Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:52:46 (1118729): wrapper (7.7.26015): starting
13:52:46 (1118729): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 13:52:46] Arguments: --nthreads 8
[2025-05-24 13:52:46] Threads: 8
[2025-05-24 13:52:46] Checking for CVMFS
[2025-05-24 13:52:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 13:52:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 13:52:47] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 13:52:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 13:52:48] 2.12.6.0 1723263 8029 264156 146374 1 701 32738681 40960000 34693 16776704 0 95916256 99.685 78357673 38876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 13:52:48] CVMFS is ok
[2025-05-24 13:52:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 13:52:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 13:52:48] Further information can be found at the LHC@home message board.
[2025-05-24 13:52:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 13:52:48] Checking for apptainer binary...
[2025-05-24 13:52:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 13:52:48] Running /usr/bin/apptainer --version
[2025-05-24 13:52:48] apptainer version 1.4.1-1.el9
[2025-05-24 13:52:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:52:48] c8-16-2.aglt2.org
[2025-05-24 13:52:48] apptainer works
[2025-05-24 13:52:48] Set ATHENA_PROC_NUMBER=8
[2025-05-24 13:52:48] Set ATHENA_CORE_NUMBER=8
[2025-05-24 13:52:48] Starting ATLAS job with PandaID=6665440453
[2025-05-24 13:52:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 15:46:06]  *** The last 200 lines of the pilot log: ***
[2025-05-24 15:46:06] 2025-05-24 19:45:38,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:46:06] 2025-05-24 19:45:40,509 | INFO     | monitor loop #422: job 0:6665440453 is in state 'finished'
[2025-05-24 15:46:06] 2025-05-24 19:45:40,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:46:06] 2025-05-24 19:45:43,014 | INFO     | monitor loop #423: job 0:6665440453 is in state 'finished'
[2025-05-24 15:46:06] 2025-05-24 19:45:43,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:46:06] 2025-05-24 19:45:45,524 | INFO     | monitor loop #424: job 0:6665440453 is in state 'finished'
[2025-05-24 15:46:06] 2025-05-24 19:45:45,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,768 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 15:46:06] 2025-05-24 19:45:47,768 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6665440453/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,768 | INFO     | extracted standard info from prmon json
[2025-05-24 15:46:06] 2025-05-24 19:45:47,768 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 15:46:06] 2025-05-24 19:45:47,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 15:46:06] 2025-05-24 19:45:47,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 15:46:06] 2025-05-24 19:45:47,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 15:46:06] 2025-05-24 19:45:47,770 | INFO     | fitting pss+swap vs Time
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | sum of square deviations: 390586062.9166671
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | sum of deviations: 21031322169.999996
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | mean x: 1748112616.6388888
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | mean y: 2316586.0
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | -- intersect: -94125772254.22606
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | intersect: -94125772254.22606
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | chi2: 3.569249729897464
[2025-05-24 15:46:06] 2025-05-24 19:45:47,771 | INFO     | sum of square deviations: 338812922.8155336
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | sum of deviations: 27033989005.54369
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | mean x: 1748112464.145631
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | mean y: 2333453.0970873786
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | -- intersect: -139480106423.8987
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | intersect: -139480106423.8987
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | chi2: 2.7095057373371394
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | current chi2=2.7095057373371394 (change=24.087527004870655 %)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | right removable region: 102
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | sum of square deviations: 338803772.8155336
[2025-05-24 15:46:06] 2025-05-24 19:45:47,772 | INFO     | sum of deviations: -3750717704.6019425
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | mean x: 1748112769.145631
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | mean y: 2388813.1067961166
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | -- intersect: 19354822401.39839
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | intersect: 19354822401.39839
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | chi2: 0.9649686894616636
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | current chi2=0.9649686894616636 (change=72.9643829239882 %)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | sum of square deviations: 291812270.20408213
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | sum of deviations: -5825562079.734694
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | mean x: 1748112921.6530612
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | mean y: 2395369.448979592
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | -- intersect: 34900654926.36955
[2025-05-24 15:46:06] 2025-05-24 19:45:47,773 | INFO     | intersect: 34900654926.36955
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | chi2: 0.9325432403866784
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | current chi2=0.9325432403866784 (change=3.3602591906971337 %)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | left removable region: 20
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | sum of square deviations: 170936620.43902448
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | sum of deviations: 350756574.1707316
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | mean x: 1748113043.6585367
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | mean y: 2420071.7560975607
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | -- intersect: -3584652966.6719813
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | intersect: -3584652966.6719813
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | chi2: 0.00027822415802562274
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | -- intersect: -3584652966.6719813
[2025-05-24 15:46:06] 2025-05-24 19:45:47,774 | INFO     | current memory leak: 2.05 B/s (using 82 data points, chi2=0.00)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | ..............................
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . Timing measurements:
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . get job = 0 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . initial setup = 6 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . payload setup = 39 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . stage-in = 0 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . payload execution = 6582 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . stage-out = 2 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | . log creation = 0 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,775 | INFO     | ..............................
[2025-05-24 15:46:06] 2025-05-24 19:45:47,889 | INFO     | 
[2025-05-24 15:46:06] 2025-05-24 19:45:47,889 | INFO     | job summary report
[2025-05-24 15:46:06] 2025-05-24 19:45:47,889 | INFO     | --------------------------------------------------
[2025-05-24 15:46:06] 2025-05-24 19:45:47,889 | INFO     | PanDA job id: 6665440453
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | task id: 44871837
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | errors: (none)
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | pilot state: finished 
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | transexitcode: 0
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | exeerrorcode: 0
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | exeerrordiag: 
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | exitcode: 0
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | exitmsg: OK
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | cpuconsumptiontime: 29011 s
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | nevents: 400
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | neventsw: 0
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | pid: 1166919
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | pgrp: 1166919
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | corecount: 8
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | event service: False
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | sizes: {0: 2393568, 1: 2393767, 11: 2393767, 22: 2393795, 27: 2394029, 33: 2394057, 6625: 2421061, 6627: 2430002, 6628: 2430058, 6660: 2430228}
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | --------------------------------------------------
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | 
[2025-05-24 15:46:06] 2025-05-24 19:45:47,890 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 15:46:06] 2025-05-24 19:45:48,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 15:46:06] 2025-05-24 19:45:48,031 | INFO     | job 6665440453 has completed (purged errors)
[2025-05-24 15:46:06] 2025-05-24 19:45:48,031 | INFO     | overall cleanup function is called
[2025-05-24 15:46:06] 2025-05-24 19:45:49,038 | INFO     | --- collectZombieJob: --- 10, [1166919]
[2025-05-24 15:46:06] 2025-05-24 19:45:49,039 | INFO     | zombie collector waiting for pid 1166919
[2025-05-24 15:46:06] 2025-05-24 19:45:49,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 15:46:06] 2025-05-24 19:45:49,039 | INFO     | collected zombie processes
[2025-05-24 15:46:06] 2025-05-24 19:45:49,039 | INFO     | will attempt to kill all subprocesses of pid=1166919
[2025-05-24 15:46:06] 2025-05-24 19:45:50,765 | INFO     | process IDs to be killed: [1166919] (in reverse order)
[2025-05-24 15:46:06] 2025-05-24 19:45:51,441 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 15:46:06] 2025-05-24 19:45:51,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 15:46:06] 2025-05-24 19:45:51,516 | INFO     | did not find any defunct processes belonging to 1166919
[2025-05-24 15:46:06] 2025-05-24 19:45:51,581 | INFO     | did not find any defunct processes belonging to 1166919
[2025-05-24 15:46:06] 2025-05-24 19:45:51,581 | INFO     | ready for new job
[2025-05-24 15:46:06] 2025-05-24 19:45:51,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 15:46:06] 2025-05-24 19:45:51,593 | INFO     | **************************************
[2025-05-24 15:46:06] 2025-05-24 19:45:51,593 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 15:46:06] 2025-05-24 19:45:51,593 | INFO     | **************************************
[2025-05-24 15:46:06] 2025-05-24 19:45:51,593 | INFO     | 
[2025-05-24 15:46:06] 2025-05-24 19:45:51,610 | INFO     | architecture information:
[2025-05-24 15:46:06] 2025-05-24 19:45:51,613 | INFO     | executing command: cat /etc/os-release
[2025-05-24 15:46:06] 2025-05-24 19:45:51,668 | INFO     | cat /etc/os-release:
[2025-05-24 15:46:06] NAME="CentOS Linux"
[2025-05-24 15:46:06] VERSION="7 (Core)"
[2025-05-24 15:46:06] ID="centos"
[2025-05-24 15:46:06] ID_LIKE="rhel fedora"
[2025-05-24 15:46:06] VERSION_ID="7"
[2025-05-24 15:46:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 15:46:06] ANSI_COLOR="0;31"
[2025-05-24 15:46:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 15:46:06] HOME_URL="https://www.centos.org/"
[2025-05-24 15:46:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 15:46:06] 
[2025-05-24 15:46:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 15:46:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 15:46:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 15:46:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 15:46:06] 
[2025-05-24 15:46:06] 2025-05-24 19:45:51,668 | INFO     | **************************************
[2025-05-24 15:46:06] 2025-05-24 19:45:52,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-05-24 15:46:06] 2025-05-24 19:45:52,293 | INFO     | sufficient remaining disk space (169539010560 B)
[2025-05-24 15:46:06] 2025-05-24 19:45:52,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 15:46:06] 2025-05-24 19:45:52,294 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 15:46:06] 2025-05-24 19:45:52,294 | INFO     | update_server=False
[2025-05-24 15:46:06] 2025-05-24 19:45:52,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 15:46:06] 2025-05-24 19:45:52,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 15:46:06] 2025-05-24 19:45:52,295 | INFO     | aborting loop
[2025-05-24 15:46:06] 2025-05-24 19:45:52,295 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 15:46:06] 2025-05-24 19:45:52,295 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 15:46:06] 2025-05-24 19:45:52,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 15:46:06] 2025-05-24 19:45:52,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 15:46:06] 2025-05-24 19:45:52,566 | INFO     | all payload control threads have been joined
[2025-05-24 15:46:06] 2025-05-24 19:45:52,765 | INFO     | all job control threads have been joined
[2025-05-24 15:46:06] 2025-05-24 19:45:52,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 15:46:06] 2025-05-24 19:45:52,934 | INFO     | all data control threads have been joined
[2025-05-24 15:46:06] 2025-05-24 19:45:53,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 15:46:06] 2025-05-24 19:45:53,300 | INFO     | [job] retrieve thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,301 | INFO     | [job] job monitor thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,458 | INFO     | [payload] failed_post thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,573 | INFO     | [payload] control thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 15:46:06] 2025-05-24 19:45:53,664 | INFO     | [data] copytool_in thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,772 | INFO     | [job] control thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,889 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,919 | INFO     | [job] queue monitor thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:53,941 | INFO     | [data] control thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:54,155 | INFO     | [payload] validate_post thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:54,334 | INFO     | [job] validate thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:54,447 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:54,474 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:55,171 | INFO     | [data] copytool_out thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:57,668 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 15:46:06] 2025-05-24 19:45:59,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611185076032)>', '<ExcThread(monitor, started 140610317055744)>']
[2025-05-24 15:46:06] 2025-05-24 19:46:00,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 15:46:06] 2025-05-24 19:46:00,367 | INFO     | [monitor] control thread has ended
[2025-05-24 15:46:06] 2025-05-24 19:46:04,455 | INFO     | all workflow threads have been joined
[2025-05-24 15:46:06] 2025-05-24 19:46:04,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 15:46:06] 2025-05-24 19:46:04,456 | INFO     | traces error code: 0
[2025-05-24 15:46:06] 2025-05-24 19:46:04,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 15:46:06] 2025-05-24 19:46:04,734 [wrapper] ==== pilot stdout END ====
[2025-05-24 15:46:06] 2025-05-24 19:46:04,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 15:46:06] 2025-05-24 19:46:04,788 [wrapper] pilotpid: 1134015
[2025-05-24 15:46:06] 2025-05-24 19:46:04,817 [wrapper] Pilot exit status: 0
[2025-05-24 15:46:06] 2025-05-24 19:46:04,980 [wrapper] pandaids: 6665440453
[2025-05-24 15:46:06] 2025-05-24 19:46:05,256 [wrapper] cleanup supervisor_pilot 3123824 1134016
[2025-05-24 15:46:06] 2025-05-24 19:46:05,319 [wrapper] Test setup, not cleaning
[2025-05-24 15:46:06] 2025-05-24 19:46:05,338 [wrapper] apfmon messages muted
[2025-05-24 15:46:06] 2025-05-24 19:46:05,347 [wrapper] ==== wrapper stdout END ====
[2025-05-24 15:46:06] 2025-05-24 19:46:05,375 [wrapper] ==== wrapper stderr END ====
[2025-05-24 15:46:06]  *** Error codes and diagnostics ***
[2025-05-24 15:46:06]     "exeErrorCode": 0,
[2025-05-24 15:46:06]     "exeErrorDiag": "",
[2025-05-24 15:46:06]     "pilotErrorCode": 0,
[2025-05-24 15:46:06]     "pilotErrorDiag": "",
[2025-05-24 15:46:06]  *** Listing of results directory ***
[2025-05-24 15:46:06] total 418328
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas    495897 May 24 08:04 pilot3.tar.gz
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas      5111 May 24 08:19 queuedata.json
[2025-05-24 15:46:06] -rwx------. 1 boincer umatlas     37140 May 24 08:19 runpilot2-wrapper.sh
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas       100 May 24 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 15:46:06] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 13:52 run_atlas
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas       105 May 24 13:52 job.xml
[2025-05-24 15:46:06] -rw-r--r--. 2 boincer umatlas 222353929 May 24 13:52 EVNT.44871834._000687.pool.root.1
[2025-05-24 15:46:06] -rw-r--r--. 2 boincer umatlas    508875 May 24 13:52 input.tar.gz
[2025-05-24 15:46:06] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:52 start_atlas.sh
[2025-05-24 15:46:06] drwxrwx--x. 2 boincer umatlas      4096 May 24 13:52 shared
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas         0 May 24 13:52 boinc_lockfile
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas      2558 May 24 13:52 pandaJob.out
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas    988572 May 24 13:53 agis_schedconf.cvmfs.json
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas   1596740 May 24 13:53 agis_ddmendpoints.agis.ALL.json
[2025-05-24 15:46:06] drwx------. 4 boincer umatlas      4096 May 24 13:53 pilot3
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas      7160 May 24 15:38 init_data.xml
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas 200395586 May 24 15:44 HITS.44871837._017183.pool.root.1
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas       530 May 24 15:44 boinc_task_state.xml
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas      1031 May 24 15:45 memory_monitor_summary.json
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas    327281 May 24 15:45 log.44871837._017183.job.log.tgz.1
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas      7687 May 24 15:45 heartbeat.json
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas        95 May 24 15:45 pilot_heartbeat.json
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas        27 May 24 15:46 wrapper_checkpoint.txt
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas      8192 May 24 15:46 boinc_mmap_file
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas      4477 May 24 15:46 pilotlog.txt
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas    567494 May 24 15:46 log.44871837._017183.job.log.1
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas       357 May 24 15:46 output.list
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas       620 May 24 15:46 runtime_log
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas    911360 May 24 15:46 result.tar.gz
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas       651 May 24 15:46 zkwNDmY12c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDRRKDm9w2Nkn.diag
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas      8654 May 24 15:46 runtime_log.err
[2025-05-24 15:46:06] -rw-r--r--. 1 boincer umatlas     21215 May 24 15:46 stderr.txt
[2025-05-24 15:46:06] HITS file was successfully produced:
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas 200395586 May 24 15:44 shared/HITS.pool.root.1
[2025-05-24 15:46:06]  *** Contents of shared directory: ***
[2025-05-24 15:46:06] total 414260
[2025-05-24 15:46:06] -rw-r--r--. 2 boincer umatlas 222353929 May 24 13:52 ATLAS.root_0
[2025-05-24 15:46:06] -rw-r--r--. 2 boincer umatlas    508875 May 24 13:52 input.tar.gz
[2025-05-24 15:46:06] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:52 start_atlas.sh
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas 200395586 May 24 15:44 HITS.pool.root.1
[2025-05-24 15:46:06] -rw-------. 1 boincer umatlas    911360 May 24 15:46 result.tar.gz
15:46:07 (1118729): run_atlas exited; CPU time 29247.094951
15:46:07 (1118729): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN