Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:49:10 (3188363): wrapper (7.7.26015): starting
13:49:10 (3188363): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 13:49:10] Arguments: --nthreads 8
[2025-05-24 13:49:10] Threads: 8
[2025-05-24 13:49:10] Checking for CVMFS
[2025-05-24 13:49:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 13:49:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 13:49:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 13:49:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 13:49:12] 2.12.6.0 1062744 7728 287772 146374 3 807 23452498 32935937 17629 16776704 0 30872534 99.524 35038058 33458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 13:49:12] CVMFS is ok
[2025-05-24 13:49:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 13:49:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 13:49:12] Further information can be found at the LHC@home message board.
[2025-05-24 13:49:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 13:49:12] Checking for apptainer binary...
[2025-05-24 13:49:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 13:49:12] Running /usr/bin/apptainer --version
[2025-05-24 13:49:12] apptainer version 1.4.1-1.el9
[2025-05-24 13:49:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:49:13] c6-4-5-2.aglt2.org
[2025-05-24 13:49:13] apptainer works
[2025-05-24 13:49:13] Set ATHENA_PROC_NUMBER=8
[2025-05-24 13:49:13] Set ATHENA_CORE_NUMBER=8
[2025-05-24 13:49:13] Starting ATLAS job with PandaID=6665379117
[2025-05-24 13:49:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:40:29]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:40:29] 2025-05-24 23:40:08,815 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665379117/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 19:40:29] 2025-05-24 23:40:08,816 | INFO     | extracted standard info from prmon json
[2025-05-24 19:40:29] 2025-05-24 23:40:08,816 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:40:29] 2025-05-24 23:40:08,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:40:29] 2025-05-24 23:40:08,816 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:40:29] 2025-05-24 23:40:08,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:40:29] 2025-05-24 23:40:08,931 | INFO     | fitting pss+swap vs Time
[2025-05-24 19:40:29] 2025-05-24 23:40:08,932 | INFO     | sum of square deviations: 12403320513.894758
[2025-05-24 19:40:29] 2025-05-24 23:40:08,935 | INFO     | sum of deviations: 51381537451.03525
[2025-05-24 19:40:29] 2025-05-24 23:40:08,935 | INFO     | mean x: 1748119557.9824562
[2025-05-24 19:40:29] 2025-05-24 23:40:08,935 | INFO     | mean y: 2064848.6725146198
[2025-05-24 19:40:29] 2025-05-24 23:40:08,935 | INFO     | -- intersect: -7239630666.390661
[2025-05-24 19:40:29] 2025-05-24 23:40:08,935 | INFO     | intersect: -7239630666.390661
[2025-05-24 19:40:29] 2025-05-24 23:40:08,964 | INFO     | chi2: 3.875713629118858
[2025-05-24 19:40:29] 2025-05-24 23:40:08,964 | INFO     | sum of square deviations: 11867216978.160292
[2025-05-24 19:40:29] 2025-05-24 23:40:08,967 | INFO     | sum of deviations: 79969584366.86655
[2025-05-24 19:40:29] 2025-05-24 23:40:08,985 | INFO     | mean x: 1748119405.4836795
[2025-05-24 19:40:29] 2025-05-24 23:40:08,985 | INFO     | mean y: 2072914.4302670623
[2025-05-24 19:40:29] 2025-05-24 23:40:08,985 | INFO     | -- intersect: -11777974803.367132
[2025-05-24 19:40:29] 2025-05-24 23:40:08,985 | INFO     | intersect: -11777974803.367132
[2025-05-24 19:40:29] 2025-05-24 23:40:08,985 | INFO     | chi2: 3.0834451368089164
[2025-05-24 19:40:29] 2025-05-24 23:40:08,985 | INFO     | current chi2=3.0834451368089164 (change=20.44187388762424 %)
[2025-05-24 19:40:29] 2025-05-24 23:40:08,986 | INFO     | right removable region: 336
[2025-05-24 19:40:29] 2025-05-24 23:40:08,986 | INFO     | sum of square deviations: 11867178428.18991
[2025-05-24 19:40:29] 2025-05-24 23:40:09,012 | INFO     | sum of deviations: -17113939829.528175
[2025-05-24 19:40:29] 2025-05-24 23:40:09,012 | INFO     | mean x: 1748119710.486647
[2025-05-24 19:40:29] 2025-05-24 23:40:09,012 | INFO     | mean y: 2084272.771513353
[2025-05-24 19:40:29] 2025-05-24 23:40:09,013 | INFO     | -- intersect: 2523089221.0929933
[2025-05-24 19:40:29] 2025-05-24 23:40:09,013 | INFO     | intersect: 2523089221.0929933
[2025-05-24 19:40:29] 2025-05-24 23:40:09,013 | INFO     | chi2: 1.4975451874933277
[2025-05-24 19:40:29] 2025-05-24 23:40:09,013 | INFO     | current chi2=1.4975451874933277 (change=61.360788468940775 %)
[2025-05-24 19:40:29] 2025-05-24 23:40:09,039 | INFO     | sum of square deviations: 11346731977.951761
[2025-05-24 19:40:29] 2025-05-24 23:40:09,042 | INFO     | sum of deviations: -44222196875.084335
[2025-05-24 19:40:29] 2025-05-24 23:40:09,042 | INFO     | mean x: 1748119862.9879518
[2025-05-24 19:40:29] 2025-05-24 23:40:09,042 | INFO     | mean y: 2092196.4789156627
[2025-05-24 19:40:29] 2025-05-24 23:40:09,042 | INFO     | -- intersect: 6815128839.321464
[2025-05-24 19:40:29] 2025-05-24 23:40:09,042 | INFO     | intersect: 6815128839.321464
[2025-05-24 19:40:29] 2025-05-24 23:40:09,075 | INFO     | chi2: 1.1180488173026355
[2025-05-24 19:40:29] 2025-05-24 23:40:09,075 | INFO     | current chi2=1.1180488173026355 (change=25.34122999159136 %)
[2025-05-24 19:40:29] 2025-05-24 23:40:09,075 | INFO     | sum of square deviations: 10841707425.730934
[2025-05-24 19:40:29] 2025-05-24 23:40:09,078 | INFO     | sum of deviations: -43514569246.00306
[2025-05-24 19:40:29] 2025-05-24 23:40:09,078 | INFO     | mean x: 1748120015.4923546
[2025-05-24 19:40:29] 2025-05-24 23:40:09,078 | INFO     | mean y: 2091964.1987767585
[2025-05-24 19:40:29] 2025-05-24 23:40:09,078 | INFO     | -- intersect: 7018393592.476443
[2025-05-24 19:40:29] 2025-05-24 23:40:09,078 | INFO     | intersect: 7018393592.476443
[2025-05-24 19:40:29] 2025-05-24 23:40:09,111 | INFO     | chi2: 1.0918058671905504
[2025-05-24 19:40:29] 2025-05-24 23:40:09,111 | INFO     | current chi2=1.0918058671905504 (change=2.347209684045631 %)
[2025-05-24 19:40:29] 2025-05-24 23:40:09,111 | INFO     | left removable region: 30
[2025-05-24 19:40:29] 2025-05-24 23:40:09,112 | INFO     | sum of square deviations: 8884197310.735275
[2025-05-24 19:40:29] 2025-05-24 23:40:09,114 | INFO     | sum of deviations: -18235543149.205883
[2025-05-24 19:40:29] 2025-05-24 23:40:09,114 | INFO     | mean x: 1748120289.9705882
[2025-05-24 19:40:29] 2025-05-24 23:40:09,114 | INFO     | mean y: 2102257.3104575165
[2025-05-24 19:40:29] 2025-05-24 23:40:09,142 | INFO     | -- intersect: 3590262432.371076
[2025-05-24 19:40:29] 2025-05-24 23:40:09,142 | INFO     | intersect: 3590262432.371076
[2025-05-24 19:40:29] 2025-05-24 23:40:09,142 | INFO     | chi2: 0.26836686286750744
[2025-05-24 19:40:29] 2025-05-24 23:40:09,143 | INFO     | -- intersect: 3590262432.371076
[2025-05-24 19:40:29] 2025-05-24 23:40:09,143 | INFO     | current memory leak: -2.05 B/s (using 306 data points, chi2=0.27)
[2025-05-24 19:40:29] 2025-05-24 23:40:09,143 | INFO     | ..............................
[2025-05-24 19:40:29] 2025-05-24 23:40:09,143 | INFO     | . Timing measurements:
[2025-05-24 19:40:29] 2025-05-24 23:40:09,143 | INFO     | . get job = 0 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | . initial setup = 6 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | . payload setup = 44 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | . stage-in = 0 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | . payload execution = 20843 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | . stage-out = 2 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | . log creation = 0 s
[2025-05-24 19:40:29] 2025-05-24 23:40:09,144 | INFO     | ..............................
[2025-05-24 19:40:29] 2025-05-24 23:40:10,329 | INFO     | 
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | job summary report
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | --------------------------------------------------
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | PanDA job id: 6665379117
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | task id: 44871837
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | errors: (none)
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | pilot state: finished 
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | transexitcode: 0
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | exeerrorcode: 0
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | exeerrordiag: 
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | exitcode: 0
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | exitmsg: OK
[2025-05-24 19:40:29] 2025-05-24 23:40:10,330 | INFO     | cpuconsumptiontime: 46763 s
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | nevents: 400
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | neventsw: 0
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | pid: 3212230
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | pgrp: 3212230
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | corecount: 8
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | event service: False
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | sizes: {0: 2393512, 1: 2393596, 2: 2393596, 3: 2393767, 4: 2393795, 14: 2393823, 25: 2393979, 34: 2394213, 36: 2394241, 20891: 2427170, 20892: 2427169, 20895: 2436
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | --------------------------------------------------
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | 
[2025-05-24 19:40:29] 2025-05-24 23:40:10,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:40:29] 2025-05-24 23:40:10,432 | INFO     | job 6665379117 has completed (purged errors)
[2025-05-24 19:40:29] 2025-05-24 23:40:10,433 | INFO     | overall cleanup function is called
[2025-05-24 19:40:29] 2025-05-24 23:40:11,444 | INFO     | --- collectZombieJob: --- 10, [3212230]
[2025-05-24 19:40:29] 2025-05-24 23:40:11,445 | INFO     | zombie collector waiting for pid 3212230
[2025-05-24 19:40:29] 2025-05-24 23:40:11,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:40:29] 2025-05-24 23:40:11,445 | INFO     | collected zombie processes
[2025-05-24 19:40:29] 2025-05-24 23:40:11,445 | INFO     | will attempt to kill all subprocesses of pid=3212230
[2025-05-24 19:40:29] 2025-05-24 23:40:13,048 | INFO     | process IDs to be killed: [3212230] (in reverse order)
[2025-05-24 19:40:29] 2025-05-24 23:40:13,442 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:40:29] 2025-05-24 23:40:13,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:40:29] 2025-05-24 23:40:13,590 | INFO     | did not find any defunct processes belonging to 3212230
[2025-05-24 19:40:29] 2025-05-24 23:40:13,744 | INFO     | did not find any defunct processes belonging to 3212230
[2025-05-24 19:40:29] 2025-05-24 23:40:13,745 | INFO     | ready for new job
[2025-05-24 19:40:29] 2025-05-24 23:40:13,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:40:29] 2025-05-24 23:40:13,749 | INFO     | **************************************
[2025-05-24 19:40:29] 2025-05-24 23:40:13,751 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:40:29] 2025-05-24 23:40:13,751 | INFO     | **************************************
[2025-05-24 19:40:29] 2025-05-24 23:40:13,751 | INFO     | 
[2025-05-24 19:40:29] 2025-05-24 23:40:13,788 | INFO     | architecture information:
[2025-05-24 19:40:29] 2025-05-24 23:40:13,807 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:40:29] 2025-05-24 23:40:13,856 | INFO     | cat /etc/os-release:
[2025-05-24 19:40:29] NAME="CentOS Linux"
[2025-05-24 19:40:29] VERSION="7 (Core)"
[2025-05-24 19:40:29] ID="centos"
[2025-05-24 19:40:29] ID_LIKE="rhel fedora"
[2025-05-24 19:40:29] VERSION_ID="7"
[2025-05-24 19:40:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:40:29] ANSI_COLOR="0;31"
[2025-05-24 19:40:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:40:29] HOME_URL="https://www.centos.org/"
[2025-05-24 19:40:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:40:29] 
[2025-05-24 19:40:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:40:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:40:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:40:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:40:29] 
[2025-05-24 19:40:29] 2025-05-24 23:40:13,856 | INFO     | **************************************
[2025-05-24 19:40:29] 2025-05-24 23:40:14,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 19:40:29] 2025-05-24 23:40:14,400 | INFO     | sufficient remaining disk space (75026661376 B)
[2025-05-24 19:40:29] 2025-05-24 23:40:14,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:40:29] 2025-05-24 23:40:14,401 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:40:29] 2025-05-24 23:40:14,401 | INFO     | update_server=False
[2025-05-24 19:40:29] 2025-05-24 23:40:14,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:40:29] 2025-05-24 23:40:14,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:40:29] 2025-05-24 23:40:14,402 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 19:40:29] 2025-05-24 23:40:14,402 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:40:29] 2025-05-24 23:40:14,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:40:29] 2025-05-24 23:40:14,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:40:29] 2025-05-24 23:40:14,679 | INFO     | all job control threads have been joined
[2025-05-24 19:40:29] 2025-05-24 23:40:14,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:40:29] 2025-05-24 23:40:15,178 | INFO     | all data control threads have been joined
[2025-05-24 19:40:29] 2025-05-24 23:40:15,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:40:29] 2025-05-24 23:40:15,262 | INFO     | aborting loop
[2025-05-24 19:40:29] 2025-05-24 23:40:15,407 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,407 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,436 | INFO     | all payload control threads have been joined
[2025-05-24 19:40:29] 2025-05-24 23:40:15,514 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,584 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,685 | INFO     | [job] control thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,764 | INFO     | [job] validate thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,858 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:15,876 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:16,184 | INFO     | [data] control thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:16,267 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:16,408 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:16,442 | INFO     | [payload] control thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:16,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:40:29] 2025-05-24 23:40:16,814 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:16,850 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:20,592 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:40:29] 2025-05-24 23:40:22,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503840606016)>', '<ExcThread(monitor, started 140503060305664)>']
[2025-05-24 19:40:29] 2025-05-24 23:40:22,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:40:29] 2025-05-24 23:40:22,471 | INFO     | [monitor] control thread has ended
[2025-05-24 19:40:29] 2025-05-24 23:40:27,270 | INFO     | all workflow threads have been joined
[2025-05-24 19:40:29] 2025-05-24 23:40:27,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:40:29] 2025-05-24 23:40:27,271 | INFO     | traces error code: 0
[2025-05-24 19:40:29] 2025-05-24 23:40:27,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:40:29] 2025-05-24 23:40:28,238 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:40:29] 2025-05-24 23:40:28,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:40:29] 2025-05-24 23:40:28,263 [wrapper] pilotpid: 3196448
[2025-05-24 19:40:29] 2025-05-24 23:40:28,279 [wrapper] Pilot exit status: 0
[2025-05-24 19:40:29] 2025-05-24 23:40:28,399 [wrapper] pandaids: 6665379117
[2025-05-24 19:40:29] 2025-05-24 23:40:28,831 [wrapper] cleanup supervisor_pilot 1002121 3196449
[2025-05-24 19:40:29] 2025-05-24 23:40:28,848 [wrapper] Test setup, not cleaning
[2025-05-24 19:40:29] 2025-05-24 23:40:28,874 [wrapper] apfmon messages muted
[2025-05-24 19:40:29] 2025-05-24 23:40:28,940 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:40:29] 2025-05-24 23:40:28,978 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:40:29]  *** Error codes and diagnostics ***
[2025-05-24 19:40:29]     "exeErrorCode": 0,
[2025-05-24 19:40:29]     "exeErrorDiag": "",
[2025-05-24 19:40:29]     "pilotErrorCode": 0,
[2025-05-24 19:40:29]     "pilotErrorDiag": "",
[2025-05-24 19:40:29]  *** Listing of results directory ***
[2025-05-24 19:40:29] total 420740
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas    495897 May 24 05:43 pilot3.tar.gz
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas      5111 May 24 06:06 queuedata.json
[2025-05-24 19:40:29] -rwx------. 1 boincer umatlas     37140 May 24 06:08 runpilot2-wrapper.sh
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas       100 May 24 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:40:29] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 13:49 run_atlas
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas       105 May 24 13:49 job.xml
[2025-05-24 19:40:29] -rw-r--r--. 2 boincer umatlas 221899604 May 24 13:49 EVNT.44871834._000605.pool.root.1
[2025-05-24 19:40:29] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:49 start_atlas.sh
[2025-05-24 19:40:29] drwxrwx--x. 2 boincer umatlas      4096 May 24 13:49 shared
[2025-05-24 19:40:29] -rw-r--r--. 2 boincer umatlas    508877 May 24 13:49 input.tar.gz
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas         0 May 24 13:49 boinc_lockfile
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas      2558 May 24 13:49 pandaJob.out
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas    988572 May 24 13:50 agis_schedconf.cvmfs.json
[2025-05-24 19:40:29] drwx------. 4 boincer umatlas      4096 May 24 13:50 pilot3
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas 200970509 May 24 19:38 HITS.44871837._015109.pool.root.1
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas      6856 May 24 19:38 init_data.xml
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas       531 May 24 19:38 boinc_task_state.xml
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas      1042 May 24 19:39 memory_monitor_summary.json
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas   1596740 May 24 19:39 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas    434184 May 24 19:39 log.44871837._015109.job.log.tgz.1
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas        95 May 24 19:39 pilot_heartbeat.json
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas      7719 May 24 19:40 heartbeat.json
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas        28 May 24 19:40 wrapper_checkpoint.txt
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas      4476 May 24 19:40 pilotlog.txt
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas   1630714 May 24 19:40 log.44871837._015109.job.log.1
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas       357 May 24 19:40 output.list
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas       620 May 24 19:40 runtime_log
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas   2088960 May 24 19:40 result.tar.gz
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas      8192 May 24 19:40 boinc_mmap_file
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas      8660 May 24 19:40 runtime_log.err
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas       656 May 24 19:40 rqYKDmgy0c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmE5QKDm5yzQ3m.diag
[2025-05-24 19:40:29] -rw-r--r--. 1 boincer umatlas     20997 May 24 19:40 stderr.txt
[2025-05-24 19:40:29] HITS file was successfully produced:
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas 200970509 May 24 19:38 shared/HITS.pool.root.1
[2025-05-24 19:40:29]  *** Contents of shared directory: ***
[2025-05-24 19:40:29] total 415524
[2025-05-24 19:40:29] -rw-r--r--. 2 boincer umatlas 221899604 May 24 13:49 ATLAS.root_0
[2025-05-24 19:40:29] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:49 start_atlas.sh
[2025-05-24 19:40:29] -rw-r--r--. 2 boincer umatlas    508877 May 24 13:49 input.tar.gz
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas 200970509 May 24 19:38 HITS.pool.root.1
[2025-05-24 19:40:29] -rw-------. 1 boincer umatlas   2088960 May 24 19:40 result.tar.gz
19:40:31 (3188363): run_atlas exited; CPU time 47491.220407
19:40:31 (3188363): called boinc_finish(0)

</stderr_txt>
]]>

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