] 2025-05-24 18:39:25,518 | INFO     | **************************************
[2025-05-24 11:39:40] 2025-05-24 18:39:26,021 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 11:39:40] 2025-05-24 18:39:26,062 | INFO     | sufficient remaining disk space (1422748811264 B)
[2025-05-24 11:39:40] 2025-05-24 18:39:26,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | INFO     | update_server=False
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 11:39:40] 2025-05-24 18:39:26,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 11:39:40] 2025-05-24 18:39:26,223 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 11:39:40] 2025-05-24 18:39:26,223 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 11:39:40] 2025-05-24 18:39:26,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 11:39:40] 2025-05-24 18:39:26,223 | INFO     | will abort loop
[2025-05-24 11:39:40] 2025-05-24 18:39:26,307 | INFO     | all data control threads have been joined
[2025-05-24 11:39:40] 2025-05-24 18:39:27,069 | INFO     | [job] retrieve thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,069 | INFO     | all payload control threads have been joined
[2025-05-24 11:39:40] 2025-05-24 18:39:27,105 | INFO     | [payload] validate_post thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,229 | INFO     | [job] job monitor thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,272 | INFO     | all job control threads have been joined
[2025-05-24 11:39:40] 2025-05-24 18:39:27,317 | INFO     | [data] control thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,345 | INFO     | [job] validate thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,420 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,563 | INFO     | [data] copytool_in thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 11:39:40] 2025-05-24 18:39:27,704 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,710 | INFO     | [payload] failed_post thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:27,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 11:39:40] 2025-05-24 18:39:28,074 | INFO     | [data] copytool_out thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:28,074 | INFO     | [payload] control thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:28,248 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:28,278 | INFO     | [job] control thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:28,729 | INFO     | [job] queue monitor thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:31,718 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 11:39:40] 2025-05-24 18:39:33,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559617972032)>', '<ExcThread(monitor, started 140559205246720)>']
[2025-05-24 11:39:40] 2025-05-24 18:39:34,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 11:39:40] 2025-05-24 18:39:34,113 | INFO     | [monitor] control thread has ended
[2025-05-24 11:39:40] 2025-05-24 18:39:38,308 | INFO     | all workflow threads have been joined
[2025-05-24 11:39:40] 2025-05-24 18:39:38,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 11:39:40] 2025-05-24 18:39:38,308 | INFO     | traces error code: 0
[2025-05-24 11:39:40] 2025-05-24 18:39:38,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 11:39:40] 2025-05-24 18:39:38,851 [wrapper] ==== pilot stdout END ====
[2025-05-24 11:39:40] 2025-05-24 18:39:38,901 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 11:39:40] 2025-05-24 18:39:38,952 [wrapper] pilotpid: 1419046
[2025-05-24 11:39:40] 2025-05-24 18:39:38,990 [wrapper] Pilot exit status: 0
[2025-05-24 11:39:40] 2025-05-24 18:39:39,123 [wrapper] pandaids: 6665632072
[2025-05-24 11:39:40] 2025-05-24 18:39:39,310 [wrapper] cleanup supervisor_pilot 1419055 1419047
[2025-05-24 11:39:40] 2025-05-24 18:39:39,364 [wrapper] Test setup, not cleaning
[2025-05-24 11:39:40] 2025-05-24 18:39:39,400 [wrapper] apfmon messages muted
[2025-05-24 11:39:40] 2025-05-24 18:39:39,437 [wrapper] ==== wrapper stdout END ====
[2025-05-24 11:39:40] 2025-05-24 18:39:39,472 [wrapper] ==== wrapper stderr END ====
[2025-05-24 11:39:40]  *** Error codes and diagnostics ***
[2025-05-24 11:39:40]     "exeErrorCode": 65,
[2025-05-24 11:39:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 11:39:40]     "pilotErrorCode": 1305,
[2025-05-24 11:39:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 11:39:40]  *** Listing of results directory ***
[2025-05-24 11:39:40] total 222376
[2025-05-24 11:39:40] -rwx------. 1 boinc boinc     37140 May 24 09:09 runpilot2-wrapper.sh
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc      5111 May 24 09:09 queuedata.json
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc    495897 May 24 09:09 pilot3.tar.gz
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc       100 May 24 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 11:39:40] -rwxr-xr-x. 1 boinc boinc      7986 May 24 11:35 run_atlas
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc       105 May 24 11:35 job.xml
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc      6453 May 24 11:35 init_data.xml
[2025-05-24 11:39:40] -rw-r--r--. 2 boinc boinc 223696691 May 24 11:35 EVNT.44871834._000798.pool.root.1
[2025-05-24 11:39:40] -rw-r--r--. 2 boinc boinc     15093 May 24 11:35 start_atlas.sh
[2025-05-24 11:39:40] drwxrwx--x. 2 boinc boinc      4096 May 24 11:35 shared
[2025-05-24 11:39:40] -rw-r--r--. 2 boinc boinc    508866 May 24 11:35 input.tar.gz
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc         0 May 24 11:35 boinc_lockfile
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc      2557 May 24 11:35 pandaJob.out
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc    988572 May 24 11:35 agis_schedconf.cvmfs.json
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc   1596740 May 24 11:35 agis_ddmendpoints.agis.ALL.json
[2025-05-24 11:39:40] drwx------. 4 boinc boinc      4096 May 24 11:35 pilot3
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc       523 May 24 11:37 boinc_task_state.xml
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc       986 May 24 11:37 memory_monitor_summary.json
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc     20280 May 24 11:37 log.44871837._020000.job.log.tgz.1
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc        95 May 24 11:38 pilot_heartbeat.json
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc      8360 May 24 11:39 heartbeat.json
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc      4661 May 24 11:39 pilotlog.txt
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc      8192 May 24 11:39 boinc_mmap_file
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc        22 May 24 11:39 wrapper_checkpoint.txt
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc     77173 May 24 11:39 log.44871837._020000.job.log.1
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc       188 May 24 11:39 output.list
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc       620 May 24 11:39 runtime_log
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc    112640 May 24 11:39 result.tar.gz
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc      8647 May 24 11:39 runtime_log.err
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc       645 May 24 11:39 NtjLDmxb6c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhzMKDmlQFbAn.diag
[2025-05-24 11:39:40] -rw-r--r--. 1 boinc boinc     17631 May 24 11:39 stderr.txt
[2025-05-24 11:39:40] No HITS result produced
[2025-05-24 11:39:40]  *** Contents of shared directory: ***
[2025-05-24 11:39:40] total 219088
[2025-05-24 11:39:40] -rw-r--r--. 2 boinc boinc 223696691 May 24 11:35 ATLAS.root_0
[2025-05-24 11:39:40] -rw-r--r--. 2 boinc boinc     15093 May 24 11:35 start_atlas.sh
[2025-05-24 11:39:40] -rw-r--r--. 2 boinc boinc    508866 May 24 11:35 input.tar.gz
[2025-05-24 11:39:40] -rw-------. 1 boinc boinc    112640 May 24 11:39 result.tar.gz
11:39:42 (1410597): run_atlas exited; CPU time 24.026534
11:39:42 (1410597): called boinc_finish(0)

</stderr_txt>
]]>

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