Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-26 11:24:16 (17960): Detected: vboxwrapper 26206
2025-05-26 11:24:16 (17960): Detected: BOINC client v8.0.2
2025-05-26 11:24:17 (17960): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-26 11:24:18 (17960): Successfully copied 'init_data.xml' to the shared directory.
2025-05-26 11:24:18 (17960): Create VM. (boinc_9d028094c30320f0, slot#2)
2025-05-26 11:24:19 (17960): Setting Memory Size for VM. (4800MB)
2025-05-26 11:24:19 (17960): Setting CPU Count for VM. (8)
2025-05-26 11:24:19 (17960): Setting Chipset Options for VM.
2025-05-26 11:24:20 (17960): Setting Graphics Controller Options for VM.
2025-05-26 11:24:20 (17960): Setting Boot Options for VM.
2025-05-26 11:24:20 (17960): Setting Network Configuration for NAT.
2025-05-26 11:24:20 (17960): Enabling VM Network Access.
2025-05-26 11:24:21 (17960): Disabling USB Support for VM.
2025-05-26 11:24:21 (17960): Disabling COM Port Support for VM.
2025-05-26 11:24:21 (17960): Disabling LPT Port Support for VM.
2025-05-26 11:24:22 (17960): Disabling Audio Support for VM.
2025-05-26 11:24:22 (17960): Disabling Clipboard Support for VM.
2025-05-26 11:24:22 (17960): Disabling Drag and Drop Support for VM.
2025-05-26 11:24:22 (17960): Adding storage controller(s) to VM.
2025-05-26 11:24:23 (17960): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-26 11:24:26 (17960): Adding VirtualBox Guest Additions to VM.
2025-05-26 11:24:26 (17960): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-26 11:24:26 (17960): forwarding host port 61632 to guest port 80
2025-05-26 11:24:26 (17960): Enabling remote desktop for VM.
2025-05-26 11:24:27 (17960): Required extension pack not installed, remote desktop not enabled.
2025-05-26 11:24:27 (17960): Enabling shared directory for VM.
2025-05-26 11:24:27 (17960): Starting VM using VBoxManage interface. (boinc_9d028094c30320f0, slot#2)
2025-05-26 11:24:32 (17960): Successfully started VM. (PID = '4440')
2025-05-26 11:24:32 (17960): Reporting VM Process ID to BOINC.
2025-05-26 11:24:32 (17960): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-26 11:24:32 (17960): Guest Log: CPUID EDX: 0x178bfbff
2025-05-26 11:24:32 (17960): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-26 11:24:32 (17960): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-26 11:24:32 (17960): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-26 11:24:32 (17960): Detected: Web Application Enabled (http://localhost:61632)
2025-05-26 11:24:32 (17960): Preference change detected
2025-05-26 11:24:32 (17960): Setting CPU throttle for VM. (50%)
2025-05-26 11:24:32 (17960): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-26 11:24:34 (17960): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-26 11:24:34 (17960): Guest Log: BIOS: Booting from Hard Disk...
2025-05-26 11:24:38 (17960): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-26 11:24:38 (17960): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-26 11:24:38 (17960): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-26 11:24:43 (17960): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-26 11:24:43 (17960): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-26 11:24:52 (17960): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000148 main     Log opened 2025-05-26T11:24:50.395538000Z
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000314 main     OS Product: Linux
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000370 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000420 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000461 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000462 main     Process ID: 1367
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000462 main     Package type: LINUX_64BITS_GENERIC
2025-05-26 11:24:52 (17960): Guest Log: 00:00:00.000972 main     5.2.32 r132073 started. Verbose level = 0
2025-05-26 11:24:52 (17960): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-26 11:24:52 (17960): Guest Log: [INFO] Mounting shared directory
2025-05-26 11:24:52 (17960): Guest Log: [INFO] Checking for init_data.xml
2025-05-26 11:24:55 (17960): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-26 11:24:55 (17960): Guest Log: [INFO] Detected branch: prod
2025-05-26 11:24:55 (17960): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-26 11:24:55 (17960): Guest Log: Copying input files
2025-05-26 11:24:57 (17960): Guest Log: Copied input files into RunAtlas.
2025-05-26 11:24:57 (17960): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-26 11:24:57 (17960): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-26 11:24:57 (17960): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-26 11:24:57 (17960): Guest Log: Further information can be found at the LHC@home message board.
2025-05-26 11:25:02 (17960): Guest Log: 00:00:10.005950 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 317 577 000ns (GuestNow=1 748 251 502 079 865 000 ns GuestLast=1 748 258 690 397 442 000 ns fSetTimeLastLoop=true )
2025-05-26 11:25:07 (17960): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-26 11:25:08 (17960): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-26 11:25:08 (17960): Guest Log: 2.6.3.0 1643 0 32212 146432 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-26 11:25:08 (17960): Guest Log: copied the webapp to /var/www
2025-05-26 11:25:08 (17960): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-26 11:25:08 (17960): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-26 11:25:09 (17960): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-26 11:25:09 (17960): Guest Log:  *** Starting ATLAS job. (PandaID=6665380149 taskID=44871837) ***
2025-05-26 13:04:35 (17960): Status Report: Elapsed Time: '6000.000000'
2025-05-26 13:04:35 (17960): Status Report: CPU Time: '25343.281250'
2025-05-26 13:22:43 (17960): VM state change detected. (old = 'running', new = 'paused')
2025-05-26 13:23:03 (17960): VM state change detected. (old = 'paused', new = 'running')
2025-05-26 13:25:05 (17960): VM state change detected. (old = 'running', new = 'paused')
2025-05-26 13:25:24 (17960): VM state change detected. (old = 'paused', new = 'running')
2025-05-26 13:25:35 (17960): VM state change detected. (old = 'running', new = 'paused')
2025-05-26 13:25:54 (17960): VM state change detected. (old = 'paused', new = 'running')
2025-05-26 13:27:55 (17960): VM state change detected. (old = 'running', new = 'paused')
2025-05-26 13:28:15 (17960): VM state change detected. (old = 'paused', new = 'running')
2025-05-26 13:28:25 (17960): VM state change detected. (old = 'running', new = 'paused')
2025-05-26 13:28:46 (17960): VM state change detected. (old = 'paused', new = 'running')
2025-05-26 13:35:25 (17960): VM state change detected. (old = 'running', new = 'paused')
2025-05-26 13:35:45 (17960): VM state change detected. (old = 'paused', new = 'running')
2025-05-26 14:46:43 (17960): Status Report: Elapsed Time: '12000.000000'
2025-05-26 14:46:43 (17960): Status Report: CPU Time: '54105.984375'
2025-05-26 15:53:01 (17960): Guest Log:  *** Job finished ***
2025-05-26 15:53:01 (17960): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:50:54,874 | INFO     | [data] queue_monitor thread has finished
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:50:58,142 | INFO     | job.realtimelogging is not enabled
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:50:59,177 | INFO     | [payload] run_realtimelog thread has finished
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:01,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641931659072)>', '<ExcThread(monitor, started 139641063732992)>']
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:01,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:01,204 | INFO     | [monitor] control thread has ended
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,199 | INFO     | all workflow threads have been joined
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,199 | INFO     | end of generic workflow (traces error code: 0)
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,199 | INFO     | traces error code: 0
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,345 [wrapper] ==== pilot stdout END ====
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,349 [wrapper] ==== wrapper stdout RESUME ====
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,353 [wrapper] pilotpid: 6019
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,357 [wrapper] Pilot exit status: 0
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,522 [wrapper] pandaids: 6665380149
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,557 [wrapper] cleanup supervisor_pilot 13438 6020
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,561 [wrapper] Test setup, not cleaning
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,566 [wrapper] apfmon messages muted
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,571 [wrapper] ==== wrapper stdout END ====
2025-05-26 15:53:01 (17960): Guest Log: 2025-05-26 13:51:06,575 [wrapper] ==== wrapper stderr END ====
2025-05-26 15:53:01 (17960): Guest Log:  *** Error codes and diagnostics ***
2025-05-26 15:53:01 (17960): Guest Log:     "exeErrorCode": 0,
2025-05-26 15:53:01 (17960): Guest Log:     "exeErrorDiag": "",
2025-05-26 15:53:01 (17960): Guest Log:     "pilotErrorCode": 0,
2025-05-26 15:53:01 (17960): Guest Log:     "pilotErrorDiag": "",
2025-05-26 15:53:01 (17960): Guest Log:  *** Listing of results directory ***
2025-05-26 15:53:01 (17960): Guest Log: total 200692
2025-05-26 15:53:01 (17960): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 10:13 pilot3.tar.gz
2025-05-26 15:53:01 (17960): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 10:33 queuedata.json
2025-05-26 15:53:01 (17960): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 10:35 runpilot2-wrapper.sh
2025-05-26 15:53:01 (17960): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 26 09:24 start_atlas.sh
2025-05-26 15:53:01 (17960): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 May 26 09:24 input.tar.gz
2025-05-26 15:53:01 (17960): Guest Log: -rwxr-xr-x. 1 atlas atlas     10589 May 26 09:24 init_data.xml
2025-05-26 15:53:01 (17960): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 26 09:24 EVNT.44871834._000630.pool.root.1 -> /data/./ATLAS.root_0
2025-05-26 15:53:01 (17960): Guest Log: -rw-r--r--. 1 atlas atlas      2557 May 26 09:25 pandaJob.out
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas    989949 May 26 09:27 agis_schedconf.cvmfs.json
2025-05-26 15:53:01 (17960): Guest Log: drwx------. 4 atlas atlas      4096 May 26 09:27 pilot3
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas 198692402 May 26 13:49 HITS.44871837._015753.pool.root.1
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas        95 May 26 13:49 pilot_heartbeat.json
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas      1032 May 26 13:50 memory_monitor_summary.json
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas   1603667 May 26 13:50 agis_ddmendpoints.agis.ALL.json
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas    396971 May 26 13:50 log.44871837._015753.job.log.tgz.1
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas      7736 May 26 13:50 heartbeat.json
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas      4485 May 26 13:51 pilotlog.txt
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas   1125805 May 26 13:51 log.44871837._015753.job.log.1
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas       357 May 26 13:51 output.list
2025-05-26 15:53:01 (17960): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 26 13:51 runtime_log
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas   1546240 May 26 13:51 result.tar.gz
2025-05-26 15:53:01 (17960): Guest Log: -rw-r--r--. 1 atlas atlas      8575 May 26 13:51 runtime_log.err
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas       653 May 26 13:51 EGRODmgO1c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpBRKDmfpq9No.diag
2025-05-26 15:53:01 (17960): Guest Log: Looking for outputfile HITS.44871837._015753.pool.root.1
2025-05-26 15:53:01 (17960): Guest Log: HITS file was successfully produced
2025-05-26 15:53:01 (17960): Guest Log: -rw-------. 1 atlas atlas 198692402 May 26 13:49 /home/atlas/RunAtlas/HITS.44871837._015753.pool.root.1
2025-05-26 15:53:03 (17960): Guest Log: Successfully finished the ATLAS job!
2025-05-26 15:53:03 (17960): Guest Log: Copying the results back to the shared directory!
2025-05-26 15:53:03 (17960): Guest Log:  *** Contents of shared directory: ***
2025-05-26 15:53:03 (17960): Guest Log: total 416784
2025-05-26 15:53:03 (17960): Guest Log: -rwxrwxrwx. 1 root root 226004502 May 26 09:24 ATLAS.root_0
2025-05-26 15:53:03 (17960): Guest Log: -rwxrwxrwx. 1 root root 198692402 May 26  2025 HITS.pool.root.1
2025-05-26 15:53:03 (17960): Guest Log: -rwxrwxrwx. 1 root root     10589 May 26 09:24 init_data.xml
2025-05-26 15:53:03 (17960): Guest Log: -rwxrwxrwx. 1 root root    508880 May 24 18:38 input.tar.gz
2025-05-26 15:53:03 (17960): Guest Log: -rwxrwxrwx. 1 root root   1546240 May 26  2025 result.tar.gz
2025-05-26 15:53:03 (17960): Guest Log: -rwxrwxrwx. 1 root root     15093 May 24 18:38 start_atlas.sh
2025-05-26 15:53:03 (17960): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-26 15:53:03 (17960): VM Completion File Detected.
2025-05-26 15:53:03 (17960): Powering off VM.
2025-05-26 15:53:04 (17960): Successfully stopped VM.
2025-05-26 15:53:04 (17960): Deregistering VM. (boinc_9d028094c30320f0, slot#2)
2025-05-26 15:53:04 (17960): Removing network bandwidth throttle group from VM.
2025-05-26 15:53:04 (17960): Removing VM from VirtualBox.
15:53:09 (17960): called boinc_finish(0)

</stderr_txt>
]]>

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