Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:25:15 (8750): wrapper (7.7.26015): starting
14:25:15 (8750): wrapper: running run_atlas (--nthreads 9)
[2025-05-24 14:25:15] Arguments: --nthreads 9
[2025-05-24 14:25:15] Threads: 9
[2025-05-24 14:25:15] Checking for CVMFS
[2025-05-24 14:25:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 14:25:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 14:25:15] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 14:25:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 14:25:16] 2.12.6.0 3369999 7788 268616 146376 3 385 26714297 32935936 12621 16776704 0 19040381 99.303 34332937 38210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 14:25:16] CVMFS is ok
[2025-05-24 14:25:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 14:25:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 14:25:16] Further information can be found at the LHC@home message board.
[2025-05-24 14:25:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 14:25:16] Checking for apptainer binary...
[2025-05-24 14:25:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 14:25:16] Running /usr/bin/apptainer --version
[2025-05-24 14:25:16] apptainer version 1.4.1-1.el9
[2025-05-24 14:25:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 14:25:16] c6-2-29-1.aglt2.org
[2025-05-24 14:25:16] apptainer works
[2025-05-24 14:25:16] Set ATHENA_PROC_NUMBER=9
[2025-05-24 14:25:16] Set ATHENA_CORE_NUMBER=9
[2025-05-24 14:25:16] Starting ATLAS job with PandaID=6665441020
[2025-05-24 14:25:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 20:44:48]  *** The last 200 lines of the pilot log: ***
[2025-05-24 20:44:48] 2025-05-25 00:44:32,023 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 20:44:48] 2025-05-25 00:44:32,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 20:44:48] 2025-05-25 00:44:32,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 20:44:48] 2025-05-25 00:44:32,024 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 20:44:48] 2025-05-25 00:44:32,038 | INFO     | fitting pss+swap vs Time
[2025-05-24 20:44:48] 2025-05-25 00:44:32,039 | INFO     | sum of square deviations: 15962107353.707018
[2025-05-24 20:44:48] 2025-05-25 00:44:32,043 | INFO     | sum of deviations: 53510292306.61023
[2025-05-24 20:44:48] 2025-05-25 00:44:32,043 | INFO     | mean x: 1748122485.094086
[2025-05-24 20:44:48] 2025-05-25 00:44:32,043 | INFO     | mean y: 2151390.86827957
[2025-05-24 20:44:48] 2025-05-25 00:44:32,043 | INFO     | -- intersect: -5858136545.575039
[2025-05-24 20:44:48] 2025-05-25 00:44:32,043 | INFO     | intersect: -5858136545.575039
[2025-05-24 20:44:48] 2025-05-25 00:44:32,044 | INFO     | chi2: 2.462389743015393
[2025-05-24 20:44:48] 2025-05-25 00:44:32,044 | INFO     | sum of square deviations: 15327107478.119946
[2025-05-24 20:44:48] 2025-05-25 00:44:32,048 | INFO     | sum of deviations: 53211777459.250656
[2025-05-24 20:44:48] 2025-05-25 00:44:32,048 | INFO     | mean x: 1748122332.599455
[2025-05-24 20:44:48] 2025-05-25 00:44:32,048 | INFO     | mean y: 2151310.2534059947
[2025-05-24 20:44:48] 2025-05-25 00:44:32,048 | INFO     | -- intersect: -6066880088.307549
[2025-05-24 20:44:48] 2025-05-25 00:44:32,048 | INFO     | intersect: -6066880088.307549
[2025-05-24 20:44:48] 2025-05-25 00:44:32,049 | INFO     | chi2: 2.4500471190470927
[2025-05-24 20:44:48] 2025-05-25 00:44:32,049 | INFO     | current chi2=2.4500471190470927 (change=0.5012457513401557 %)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,049 | INFO     | right removable region: 366
[2025-05-24 20:44:48] 2025-05-25 00:44:32,049 | INFO     | sum of square deviations: 15327040744.315994
[2025-05-24 20:44:48] 2025-05-25 00:44:32,053 | INFO     | sum of deviations: -15624683851.23704
[2025-05-24 20:44:48] 2025-05-25 00:44:32,053 | INFO     | mean x: 1748122637.5967302
[2025-05-24 20:44:48] 2025-05-25 00:44:32,053 | INFO     | mean y: 2167938.302452316
[2025-05-24 20:44:48] 2025-05-25 00:44:32,053 | INFO     | -- intersect: 1784238202.3075135
[2025-05-24 20:44:48] 2025-05-25 00:44:32,053 | INFO     | intersect: 1784238202.3075135
[2025-05-24 20:44:48] 2025-05-25 00:44:32,053 | INFO     | chi2: 0.45398339952354644
[2025-05-24 20:44:48] 2025-05-25 00:44:32,054 | INFO     | current chi2=0.45398339952354644 (change=81.56330041532713 %)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,054 | INFO     | sum of square deviations: 14708999570.010946
[2025-05-24 20:44:48] 2025-05-25 00:44:32,058 | INFO     | sum of deviations: -33585983249.524857
[2025-05-24 20:44:48] 2025-05-25 00:44:32,058 | INFO     | mean x: 1748122790.1049724
[2025-05-24 20:44:48] 2025-05-25 00:44:32,058 | INFO     | mean y: 2172365.0138121545
[2025-05-24 20:44:48] 2025-05-25 00:44:32,058 | INFO     | -- intersect: 3993771009.579859
[2025-05-24 20:44:48] 2025-05-25 00:44:32,058 | INFO     | intersect: 3993771009.579859
[2025-05-24 20:44:48] 2025-05-25 00:44:32,059 | INFO     | chi2: 0.31385524810853194
[2025-05-24 20:44:48] 2025-05-25 00:44:32,059 | INFO     | current chi2=0.31385524810853194 (change=30.866360215390777 %)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,059 | INFO     | sum of square deviations: 14107928897.916054
[2025-05-24 20:44:48] 2025-05-25 00:44:32,062 | INFO     | sum of deviations: -28875380617.361366
[2025-05-24 20:44:48] 2025-05-25 00:44:32,062 | INFO     | mean x: 1748122942.5966387
[2025-05-24 20:44:48] 2025-05-25 00:44:32,062 | INFO     | mean y: 2171169.8655462186
[2025-05-24 20:44:48] 2025-05-25 00:44:32,062 | INFO     | -- intersect: 3580138970.7151794
[2025-05-24 20:44:48] 2025-05-25 00:44:32,062 | INFO     | intersect: 3580138970.7151794
[2025-05-24 20:44:48] 2025-05-25 00:44:32,063 | INFO     | chi2: 0.3084060084042989
[2025-05-24 20:44:48] 2025-05-25 00:44:32,063 | INFO     | current chi2=0.3084060084042989 (change=1.7362270464085707 %)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,063 | INFO     | left removable region: 30
[2025-05-24 20:44:48] 2025-05-25 00:44:32,063 | INFO     | sum of square deviations: 11761953248.49701
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | sum of deviations: -11266427323.5863
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | mean x: 1748123217.0863094
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | mean y: 2166384.5029761903
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | -- intersect: 1676641938.1694984
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | intersect: 1676641938.1694984
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | chi2: 0.2583027191528341
[2025-05-24 20:44:48] 2025-05-25 00:44:32,066 | INFO     | -- intersect: 1676641938.1694984
[2025-05-24 20:44:48] 2025-05-25 00:44:32,067 | INFO     | current memory leak: -0.96 B/s (using 336 data points, chi2=0.26)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,067 | INFO     | ..............................
[2025-05-24 20:44:48] 2025-05-25 00:44:32,067 | INFO     | . Timing measurements:
[2025-05-24 20:44:48] 2025-05-25 00:44:32,067 | INFO     | . get job = 0 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,067 | INFO     | . initial setup = 3 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,067 | INFO     | . payload setup = 11 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,068 | INFO     | . stage-in = 0 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,068 | INFO     | . payload execution = 22690 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,068 | INFO     | . stage-out = 2 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,068 | INFO     | . log creation = 0 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,068 | INFO     | ..............................
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | 
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | job summary report
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | --------------------------------------------------
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | PanDA job id: 6665441020
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | task id: 44871837
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | errors: (none)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 20:44:48] 2025-05-25 00:44:32,204 | INFO     | pilot state: finished 
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | transexitcode: 0
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | exeerrorcode: 0
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | exeerrordiag: 
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | exitcode: 0
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | exitmsg: OK
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | cpuconsumptiontime: 48507 s
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | nevents: 400
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | neventsw: 0
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | pid: 26139
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | pgrp: 26139
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | corecount: 9
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | event service: False
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | sizes: {0: 2393568, 1: 2393767, 9: 2393973, 12: 2394001, 22705: 2427920, 22708: 2436889, 22710: 2437073, 22720: 2437243}
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | --------------------------------------------------
[2025-05-24 20:44:48] 2025-05-25 00:44:32,205 | INFO     | 
[2025-05-24 20:44:48] 2025-05-25 00:44:32,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-24 20:44:48] 2025-05-25 00:44:32,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 20:44:48] 2025-05-25 00:44:32,227 | INFO     | job 6665441020 has completed (purged errors)
[2025-05-24 20:44:48] 2025-05-25 00:44:32,227 | INFO     | overall cleanup function is called
[2025-05-24 20:44:48] 2025-05-25 00:44:33,234 | INFO     | --- collectZombieJob: --- 10, [26139]
[2025-05-24 20:44:48] 2025-05-25 00:44:33,234 | INFO     | zombie collector waiting for pid 26139
[2025-05-24 20:44:48] 2025-05-25 00:44:33,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 20:44:48] 2025-05-25 00:44:33,234 | INFO     | collected zombie processes
[2025-05-24 20:44:48] 2025-05-25 00:44:33,234 | INFO     | will attempt to kill all subprocesses of pid=26139
[2025-05-24 20:44:48] 2025-05-25 00:44:33,818 | INFO     | process IDs to be killed: [26139] (in reverse order)
[2025-05-24 20:44:48] 2025-05-25 00:44:33,944 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 20:44:48] 2025-05-25 00:44:33,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 20:44:48] 2025-05-25 00:44:33,958 | INFO     | did not find any defunct processes belonging to 26139
[2025-05-24 20:44:48] 2025-05-25 00:44:33,970 | INFO     | did not find any defunct processes belonging to 26139
[2025-05-24 20:44:48] 2025-05-25 00:44:33,971 | INFO     | ready for new job
[2025-05-24 20:44:48] 2025-05-25 00:44:33,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 20:44:48] 2025-05-25 00:44:33,973 | INFO     | **************************************
[2025-05-24 20:44:48] 2025-05-25 00:44:33,973 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 20:44:48] 2025-05-25 00:44:33,973 | INFO     | **************************************
[2025-05-24 20:44:48] 2025-05-25 00:44:33,973 | INFO     | 
[2025-05-24 20:44:48] 2025-05-25 00:44:33,993 | INFO     | architecture information:
[2025-05-24 20:44:48] 2025-05-25 00:44:34,002 | INFO     | executing command: cat /etc/os-release
[2025-05-24 20:44:48] 2025-05-25 00:44:34,019 | INFO     | cat /etc/os-release:
[2025-05-24 20:44:48] NAME="CentOS Linux"
[2025-05-24 20:44:48] VERSION="7 (Core)"
[2025-05-24 20:44:48] ID="centos"
[2025-05-24 20:44:48] ID_LIKE="rhel fedora"
[2025-05-24 20:44:48] VERSION_ID="7"
[2025-05-24 20:44:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 20:44:48] ANSI_COLOR="0;31"
[2025-05-24 20:44:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 20:44:48] HOME_URL="https://www.centos.org/"
[2025-05-24 20:44:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 20:44:48] 
[2025-05-24 20:44:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 20:44:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 20:44:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 20:44:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 20:44:48] 
[2025-05-24 20:44:48] 2025-05-25 00:44:34,019 | INFO     | **************************************
[2025-05-24 20:44:48] 2025-05-25 00:44:34,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-24 20:44:48] 2025-05-25 00:44:34,566 | INFO     | PID=12375 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 20:44:48] 2025-05-25 00:44:34,566 | INFO     | .. there are 25 such processes running
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | INFO     | sufficient remaining disk space (74889297920 B)
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | INFO     | update_server=False
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 20:44:48] 2025-05-25 00:44:34,567 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 20:44:48] 2025-05-25 00:44:34,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 20:44:48] 2025-05-25 00:44:34,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 20:44:48] 2025-05-25 00:44:34,741 | INFO     | all job control threads have been joined
[2025-05-24 20:44:48] 2025-05-25 00:44:35,065 | INFO     | all payload control threads have been joined
[2025-05-24 20:44:48] 2025-05-25 00:44:35,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 20:44:48] 2025-05-25 00:44:35,260 | INFO     | aborting loop
[2025-05-24 20:44:48] 2025-05-25 00:44:35,266 | INFO     | all data control threads have been joined
[2025-05-24 20:44:48] 2025-05-25 00:44:35,573 | INFO     | [job] retrieve thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:35,659 | INFO     | [payload] failed_post thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:35,726 | INFO     | [payload] validate_post thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:35,747 | INFO     | [job] control thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:35,901 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:35,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 20:44:48] 2025-05-25 00:44:35,998 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,036 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,070 | INFO     | [payload] control thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,265 | INFO     | [job] job monitor thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,272 | INFO     | [data] control thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,567 | INFO     | [data] copytool_in thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,639 | INFO     | [job] validate thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:36,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 20:44:48] 2025-05-25 00:44:37,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 20:44:48] 2025-05-25 00:44:37,946 | INFO     | [data] copytool_out thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:38,227 | INFO     | [job] queue monitor thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:40,651 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 20:44:48] 2025-05-25 00:44:42,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140582581290816)>', '<ExcThread(monitor, started 140581686716160)>']
[2025-05-24 20:44:48] 2025-05-25 00:44:42,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 20:44:48] 2025-05-25 00:44:42,614 | INFO     | [monitor] control thread has ended
[2025-05-24 20:44:48] 2025-05-25 00:44:47,418 | INFO     | all workflow threads have been joined
[2025-05-24 20:44:48] 2025-05-25 00:44:47,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 20:44:48] 2025-05-25 00:44:47,419 | INFO     | traces error code: 0
[2025-05-24 20:44:48] 2025-05-25 00:44:47,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 20:44:48] 2025-05-25 00:44:47,785 [wrapper] ==== pilot stdout END ====
[2025-05-24 20:44:48] 2025-05-25 00:44:47,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 20:44:48] 2025-05-25 00:44:47,828 [wrapper] pilotpid: 12375
[2025-05-24 20:44:48] 2025-05-25 00:44:47,854 [wrapper] Pilot exit status: 0
[2025-05-24 20:44:48] 2025-05-25 00:44:47,950 [wrapper] pandaids: 6665441020
[2025-05-24 20:44:48] 2025-05-25 00:44:48,018 [wrapper] cleanup supervisor_pilot 1576266 12376
[2025-05-24 20:44:48] 2025-05-25 00:44:48,021 [wrapper] Test setup, not cleaning
[2025-05-24 20:44:48] 2025-05-25 00:44:48,024 [wrapper] apfmon messages muted
[2025-05-24 20:44:48] 2025-05-25 00:44:48,027 [wrapper] ==== wrapper stdout END ====
[2025-05-24 20:44:48] 2025-05-25 00:44:48,030 [wrapper] ==== wrapper stderr END ====
[2025-05-24 20:44:48]  *** Error codes and diagnostics ***
[2025-05-24 20:44:48]     "exeErrorCode": 0,
[2025-05-24 20:44:48]     "exeErrorDiag": "",
[2025-05-24 20:44:48]     "pilotErrorCode": 0,
[2025-05-24 20:44:48]     "pilotErrorDiag": "",
[2025-05-24 20:44:48]  *** Listing of results directory ***
[2025-05-24 20:44:48] total 418132
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas    495897 May 24 08:38 pilot3.tar.gz
[2025-05-24 20:44:48] -rwx------. 1 boincer umatlas     37140 May 24 08:49 runpilot2-wrapper.sh
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas      5111 May 24 08:49 queuedata.json
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas       100 May 24 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 20:44:48] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 14:25 run_atlas
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas       105 May 24 14:25 job.xml
[2025-05-24 20:44:48] -rw-r--r--. 2 boincer umatlas 223748310 May 24 14:25 EVNT.44871834._000706.pool.root.1
[2025-05-24 20:44:48] -rw-r--r--. 2 boincer umatlas     15093 May 24 14:25 start_atlas.sh
[2025-05-24 20:44:48] drwxrwx--x. 2 boincer umatlas      4096 May 24 14:25 shared
[2025-05-24 20:44:48] -rw-r--r--. 2 boincer umatlas    508877 May 24 14:25 input.tar.gz
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas         0 May 24 14:25 boinc_lockfile
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas      2558 May 24 14:25 pandaJob.out
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas    988572 May 24 14:25 agis_schedconf.cvmfs.json
[2025-05-24 20:44:48] drwx------. 4 boincer umatlas      4096 May 24 14:25 pilot3
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas      6842 May 24 20:37 init_data.xml
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas 196083559 May 24 20:43 HITS.44871837._017658.pool.root.1
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas       531 May 24 20:43 boinc_task_state.xml
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas        95 May 24 20:43 pilot_heartbeat.json
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas      1040 May 24 20:44 memory_monitor_summary.json
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas   1596740 May 24 20:44 agis_ddmendpoints.agis.ALL.json
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas    483129 May 24 20:44 log.44871837._017658.job.log.tgz.1
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas      7720 May 24 20:44 heartbeat.json
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas      8192 May 24 20:44 boinc_mmap_file
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas      4870 May 24 20:44 pilotlog.txt
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas   1770079 May 24 20:44 log.44871837._017658.job.log.1
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas        28 May 24 20:44 wrapper_checkpoint.txt
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas       357 May 24 20:44 output.list
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas       620 May 24 20:44 runtime_log
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas   2273280 May 24 20:44 result.tar.gz
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas      8665 May 24 20:44 runtime_log.err
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas       658 May 24 20:44 Rr9KDmQU3c7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3mMKDmz2ZrAn.diag
[2025-05-24 20:44:48] -rw-r--r--. 1 boincer umatlas     20994 May 24 20:44 stderr.txt
[2025-05-24 20:44:48] HITS file was successfully produced:
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas 196083559 May 24 20:43 shared/HITS.pool.root.1
[2025-05-24 20:44:48]  *** Contents of shared directory: ***
[2025-05-24 20:44:48] total 412736
[2025-05-24 20:44:48] -rw-r--r--. 2 boincer umatlas 223748310 May 24 14:25 ATLAS.root_0
[2025-05-24 20:44:48] -rw-r--r--. 2 boincer umatlas     15093 May 24 14:25 start_atlas.sh
[2025-05-24 20:44:48] -rw-r--r--. 2 boincer umatlas    508877 May 24 14:25 input.tar.gz
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas 196083559 May 24 20:43 HITS.pool.root.1
[2025-05-24 20:44:48] -rw-------. 1 boincer umatlas   2273280 May 24 20:44 result.tar.gz
20:44:50 (8750): run_atlas exited; CPU time 49134.773728
20:44:50 (8750): called boinc_finish(0)

</stderr_txt>
]]>

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