Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:34:36 (2137835): wrapper (7.7.26015): starting
13:34:36 (2137835): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 13:34:36] Arguments: --nthreads 8
[2025-05-24 13:34:36] Threads: 8
[2025-05-24 13:34:36] Checking for CVMFS
[2025-05-24 13:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 13:34:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 13:34:37] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 13:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 13:34:38] 2.12.6.0 267692 8938 182208 146374 2 693 28616598 40960001 39388 16776704 0 95547925 99.767 64657762 37865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 13:34:38] CVMFS is ok
[2025-05-24 13:34:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 13:34:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 13:34:38] Further information can be found at the LHC@home message board.
[2025-05-24 13:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 13:34:38] Checking for apptainer binary...
[2025-05-24 13:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 13:34:38] Running /usr/bin/apptainer --version
[2025-05-24 13:34:38] apptainer version 1.4.1-1.el9
[2025-05-24 13:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:34:39] c8-16-1.aglt2.org
[2025-05-24 13:34:39] apptainer works
[2025-05-24 13:34:39] Set ATHENA_PROC_NUMBER=8
[2025-05-24 13:34:39] Set ATHENA_CORE_NUMBER=8
[2025-05-24 13:34:39] Starting ATLAS job with PandaID=6665440517
[2025-05-24 13:34:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 16:32:36]  *** The last 200 lines of the pilot log: ***
[2025-05-24 16:32:36] 2025-05-24 20:31:51,787 | INFO     | mean x: 1748113485.5647058
[2025-05-24 16:32:36] 2025-05-24 20:31:51,787 | INFO     | mean y: 2345564.564705882
[2025-05-24 16:32:36] 2025-05-24 20:31:51,787 | INFO     | -- intersect: -81600360790.37744
[2025-05-24 16:32:36] 2025-05-24 20:31:51,787 | INFO     | intersect: -81600360790.37744
[2025-05-24 16:32:36] 2025-05-24 20:31:51,787 | INFO     | chi2: 4.527068632330422
[2025-05-24 16:32:36] 2025-05-24 20:31:51,787 | INFO     | sum of square deviations: 1392945016.2666702
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | sum of deviations: 68816369581.79999
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | mean x: 1748113333.0666666
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | mean y: 2342879.290909091
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | -- intersect: -86360587311.31291
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | intersect: -86360587311.31291
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | chi2: 4.533580318858852
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | current chi2=4.533580318858852 (change=-0.14383891779167057 %)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,788 | INFO     | right removable region: 164
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | sum of square deviations: 1392938306.2666702
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | sum of deviations: 19229605054.466663
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | mean x: 1748113638.0666666
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | mean y: 2406087.139393939
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | -- intersect: -24130417814.045914
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | intersect: -24130417814.045914
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | chi2: 0.49650609587964206
[2025-05-24 16:32:36] 2025-05-24 20:31:51,789 | INFO     | current chi2=0.49650609587964206 (change=89.03250345413798 %)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | sum of square deviations: 1270104741.2437482
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | sum of deviations: 3352570968.9687457
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | mean x: 1748113790.56875
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | mean y: 2425611.59375
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | -- intersect: -4611898982.593374
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | intersect: -4611898982.593374
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | chi2: 0.032070792328672916
[2025-05-24 16:32:36] 2025-05-24 20:31:51,790 | INFO     | current chi2=0.032070792328672916 (change=93.54070522097936 %)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,791 | INFO     | sum of square deviations: 1154713176.2193487
[2025-05-24 16:32:36] 2025-05-24 20:31:51,791 | INFO     | sum of deviations: 320078748.2774193
[2025-05-24 16:32:36] 2025-05-24 20:31:51,791 | INFO     | mean x: 1748113943.0709677
[2025-05-24 16:32:36] 2025-05-24 20:31:51,791 | INFO     | mean y: 2429552.8838709677
[2025-05-24 16:32:36] 2025-05-24 20:31:51,791 | INFO     | -- intersect: -482135908.2780362
[2025-05-24 16:32:36] 2025-05-24 20:31:51,791 | INFO     | intersect: -482135908.2780362
[2025-05-24 16:32:36] 2025-05-24 20:31:51,792 | INFO     | chi2: 0.005022982745644611
[2025-05-24 16:32:36] 2025-05-24 20:31:51,792 | INFO     | current chi2=0.005022982745644611 (change=84.33782772135065 %)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,792 | INFO     | sum of square deviations: 1046531048.6933335
[2025-05-24 16:32:36] 2025-05-24 20:31:51,792 | INFO     | sum of deviations: 835018086.1600001
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | mean x: 1748114095.5733333
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | mean y: 2428820.94
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | -- intersect: -1392376319.6217723
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | intersect: -1392376319.6217723
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | chi2: 0.004420010938233936
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | current chi2=0.004420010938233936 (change=12.004257986621731 %)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | left removable region: 40
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | sum of square deviations: 591210792.024191
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | sum of deviations: 1134596608.0645158
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | mean x: 1748114522.5887096
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | mean y: 2428078.9032258065
[2025-05-24 16:32:36] 2025-05-24 20:31:51,793 | INFO     | -- intersect: -3352390261.010153
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | intersect: -3352390261.010153
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | chi2: 0.00047110755247960277
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | -- intersect: -3352390261.010153
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | current memory leak: 1.92 B/s (using 124 data points, chi2=0.00)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | ..............................
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . Timing measurements:
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . get job = 0 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . initial setup = 7 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . payload setup = 55 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . stage-in = 0 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . payload execution = 10387 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . stage-out = 2 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | . log creation = 0 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,794 | INFO     | ..............................
[2025-05-24 16:32:36] 2025-05-24 20:31:51,854 | INFO     | 
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | job summary report
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | --------------------------------------------------
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | PanDA job id: 6665440517
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | task id: 44871837
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | errors: (none)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | pilot state: finished 
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | transexitcode: 0
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | exeerrorcode: 0
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | exeerrordiag: 
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | exitcode: 0
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | exitmsg: OK
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | cpuconsumptiontime: 29802 s
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | nevents: 400
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | neventsw: 0
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | pid: 2202407
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | pgrp: 2202407
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | corecount: 8
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | event service: False
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | sizes: {0: 2393739, 1: 2393767, 12: 2393767, 23: 2393795, 33: 2394029, 34: 2394085, 10447: 2422610, 10448: 2422609, 10451: 2431606, 10453: 2431662, 10484: 2431832}
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | --------------------------------------------------
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | 
[2025-05-24 16:32:36] 2025-05-24 20:31:51,855 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 16:32:36] 2025-05-24 20:31:51,923 | INFO     | job 6665440517 has completed (purged errors)
[2025-05-24 16:32:36] 2025-05-24 20:31:51,923 | INFO     | overall cleanup function is called
[2025-05-24 16:32:36] 2025-05-24 20:31:52,939 | INFO     | --- collectZombieJob: --- 10, [2202407]
[2025-05-24 16:32:36] 2025-05-24 20:31:52,940 | INFO     | zombie collector waiting for pid 2202407
[2025-05-24 16:32:36] 2025-05-24 20:31:52,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 16:32:36] 2025-05-24 20:31:52,940 | INFO     | collected zombie processes
[2025-05-24 16:32:36] 2025-05-24 20:31:52,940 | INFO     | will attempt to kill all subprocesses of pid=2202407
[2025-05-24 16:32:36] 2025-05-24 20:31:56,163 | INFO     | PID=2155154 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 16:32:36] 2025-05-24 20:31:56,164 | INFO     | .. there are 73 such processes running
[2025-05-24 16:32:36] 2025-05-24 20:31:56,688 | INFO     | process IDs to be killed: [2202407] (in reverse order)
[2025-05-24 16:32:36] 2025-05-24 20:31:57,098 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 16:32:36] 2025-05-24 20:31:57,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 16:32:36] 2025-05-24 20:31:57,207 | INFO     | did not find any defunct processes belonging to 2202407
[2025-05-24 16:32:36] 2025-05-24 20:31:57,467 | INFO     | did not find any defunct processes belonging to 2202407
[2025-05-24 16:32:36] 2025-05-24 20:31:57,467 | INFO     | ready for new job
[2025-05-24 16:32:36] 2025-05-24 20:31:57,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 16:32:36] 2025-05-24 20:31:57,468 | INFO     | **************************************
[2025-05-24 16:32:36] 2025-05-24 20:31:57,469 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 16:32:36] 2025-05-24 20:31:57,469 | INFO     | **************************************
[2025-05-24 16:32:36] 2025-05-24 20:31:57,469 | INFO     | 
[2025-05-24 16:32:36] 2025-05-24 20:31:57,501 | INFO     | architecture information:
[2025-05-24 16:32:36] 2025-05-24 20:31:57,501 | INFO     | executing command: cat /etc/os-release
[2025-05-24 16:32:36] 2025-05-24 20:31:57,574 | INFO     | cat /etc/os-release:
[2025-05-24 16:32:36] NAME="CentOS Linux"
[2025-05-24 16:32:36] VERSION="7 (Core)"
[2025-05-24 16:32:36] ID="centos"
[2025-05-24 16:32:36] ID_LIKE="rhel fedora"
[2025-05-24 16:32:36] VERSION_ID="7"
[2025-05-24 16:32:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 16:32:36] ANSI_COLOR="0;31"
[2025-05-24 16:32:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 16:32:36] HOME_URL="https://www.centos.org/"
[2025-05-24 16:32:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 16:32:36] 
[2025-05-24 16:32:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 16:32:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 16:32:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 16:32:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 16:32:36] 
[2025-05-24 16:32:36] 2025-05-24 20:31:57,574 | INFO     | **************************************
[2025-05-24 16:32:36] 2025-05-24 20:31:58,077 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-24 16:32:36] 2025-05-24 20:31:58,119 | INFO     | sufficient remaining disk space (169854631936 B)
[2025-05-24 16:32:36] 2025-05-24 20:31:58,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 16:32:36] 2025-05-24 20:31:58,119 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 16:32:36] 2025-05-24 20:31:58,119 | INFO     | update_server=False
[2025-05-24 16:32:36] 2025-05-24 20:31:58,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 16:32:36] 2025-05-24 20:31:58,188 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 16:32:36] 2025-05-24 20:31:58,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 16:32:36] 2025-05-24 20:31:58,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 16:32:36] 2025-05-24 20:31:58,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:32:36] 2025-05-24 20:31:58,507 | INFO     | aborting loop
[2025-05-24 16:32:36] 2025-05-24 20:31:58,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 16:32:36] 2025-05-24 20:31:59,125 | INFO     | [job] retrieve thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:31:59,169 | INFO     | all data control threads have been joined
[2025-05-24 16:32:36] 2025-05-24 20:31:59,316 | INFO     | all payload control threads have been joined
[2025-05-24 16:32:36] 2025-05-24 20:31:59,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 16:32:36] 2025-05-24 20:31:59,509 | INFO     | all job control threads have been joined
[2025-05-24 16:32:36] 2025-05-24 20:31:59,537 | INFO     | [job] job monitor thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:31:59,727 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:31:59,799 | INFO     | [payload] failed_post thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:31:59,923 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,118 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,119 | INFO     | [data] copytool_in thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,137 | INFO     | [job] validate thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,192 | INFO     | [data] control thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,290 | INFO     | [payload] validate_post thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,334 | INFO     | [payload] control thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,516 | INFO     | [job] control thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:00,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 16:32:36] 2025-05-24 20:32:01,496 | INFO     | [data] copytool_out thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:01,956 | INFO     | [job] queue monitor thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:02,745 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 16:32:36] 2025-05-24 20:32:03,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039346083648)>', '<ExcThread(monitor, started 140038549534464)>']
[2025-05-24 16:32:36] 2025-05-24 20:32:04,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 16:32:36] 2025-05-24 20:32:04,274 | INFO     | [monitor] control thread has ended
[2025-05-24 16:32:36] 2025-05-24 20:32:08,383 | INFO     | all workflow threads have been joined
[2025-05-24 16:32:36] 2025-05-24 20:32:08,384 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 16:32:36] 2025-05-24 20:32:08,384 | INFO     | traces error code: 0
[2025-05-24 16:32:36] 2025-05-24 20:32:08,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 16:32:36] 2025-05-24 20:32:08,721 [wrapper] ==== pilot stdout END ====
[2025-05-24 16:32:36] 2025-05-24 20:32:08,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 16:32:36] 2025-05-24 20:32:08,769 [wrapper] pilotpid: 2155154
[2025-05-24 16:32:36] 2025-05-24 20:32:08,786 [wrapper] Pilot exit status: 0
[2025-05-24 16:32:36] 2025-05-24 20:32:09,140 [wrapper] pandaids: 6665440517
[2025-05-24 16:32:36] 2025-05-24 20:32:09,466 [wrapper] cleanup supervisor_pilot 2081614 2155155
[2025-05-24 16:32:36] 2025-05-24 20:32:09,468 [wrapper] Test setup, not cleaning
[2025-05-24 16:32:36] 2025-05-24 20:32:09,470 [wrapper] apfmon messages muted
[2025-05-24 16:32:36] 2025-05-24 20:32:09,478 [wrapper] ==== wrapper stdout END ====
[2025-05-24 16:32:36] 2025-05-24 20:32:09,485 [wrapper] ==== wrapper stderr END ====
[2025-05-24 16:32:36]  *** Error codes and diagnostics ***
[2025-05-24 16:32:37]     "exeErrorCode": 0,
[2025-05-24 16:32:37]     "exeErrorDiag": "",
[2025-05-24 16:32:37]     "pilotErrorCode": 0,
[2025-05-24 16:32:37]     "pilotErrorDiag": "",
[2025-05-24 16:32:37]  *** Listing of results directory ***
[2025-05-24 16:32:37] total 422332
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas      5111 May 24 08:22 queuedata.json
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas    495897 May 24 08:22 pilot3.tar.gz
[2025-05-24 16:32:37] -rwx------. 1 boincer umatlas     37140 May 24 08:24 runpilot2-wrapper.sh
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas       100 May 24 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 16:32:37] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 13:34 run_atlas
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas       105 May 24 13:34 job.xml
[2025-05-24 16:32:37] -rw-r--r--. 2 boincer umatlas 226463693 May 24 13:34 EVNT.44871834._000690.pool.root.1
[2025-05-24 16:32:37] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:34 start_atlas.sh
[2025-05-24 16:32:37] drwxrwx--x. 2 boincer umatlas      4096 May 24 13:34 shared
[2025-05-24 16:32:37] -rw-r--r--. 2 boincer umatlas    508873 May 24 13:34 input.tar.gz
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas         0 May 24 13:34 boinc_lockfile
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas      2558 May 24 13:34 pandaJob.out
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas    988572 May 24 13:35 agis_schedconf.cvmfs.json
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas   1596740 May 24 13:35 agis_ddmendpoints.agis.ALL.json
[2025-05-24 16:32:37] drwx------. 4 boincer umatlas      4096 May 24 13:36 pilot3
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas      7162 May 24 16:30 init_data.xml
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas 199761499 May 24 16:30 HITS.44871837._017247.pool.root.1
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas       531 May 24 16:30 boinc_task_state.xml
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas      1050 May 24 16:31 memory_monitor_summary.json
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas    350725 May 24 16:31 log.44871837._017247.job.log.tgz.1
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas        95 May 24 16:31 pilot_heartbeat.json
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas      7715 May 24 16:31 heartbeat.json
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas      4354 May 24 16:32 pilotlog.txt
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas    854808 May 24 16:32 log.44871837._017247.job.log.1
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas       357 May 24 16:32 output.list
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas       620 May 24 16:32 runtime_log
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas   1228800 May 24 16:32 result.tar.gz
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas      8655 May 24 16:32 runtime_log.err
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas       659 May 24 16:32 mycLDmc62c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwRRKDmd3TZUo.diag
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas      8192 May 24 16:32 boinc_mmap_file
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas        27 May 24 16:32 wrapper_checkpoint.txt
[2025-05-24 16:32:37] -rw-r--r--. 1 boincer umatlas     20981 May 24 16:32 stderr.txt
[2025-05-24 16:32:37] HITS file was successfully produced:
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas 199761499 May 24 16:30 shared/HITS.pool.root.1
[2025-05-24 16:32:37]  *** Contents of shared directory: ***
[2025-05-24 16:32:37] total 417960
[2025-05-24 16:32:37] -rw-r--r--. 2 boincer umatlas 226463693 May 24 13:34 ATLAS.root_0
[2025-05-24 16:32:37] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:34 start_atlas.sh
[2025-05-24 16:32:37] -rw-r--r--. 2 boincer umatlas    508873 May 24 13:34 input.tar.gz
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas 199761499 May 24 16:30 HITS.pool.root.1
[2025-05-24 16:32:37] -rw-------. 1 boincer umatlas   1228800 May 24 16:32 result.tar.gz
16:32:39 (2137835): run_atlas exited; CPU time 30155.580394
16:32:39 (2137835): called boinc_finish(0)

</stderr_txt>
]]>

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