Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:32:43 (3772649): wrapper (7.7.26015): starting
13:32:43 (3772649): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 13:32:43] Arguments: --nthreads 8
[2025-05-24 13:32:43] Threads: 8
[2025-05-24 13:32:43] Checking for CVMFS
[2025-05-24 13:32:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 13:32:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 13:32:44] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 13:32:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 13:32:45] 2.12.6.0 976873 7704 265956 146374 0 479 31476937 32935937 21699 16776704 0 26892254 99.277 46148971 25592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 13:32:45] CVMFS is ok
[2025-05-24 13:32:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 13:32:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 13:32:45] Further information can be found at the LHC@home message board.
[2025-05-24 13:32:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 13:32:45] Checking for apptainer binary...
[2025-05-24 13:32:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 13:32:45] Running /usr/bin/apptainer --version
[2025-05-24 13:32:45] apptainer version 1.4.1-1.el9
[2025-05-24 13:32:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 13:32:46] c6-4-5-1.aglt2.org
[2025-05-24 13:32:46] apptainer works
[2025-05-24 13:32:46] Set ATHENA_PROC_NUMBER=8
[2025-05-24 13:32:46] Set ATHENA_CORE_NUMBER=8
[2025-05-24 13:32:46] Starting ATLAS job with PandaID=6665439854
[2025-05-24 13:32:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 22:14:37]  *** The last 200 lines of the pilot log: ***
[2025-05-24 22:14:37] 2025-05-25 02:14:16,004 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 22:14:37] 2025-05-25 02:14:16,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 22:14:37] 2025-05-25 02:14:16,005 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 22:14:37] 2025-05-25 02:14:16,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 22:14:37] 2025-05-25 02:14:16,067 | INFO     | fitting pss+swap vs Time
[2025-05-24 22:14:37] 2025-05-25 02:14:16,068 | INFO     | sum of square deviations: 40890630818.44024
[2025-05-24 22:14:37] 2025-05-25 02:14:16,113 | INFO     | sum of deviations: 332705494560.9511
[2025-05-24 22:14:37] 2025-05-25 02:14:16,113 | INFO     | mean x: 1748123657.3182712
[2025-05-24 22:14:37] 2025-05-25 02:14:16,113 | INFO     | mean y: 2059991.0805500983
[2025-05-24 22:14:37] 2025-05-25 02:14:16,113 | INFO     | -- intersect: -14221500133.100468
[2025-05-24 22:14:37] 2025-05-25 02:14:16,113 | INFO     | intersect: -14221500133.100468
[2025-05-24 22:14:37] 2025-05-25 02:14:16,114 | INFO     | chi2: 8.289631599352095
[2025-05-24 22:14:37] 2025-05-25 02:14:16,114 | INFO     | sum of square deviations: 39697429947.928566
[2025-05-24 22:14:37] 2025-05-25 02:14:16,174 | INFO     | sum of deviations: 388382846691.2852
[2025-05-24 22:14:37] 2025-05-25 02:14:16,174 | INFO     | mean x: 1748123504.8214285
[2025-05-24 22:14:37] 2025-05-25 02:14:16,174 | INFO     | mean y: 2067064.992063492
[2025-05-24 22:14:37] 2025-05-25 02:14:16,174 | INFO     | -- intersect: -17100833149.481913
[2025-05-24 22:14:37] 2025-05-25 02:14:16,174 | INFO     | intersect: -17100833149.481913
[2025-05-24 22:14:37] 2025-05-25 02:14:16,189 | INFO     | chi2: 6.737501910872243
[2025-05-24 22:14:37] 2025-05-25 02:14:16,189 | INFO     | current chi2=6.737501910872243 (change=18.723747489588845 %)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,189 | INFO     | right removable region: 503
[2025-05-24 22:14:37] 2025-05-25 02:14:16,190 | INFO     | sum of square deviations: 39697361932.569374
[2025-05-24 22:14:37] 2025-05-25 02:14:16,226 | INFO     | sum of deviations: 210051321463.00043
[2025-05-24 22:14:37] 2025-05-25 02:14:16,227 | INFO     | mean x: 1748123809.8194444
[2025-05-24 22:14:37] 2025-05-25 02:14:16,227 | INFO     | mean y: 2075649.5714285714
[2025-05-24 22:14:37] 2025-05-25 02:14:16,227 | INFO     | -- intersect: -9247801381.482529
[2025-05-24 22:14:37] 2025-05-25 02:14:16,227 | INFO     | intersect: -9247801381.482529
[2025-05-24 22:14:37] 2025-05-25 02:14:16,261 | INFO     | chi2: 5.148564184896486
[2025-05-24 22:14:37] 2025-05-25 02:14:16,261 | INFO     | current chi2=5.148564184896486 (change=37.89151998867006 %)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,262 | INFO     | sum of square deviations: 38527597197.97233
[2025-05-24 22:14:37] 2025-05-25 02:14:16,298 | INFO     | sum of deviations: 127715436832.62326
[2025-05-24 22:14:37] 2025-05-25 02:14:16,298 | INFO     | mean x: 1748123962.3166332
[2025-05-24 22:14:37] 2025-05-25 02:14:16,298 | INFO     | mean y: 2086380.394789579
[2025-05-24 22:14:37] 2025-05-25 02:14:16,298 | INFO     | -- intersect: -5792783575.746549
[2025-05-24 22:14:37] 2025-05-25 02:14:16,298 | INFO     | intersect: -5792783575.746549
[2025-05-24 22:14:37] 2025-05-25 02:14:16,299 | INFO     | chi2: 3.8373250210919307
[2025-05-24 22:14:37] 2025-05-25 02:14:16,299 | INFO     | current chi2=3.8373250210919307 (change=25.46805510653099 %)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,332 | INFO     | sum of square deviations: 37380981081.60325
[2025-05-24 22:14:37] 2025-05-25 02:14:16,368 | INFO     | sum of deviations: 72627050787.85838
[2025-05-24 22:14:37] 2025-05-25 02:14:16,368 | INFO     | mean x: 1748124114.8178139
[2025-05-24 22:14:37] 2025-05-25 02:14:16,369 | INFO     | mean y: 2093705.2206477732
[2025-05-24 22:14:37] 2025-05-25 02:14:16,369 | INFO     | -- intersect: -3394315249.1937733
[2025-05-24 22:14:37] 2025-05-25 02:14:16,369 | INFO     | intersect: -3394315249.1937733
[2025-05-24 22:14:37] 2025-05-25 02:14:16,369 | INFO     | chi2: 3.2599931013781895
[2025-05-24 22:14:37] 2025-05-25 02:14:16,369 | INFO     | current chi2=3.2599931013781895 (change=15.04516600862385 %)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,369 | INFO     | left removable region: 30
[2025-05-24 22:14:37] 2025-05-25 02:14:16,370 | INFO     | sum of square deviations: 32813562734.795013
[2025-05-24 22:14:37] 2025-05-25 02:14:16,444 | INFO     | sum of deviations: 33957510205.338345
[2025-05-24 22:14:37] 2025-05-25 02:14:16,444 | INFO     | mean x: 1748124389.319239
[2025-05-24 22:14:37] 2025-05-25 02:14:16,444 | INFO     | mean y: 2115114.0507399575
[2025-05-24 22:14:37] 2025-05-25 02:14:16,444 | INFO     | -- intersect: -1806952443.479744
[2025-05-24 22:14:37] 2025-05-25 02:14:16,444 | INFO     | intersect: -1806952443.479744
[2025-05-24 22:14:37] 2025-05-25 02:14:16,445 | INFO     | chi2: 0.9723188874134986
[2025-05-24 22:14:37] 2025-05-25 02:14:16,445 | INFO     | -- intersect: -1806952443.479744
[2025-05-24 22:14:37] 2025-05-25 02:14:16,445 | INFO     | current memory leak: 1.03 B/s (using 473 data points, chi2=0.97)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | ..............................
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . Timing measurements:
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . get job = 0 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . initial setup = 6 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . payload setup = 44 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . stage-in = 0 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . payload execution = 31072 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,446 | INFO     | . stage-out = 9 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,447 | INFO     | . log creation = 1 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,447 | INFO     | ..............................
[2025-05-24 22:14:37] 2025-05-25 02:14:16,704 | INFO     | 
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | job summary report
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | --------------------------------------------------
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | PanDA job id: 6665439854
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | task id: 44871837
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | errors: (none)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 22:14:37] 2025-05-25 02:14:16,705 | INFO     | pilot state: finished 
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | transexitcode: 0
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | exeerrorcode: 0
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | exeerrordiag: 
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | exitcode: 0
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | exitmsg: OK
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | cpuconsumptiontime: 46984 s
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | nevents: 400
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | neventsw: 0
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | pid: 3785111
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | pgrp: 3785111
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | corecount: 8
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | event service: False
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | sizes: {0: 2392911, 1: 2393596, 2: 2393624, 3: 2393823, 14: 2393823, 25: 2393851, 30: 2394213, 37: 2394241, 31122: 2431781, 31133: 2440778, 31167: 2440892}
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | --------------------------------------------------
[2025-05-24 22:14:37] 2025-05-25 02:14:16,706 | INFO     | 
[2025-05-24 22:14:37] 2025-05-25 02:14:16,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 22:14:37] 2025-05-25 02:14:16,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 22:14:37] 2025-05-25 02:14:16,890 | INFO     | job 6665439854 has completed (purged errors)
[2025-05-24 22:14:37] 2025-05-25 02:14:16,890 | INFO     | overall cleanup function is called
[2025-05-24 22:14:37] 2025-05-25 02:14:17,924 | INFO     | --- collectZombieJob: --- 10, [3785111]
[2025-05-24 22:14:37] 2025-05-25 02:14:17,925 | INFO     | zombie collector waiting for pid 3785111
[2025-05-24 22:14:37] 2025-05-25 02:14:17,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 22:14:37] 2025-05-25 02:14:17,925 | INFO     | collected zombie processes
[2025-05-24 22:14:37] 2025-05-25 02:14:17,925 | INFO     | will attempt to kill all subprocesses of pid=3785111
[2025-05-24 22:14:37] 2025-05-25 02:14:21,700 | INFO     | process IDs to be killed: [3785111] (in reverse order)
[2025-05-24 22:14:37] 2025-05-25 02:14:21,943 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 22:14:37] 2025-05-25 02:14:21,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 22:14:37] 2025-05-25 02:14:21,980 | INFO     | did not find any defunct processes belonging to 3785111
[2025-05-24 22:14:37] 2025-05-25 02:14:22,033 | INFO     | did not find any defunct processes belonging to 3785111
[2025-05-24 22:14:37] 2025-05-25 02:14:22,033 | INFO     | ready for new job
[2025-05-24 22:14:37] 2025-05-25 02:14:22,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 22:14:37] 2025-05-25 02:14:22,036 | INFO     | **************************************
[2025-05-24 22:14:37] 2025-05-25 02:14:22,036 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 22:14:37] 2025-05-25 02:14:22,036 | INFO     | **************************************
[2025-05-24 22:14:37] 2025-05-25 02:14:22,036 | INFO     | 
[2025-05-24 22:14:37] 2025-05-25 02:14:22,039 | INFO     | architecture information:
[2025-05-24 22:14:37] 2025-05-25 02:14:22,044 | INFO     | executing command: cat /etc/os-release
[2025-05-24 22:14:37] 2025-05-25 02:14:22,167 | INFO     | cat /etc/os-release:
[2025-05-24 22:14:37] NAME="CentOS Linux"
[2025-05-24 22:14:37] VERSION="7 (Core)"
[2025-05-24 22:14:37] ID="centos"
[2025-05-24 22:14:37] ID_LIKE="rhel fedora"
[2025-05-24 22:14:37] VERSION_ID="7"
[2025-05-24 22:14:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 22:14:37] ANSI_COLOR="0;31"
[2025-05-24 22:14:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 22:14:37] HOME_URL="https://www.centos.org/"
[2025-05-24 22:14:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 22:14:37] 
[2025-05-24 22:14:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 22:14:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 22:14:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 22:14:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 22:14:37] 
[2025-05-24 22:14:37] 2025-05-25 02:14:22,168 | INFO     | **************************************
[2025-05-24 22:14:37] 2025-05-25 02:14:22,633 | INFO     | PID=3776951 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-24 22:14:37] 2025-05-25 02:14:22,633 | INFO     | .. there are 38 such processes running
[2025-05-24 22:14:37] 2025-05-25 02:14:22,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 22:14:37] 2025-05-25 02:14:22,758 | INFO     | sufficient remaining disk space (75099013120 B)
[2025-05-24 22:14:37] 2025-05-25 02:14:22,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 22:14:37] 2025-05-25 02:14:22,759 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 22:14:37] 2025-05-25 02:14:22,759 | INFO     | update_server=False
[2025-05-24 22:14:37] 2025-05-25 02:14:22,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 22:14:37] 2025-05-25 02:14:22,761 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 22:14:37] 2025-05-25 02:14:22,761 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 22:14:37] 2025-05-25 02:14:22,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 22:14:37] 2025-05-25 02:14:22,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 22:14:37] 2025-05-25 02:14:22,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 22:14:37] 2025-05-25 02:14:22,865 | INFO     | aborting loop
[2025-05-24 22:14:37] 2025-05-25 02:14:23,108 | INFO     | all data control threads have been joined
[2025-05-24 22:14:37] 2025-05-25 02:14:23,716 | INFO     | all payload control threads have been joined
[2025-05-24 22:14:37] 2025-05-25 02:14:23,790 | INFO     | [job] retrieve thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:23,878 | INFO     | [job] job monitor thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:23,967 | INFO     | [payload] failed_post thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:23,970 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:23,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:23,984 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:23,984 | INFO     | [data] copytool_in thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:24,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 22:14:37] 2025-05-25 02:14:24,102 | INFO     | [payload] validate_post thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:24,115 | INFO     | [data] control thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:24,119 | INFO     | all job control threads have been joined
[2025-05-24 22:14:37] 2025-05-25 02:14:24,738 | INFO     | [payload] control thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:24,757 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:24,768 | INFO     | [job] validate thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:25,127 | INFO     | [job] control thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:25,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 22:14:37] 2025-05-25 02:14:25,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 22:14:37] 2025-05-25 02:14:26,080 | INFO     | [data] copytool_out thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:26,767 | INFO     | [job] queue monitor thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:29,920 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 22:14:37] 2025-05-25 02:14:30,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675326662464)>', '<ExcThread(monitor, started 139674576201472)>']
[2025-05-24 22:14:37] 2025-05-25 02:14:30,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 22:14:37] 2025-05-25 02:14:30,824 | INFO     | [monitor] control thread has ended
[2025-05-24 22:14:37] 2025-05-25 02:14:35,104 | INFO     | all workflow threads have been joined
[2025-05-24 22:14:37] 2025-05-25 02:14:35,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 22:14:37] 2025-05-25 02:14:35,106 | INFO     | traces error code: 0
[2025-05-24 22:14:37] 2025-05-25 02:14:35,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 22:14:37] 2025-05-25 02:14:36,017 [wrapper] ==== pilot stdout END ====
[2025-05-24 22:14:37] 2025-05-25 02:14:36,042 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 22:14:37] 2025-05-25 02:14:36,071 [wrapper] pilotpid: 3776951
[2025-05-24 22:14:37] 2025-05-25 02:14:36,098 [wrapper] Pilot exit status: 0
[2025-05-24 22:14:37] 2025-05-25 02:14:36,216 [wrapper] pandaids: 6665439854
[2025-05-24 22:14:37] 2025-05-25 02:14:36,774 [wrapper] cleanup supervisor_pilot 2452964 3776952
[2025-05-24 22:14:37] 2025-05-25 02:14:36,791 [wrapper] Test setup, not cleaning
[2025-05-24 22:14:37] 2025-05-25 02:14:36,819 [wrapper] apfmon messages muted
[2025-05-24 22:14:37] 2025-05-25 02:14:36,851 [wrapper] ==== wrapper stdout END ====
[2025-05-24 22:14:37] 2025-05-25 02:14:36,913 [wrapper] ==== wrapper stderr END ====
[2025-05-24 22:14:37]  *** Error codes and diagnostics ***
[2025-05-24 22:14:37]     "exeErrorCode": 0,
[2025-05-24 22:14:37]     "exeErrorDiag": "",
[2025-05-24 22:14:37]     "pilotErrorCode": 0,
[2025-05-24 22:14:37]     "pilotErrorDiag": "",
[2025-05-24 22:14:37]  *** Listing of results directory ***
[2025-05-24 22:14:37] total 423332
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas    495897 May 24 08:04 pilot3.tar.gz
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas      5111 May 24 08:07 queuedata.json
[2025-05-24 22:14:37] -rwx------. 1 boincer umatlas     37140 May 24 08:07 runpilot2-wrapper.sh
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas       100 May 24 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 22:14:37] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 13:32 run_atlas
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas       105 May 24 13:32 job.xml
[2025-05-24 22:14:37] -rw-r--r--. 2 boincer umatlas 226480917 May 24 13:32 EVNT.44871834._000680.pool.root.1
[2025-05-24 22:14:37] -rw-r--r--. 2 boincer umatlas    508877 May 24 13:32 input.tar.gz
[2025-05-24 22:14:37] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:32 start_atlas.sh
[2025-05-24 22:14:37] drwxrwx--x. 2 boincer umatlas      4096 May 24 13:32 shared
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas         0 May 24 13:32 boinc_lockfile
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas      2558 May 24 13:32 pandaJob.out
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas    988572 May 24 13:33 agis_schedconf.cvmfs.json
[2025-05-24 22:14:37] drwx------. 4 boincer umatlas      4096 May 24 13:33 pilot3
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas      6856 May 24 22:09 init_data.xml
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas 197358917 May 24 22:11 HITS.44871837._017013.pool.root.1
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas       531 May 24 22:11 boinc_task_state.xml
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas      1043 May 24 22:13 memory_monitor_summary.json
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas        95 May 24 22:13 pilot_heartbeat.json
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas   1596740 May 24 22:13 agis_ddmendpoints.agis.ALL.json
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas    544096 May 24 22:13 log.44871837._017013.job.log.tgz.1
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas      7722 May 24 22:14 heartbeat.json
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas      8192 May 24 22:14 boinc_mmap_file
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas        28 May 24 22:14 wrapper_checkpoint.txt
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas      4871 May 24 22:14 pilotlog.txt
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas   2369649 May 24 22:14 log.44871837._017013.job.log.1
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas       357 May 24 22:14 output.list
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas       620 May 24 22:14 runtime_log
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas   2928640 May 24 22:14 result.tar.gz
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas       656 May 24 22:14 UR0MDmRq2c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmajMKDmSkXNIo.diag
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas      8660 May 24 22:14 runtime_log.err
[2025-05-24 22:14:37] -rw-r--r--. 1 boincer umatlas     21047 May 24 22:14 stderr.txt
[2025-05-24 22:14:37] HITS file was successfully produced:
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas 197358917 May 24 22:11 shared/HITS.pool.root.1
[2025-05-24 22:14:37]  *** Contents of shared directory: ***
[2025-05-24 22:14:37] total 417292
[2025-05-24 22:14:37] -rw-r--r--. 2 boincer umatlas 226480917 May 24 13:32 ATLAS.root_0
[2025-05-24 22:14:37] -rw-r--r--. 2 boincer umatlas    508877 May 24 13:32 input.tar.gz
[2025-05-24 22:14:37] -rw-r--r--. 2 boincer umatlas     15093 May 24 13:32 start_atlas.sh
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas 197358917 May 24 22:11 HITS.pool.root.1
[2025-05-24 22:14:37] -rw-------. 1 boincer umatlas   2928640 May 24 22:14 result.tar.gz
22:14:38 (3772649): run_atlas exited; CPU time 48061.959796
22:14:38 (3772649): called boinc_finish(0)

</stderr_txt>
]]>

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