Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:20:16 (1740367): wrapper (7.7.26015): starting
14:20:16 (1740367): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 14:20:16] Arguments: --nthreads 8
[2025-05-24 14:20:16] Threads: 8
[2025-05-24 14:20:16] Checking for CVMFS
[2025-05-24 14:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 14:20:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 14:20:16] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 14:20:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 14:20:17] 2.12.6.0 676006 8240 287088 146376 3 458 31450081 32503809 40904 16776704 0 95672109 99.635 82629628 36086 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 14:20:17] CVMFS is ok
[2025-05-24 14:20:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 14:20:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 14:20:17] Further information can be found at the LHC@home message board.
[2025-05-24 14:20:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 14:20:17] Checking for apptainer binary...
[2025-05-24 14:20:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 14:20:17] Running /usr/bin/apptainer --version
[2025-05-24 14:20:17] apptainer version 1.4.1-1.el9
[2025-05-24 14:20:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 14:20:18] c8-7-2.aglt2.org
[2025-05-24 14:20:18] apptainer works
[2025-05-24 14:20:18] Set ATHENA_PROC_NUMBER=8
[2025-05-24 14:20:18] Set ATHENA_CORE_NUMBER=8
[2025-05-24 14:20:18] Starting ATLAS job with PandaID=6665441029
[2025-05-24 14:20:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 16:09:30]  *** The last 200 lines of the pilot log: ***
[2025-05-24 16:09:30] 2025-05-24 20:09:15,784 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 16:09:30] 2025-05-24 20:09:15,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 16:09:30] 2025-05-24 20:09:15,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | fitting pss+swap vs Time
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | sum of square deviations: 358933662.5142865
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | sum of deviations: 9778181765.828575
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | mean x: 1748114122.2285714
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | mean y: 2493882.257142857
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | -- intersect: -47620171305.58235
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | intersect: -47620171305.58235
[2025-05-24 16:09:30] 2025-05-24 20:09:15,786 | INFO     | chi2: 1.710664613151237
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | sum of square deviations: 310065647.2399992
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | sum of deviations: 9834138727.039997
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | mean x: 1748113969.74
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | mean y: 2494057.04
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | -- intersect: -55441233560.400024
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | intersect: -55441233560.400024
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | chi2: 1.713684696117977
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | current chi2=1.713684696117977 (change=-0.17654442276540766 %)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | right removable region: 99
[2025-05-24 16:09:30] 2025-05-24 20:09:15,787 | INFO     | sum of square deviations: 310051007.2399992
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | sum of deviations: -7786481041.42
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | mean x: 1748114274.74
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | mean y: 2547624.33
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | -- intersect: 43903900436.13492
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | intersect: 43903900436.13492
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | chi2: 0.043841101687436296
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | current chi2=0.043841101687436296 (change=97.43718895273832 %)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | sum of square deviations: 265819601.93684185
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | sum of deviations: -8601558549.294737
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | mean x: 1748114427.2526317
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | mean y: 2550290.1789473686
[2025-05-24 16:09:30] 2025-05-24 20:09:15,788 | INFO     | -- intersect: 56569140892.67705
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | intersect: 56569140892.67705
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | chi2: 0.018243143190376482
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | current chi2=0.018243143190376482 (change=58.38803659533838 %)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | sum of square deviations: 226006884.09999993
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | sum of deviations: -7837525101.399999
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | mean x: 1748114579.7666667
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | mean y: 2547340.6
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | -- intersect: 60624116252.55583
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | intersect: 60624116252.55583
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | chi2: 0.01692496589723927
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | current chi2=0.01692496589723927 (change=7.225604049594754 %)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | left removable region: 30
[2025-05-24 16:09:30] 2025-05-24 20:09:15,789 | INFO     | sum of square deviations: 101833662.20289843
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | sum of deviations: -4422228603.478261
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | mean x: 1748114854.289855
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | mean y: 2537380.1739130435
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | -- intersect: 75916172847.81596
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | intersect: 75916172847.81596
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | chi2: 0.01436420923806757
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | -- intersect: 75916172847.81596
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | current memory leak: -43.43 B/s (using 69 data points, chi2=0.01)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | ..............................
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | . Timing measurements:
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | . get job = 0 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | . initial setup = 3 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | . payload setup = 30 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | . stage-in = 0 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,790 | INFO     | . payload execution = 6404 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,791 | INFO     | . stage-out = 0 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,791 | INFO     | . log creation = 0 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,791 | INFO     | ..............................
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | 
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | job summary report
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | --------------------------------------------------
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | PanDA job id: 6665441029
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | task id: 44871837
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | errors: (none)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 16:09:30] 2025-05-24 20:09:15,869 | INFO     | pilot state: finished 
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | transexitcode: 0
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | exeerrorcode: 0
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | exeerrordiag: 
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | exitcode: 0
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | exitmsg: OK
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | cpuconsumptiontime: 28367 s
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | nevents: 400
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | neventsw: 0
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | pid: 1787999
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | pgrp: 1787999
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | corecount: 8
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | event service: False
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | sizes: {0: 2392909, 1: 2393765, 12: 2393765, 18: 2393999, 22: 2394027, 6438: 2420945, 6440: 2429942, 6457: 2430056}
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | --------------------------------------------------
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | 
[2025-05-24 16:09:30] 2025-05-24 20:09:15,870 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,887 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 16:09:30] 2025-05-24 20:09:15,887 | INFO     | job 6665441029 has completed (purged errors)
[2025-05-24 16:09:30] 2025-05-24 20:09:15,887 | INFO     | overall cleanup function is called
[2025-05-24 16:09:30] 2025-05-24 20:09:16,900 | INFO     | --- collectZombieJob: --- 10, [1787999]
[2025-05-24 16:09:30] 2025-05-24 20:09:16,900 | INFO     | zombie collector waiting for pid 1787999
[2025-05-24 16:09:30] 2025-05-24 20:09:16,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 16:09:30] 2025-05-24 20:09:16,901 | INFO     | collected zombie processes
[2025-05-24 16:09:30] 2025-05-24 20:09:16,901 | INFO     | will attempt to kill all subprocesses of pid=1787999
[2025-05-24 16:09:30] 2025-05-24 20:09:17,325 | INFO     | PID=1753868 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 16:09:30] 2025-05-24 20:09:17,325 | INFO     | .. there are 94 such processes running
[2025-05-24 16:09:30] 2025-05-24 20:09:17,789 | INFO     | process IDs to be killed: [1787999] (in reverse order)
[2025-05-24 16:09:30] 2025-05-24 20:09:18,069 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 16:09:30] 2025-05-24 20:09:18,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 16:09:30] 2025-05-24 20:09:18,122 | INFO     | did not find any defunct processes belonging to 1787999
[2025-05-24 16:09:30] 2025-05-24 20:09:18,276 | INFO     | did not find any defunct processes belonging to 1787999
[2025-05-24 16:09:30] 2025-05-24 20:09:18,277 | INFO     | ready for new job
[2025-05-24 16:09:30] 2025-05-24 20:09:18,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 16:09:30] 2025-05-24 20:09:18,278 | INFO     | **************************************
[2025-05-24 16:09:30] 2025-05-24 20:09:18,279 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 16:09:30] 2025-05-24 20:09:18,279 | INFO     | **************************************
[2025-05-24 16:09:30] 2025-05-24 20:09:18,279 | INFO     | 
[2025-05-24 16:09:30] 2025-05-24 20:09:18,286 | INFO     | architecture information:
[2025-05-24 16:09:30] 2025-05-24 20:09:18,287 | INFO     | executing command: cat /etc/os-release
[2025-05-24 16:09:30] 2025-05-24 20:09:18,321 | INFO     | cat /etc/os-release:
[2025-05-24 16:09:30] NAME="CentOS Linux"
[2025-05-24 16:09:30] VERSION="7 (Core)"
[2025-05-24 16:09:30] ID="centos"
[2025-05-24 16:09:30] ID_LIKE="rhel fedora"
[2025-05-24 16:09:30] VERSION_ID="7"
[2025-05-24 16:09:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 16:09:30] ANSI_COLOR="0;31"
[2025-05-24 16:09:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 16:09:30] HOME_URL="https://www.centos.org/"
[2025-05-24 16:09:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 16:09:30] 
[2025-05-24 16:09:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 16:09:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 16:09:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 16:09:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 16:09:30] 
[2025-05-24 16:09:30] 2025-05-24 20:09:18,330 | INFO     | **************************************
[2025-05-24 16:09:30] 2025-05-24 20:09:18,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 16:09:30] 2025-05-24 20:09:19,024 | INFO     | sufficient remaining disk space (92363816960 B)
[2025-05-24 16:09:30] 2025-05-24 20:09:19,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 16:09:30] 2025-05-24 20:09:19,024 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 16:09:30] 2025-05-24 20:09:19,024 | INFO     | update_server=False
[2025-05-24 16:09:30] 2025-05-24 20:09:19,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 16:09:30] 2025-05-24 20:09:19,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 16:09:30] 2025-05-24 20:09:19,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 16:09:30] 2025-05-24 20:09:19,081 | INFO     | all data control threads have been joined
[2025-05-24 16:09:30] 2025-05-24 20:09:19,124 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-24 16:09:30] 2025-05-24 20:09:19,124 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-24 16:09:30] 2025-05-24 20:09:19,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:09:30] 2025-05-24 20:09:19,124 | INFO     | will abort loop
[2025-05-24 16:09:30] 2025-05-24 20:09:19,298 | INFO     | all job control threads have been joined
[2025-05-24 16:09:30] 2025-05-24 20:09:19,354 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 16:09:30] 2025-05-24 20:09:19,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 16:09:30] 2025-05-24 20:09:19,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 16:09:30] 2025-05-24 20:09:20,012 | INFO     | all payload control threads have been joined
[2025-05-24 16:09:30] 2025-05-24 20:09:20,030 | INFO     | [job] retrieve thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,088 | INFO     | [data] control thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,130 | INFO     | [job] job monitor thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,137 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,305 | INFO     | [job] control thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,393 | INFO     | [payload] validate_post thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,400 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,463 | INFO     | [job] validate thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,656 | INFO     | [data] copytool_in thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:20,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:09:30] 2025-05-24 20:09:21,019 | INFO     | [payload] control thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:21,059 | INFO     | [data] copytool_out thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:21,208 | INFO     | [payload] failed_post thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:21,225 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:21,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:21,892 | INFO     | [job] queue monitor thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:23,039 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 16:09:30] 2025-05-24 20:09:24,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730650036032)>', '<ExcThread(monitor, started 139730142340864)>']
[2025-05-24 16:09:30] 2025-05-24 20:09:25,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 16:09:30] 2025-05-24 20:09:25,397 | INFO     | [monitor] control thread has ended
[2025-05-24 16:09:30] 2025-05-24 20:09:29,439 | INFO     | all workflow threads have been joined
[2025-05-24 16:09:30] 2025-05-24 20:09:29,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 16:09:30] 2025-05-24 20:09:29,439 | INFO     | traces error code: 0
[2025-05-24 16:09:30] 2025-05-24 20:09:29,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 16:09:30] 2025-05-24 20:09:29,550 [wrapper] ==== pilot stdout END ====
[2025-05-24 16:09:30] 2025-05-24 20:09:29,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 16:09:30] 2025-05-24 20:09:29,556 [wrapper] pilotpid: 1753868
[2025-05-24 16:09:30] 2025-05-24 20:09:29,559 [wrapper] Pilot exit status: 0
[2025-05-24 16:09:30] 2025-05-24 20:09:29,577 [wrapper] pandaids: 6665441029
[2025-05-24 16:09:30] 2025-05-24 20:09:29,808 [wrapper] cleanup supervisor_pilot  548039 1753869
[2025-05-24 16:09:30] 2025-05-24 20:09:29,851 [wrapper] Test setup, not cleaning
[2025-05-24 16:09:30] 2025-05-24 20:09:29,866 [wrapper] apfmon messages muted
[2025-05-24 16:09:30] 2025-05-24 20:09:29,891 [wrapper] ==== wrapper stdout END ====
[2025-05-24 16:09:30] 2025-05-24 20:09:29,934 [wrapper] ==== wrapper stderr END ====
[2025-05-24 16:09:30]  *** Error codes and diagnostics ***
[2025-05-24 16:09:30]     "exeErrorCode": 0,
[2025-05-24 16:09:30]     "exeErrorDiag": "",
[2025-05-24 16:09:30]     "pilotErrorCode": 0,
[2025-05-24 16:09:30]     "pilotErrorDiag": "",
[2025-05-24 16:09:30]  *** Listing of results directory ***
[2025-05-24 16:09:30] total 420308
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas    495897 May 24 08:38 pilot3.tar.gz
[2025-05-24 16:09:30] -rwx------. 1 boincer umatlas     37140 May 24 08:52 runpilot2-wrapper.sh
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas      5111 May 24 08:52 queuedata.json
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas       100 May 24 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 16:09:30] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 14:20 run_atlas
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas       105 May 24 14:20 job.xml
[2025-05-24 16:09:30] -rw-r--r--. 2 boincer umatlas 223939334 May 24 14:20 EVNT.44871834._000707.pool.root.1
[2025-05-24 16:09:30] -rw-r--r--. 2 boincer umatlas     15093 May 24 14:20 start_atlas.sh
[2025-05-24 16:09:30] drwxrwx--x. 2 boincer umatlas      4096 May 24 14:20 shared
[2025-05-24 16:09:30] -rw-r--r--. 2 boincer umatlas    508876 May 24 14:20 input.tar.gz
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas         0 May 24 14:20 boinc_lockfile
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas      2557 May 24 14:20 pandaJob.out
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas    988572 May 24 14:20 agis_schedconf.cvmfs.json
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas   1596740 May 24 14:20 agis_ddmendpoints.agis.ALL.json
[2025-05-24 16:09:30] drwx------. 4 boincer umatlas      4096 May 24 14:20 pilot3
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas      7158 May 24 16:04 init_data.xml
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas        95 May 24 16:08 pilot_heartbeat.json
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas       530 May 24 16:08 boinc_task_state.xml
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas 200927145 May 24 16:08 HITS.44871837._017667.pool.root.1
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas      1037 May 24 16:08 memory_monitor_summary.json
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas    307196 May 24 16:08 log.44871837._017667.job.log.tgz.1
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas      7691 May 24 16:09 heartbeat.json
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas      4539 May 24 16:09 pilotlog.txt
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas      8192 May 24 16:09 boinc_mmap_file
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas    539661 May 24 16:09 log.44871837._017667.job.log.1
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas        27 May 24 16:09 wrapper_checkpoint.txt
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas       357 May 24 16:09 output.list
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas       620 May 24 16:09 runtime_log
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas    870400 May 24 16:09 result.tar.gz
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas      8649 May 24 16:09 runtime_log.err
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas       649 May 24 16:09 8r1LDmMX3c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTnMKDm0FxjSm.diag
[2025-05-24 16:09:30] -rw-r--r--. 1 boincer umatlas     20946 May 24 16:09 stderr.txt
[2025-05-24 16:09:30] HITS file was successfully produced:
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas 200927145 May 24 16:08 shared/HITS.pool.root.1
[2025-05-24 16:09:30]  *** Contents of shared directory: ***
[2025-05-24 16:09:30] total 416288
[2025-05-24 16:09:30] -rw-r--r--. 2 boincer umatlas 223939334 May 24 14:20 ATLAS.root_0
[2025-05-24 16:09:30] -rw-r--r--. 2 boincer umatlas     15093 May 24 14:20 start_atlas.sh
[2025-05-24 16:09:30] -rw-r--r--. 2 boincer umatlas    508876 May 24 14:20 input.tar.gz
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas 200927145 May 24 16:08 HITS.pool.root.1
[2025-05-24 16:09:30] -rw-------. 1 boincer umatlas    870400 May 24 16:09 result.tar.gz
16:09:32 (1740367): run_atlas exited; CPU time 28586.883915
16:09:32 (1740367): called boinc_finish(0)

</stderr_txt>
]]>

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