Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:16:24 (1614830): wrapper (7.7.26015): starting
16:16:24 (1614830): wrapper: running run_atlas (--nthreads 9)
[2025-05-24 16:16:25] Arguments: --nthreads 9
[2025-05-24 16:16:25] Threads: 9
[2025-05-24 16:16:25] Checking for CVMFS
[2025-05-24 16:16:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 16:16:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 16:16:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 16:16:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 16:16:27] 2.12.6.0 5047 16079 302308 146378 3 18 19900079 32935937 15306 16776704 1 37725366 99.576 48985333 23312 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 16:16:27] CVMFS is ok
[2025-05-24 16:16:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 16:16:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 16:16:27] Further information can be found at the LHC@home message board.
[2025-05-24 16:16:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 16:16:27] Checking for apptainer binary...
[2025-05-24 16:16:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 16:16:27] Running /usr/bin/apptainer --version
[2025-05-24 16:16:27] apptainer version 1.4.1-1.el9
[2025-05-24 16:16:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 16:16:28] c6-6-39-2.aglt2.org
[2025-05-24 16:16:28] apptainer works
[2025-05-24 16:16:28] Set ATHENA_PROC_NUMBER=9
[2025-05-24 16:16:28] Set ATHENA_CORE_NUMBER=9
[2025-05-24 16:16:28] Starting ATLAS job with PandaID=6665439668
[2025-05-24 16:16:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 23:49:25]  *** The last 200 lines of the pilot log: ***
[2025-05-24 23:49:25] 2025-05-25 03:48:59,707 | INFO     | monitor loop #1497: job 0:6665439668 is in state 'finished'
[2025-05-24 23:49:25] 2025-05-25 03:48:59,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 23:49:25] 2025-05-25 03:49:02,229 | INFO     | monitor loop #1498: job 0:6665439668 is in state 'finished'
[2025-05-24 23:49:25] 2025-05-25 03:49:02,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 23:49:25] 2025-05-25 03:49:04,741 | INFO     | monitor loop #1499: job 0:6665439668 is in state 'finished'
[2025-05-24 23:49:25] 2025-05-25 03:49:04,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,147 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 23:49:25] 2025-05-25 03:49:05,147 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6665439668/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,148 | INFO     | extracted standard info from prmon json
[2025-05-24 23:49:25] 2025-05-25 03:49:05,149 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 23:49:25] 2025-05-25 03:49:05,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 23:49:25] 2025-05-25 03:49:05,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 23:49:25] 2025-05-25 03:49:05,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 23:49:25] 2025-05-25 03:49:05,160 | INFO     | fitting pss+swap vs Time
[2025-05-24 23:49:25] 2025-05-25 03:49:05,161 | INFO     | sum of square deviations: 26594295814.330795
[2025-05-24 23:49:25] 2025-05-25 03:49:05,167 | INFO     | sum of deviations: 27051948132.798183
[2025-05-24 23:49:25] 2025-05-25 03:49:05,167 | INFO     | mean x: 1748131479.6643991
[2025-05-24 23:49:25] 2025-05-25 03:49:05,167 | INFO     | mean y: 2142453.464852608
[2025-05-24 23:49:25] 2025-05-25 03:49:05,167 | INFO     | -- intersect: -1776072034.6100616
[2025-05-24 23:49:25] 2025-05-25 03:49:05,167 | INFO     | intersect: -1776072034.6100616
[2025-05-24 23:49:25] 2025-05-25 03:49:05,168 | INFO     | chi2: 4.065898853293999
[2025-05-24 23:49:25] 2025-05-25 03:49:05,169 | INFO     | sum of square deviations: 25700024222.098656
[2025-05-24 23:49:25] 2025-05-25 03:49:05,181 | INFO     | sum of deviations: 69761902111.6537
[2025-05-24 23:49:25] 2025-05-25 03:49:05,181 | INFO     | mean x: 1748131327.1720183
[2025-05-24 23:49:25] 2025-05-25 03:49:05,181 | INFO     | mean y: 2149697.7912844038
[2025-05-24 23:49:25] 2025-05-25 03:49:05,181 | INFO     | -- intersect: -4743097445.580122
[2025-05-24 23:49:25] 2025-05-25 03:49:05,182 | INFO     | intersect: -4743097445.580122
[2025-05-24 23:49:25] 2025-05-25 03:49:05,182 | INFO     | chi2: 3.2555463207888327
[2025-05-24 23:49:25] 2025-05-25 03:49:05,182 | INFO     | current chi2=3.2555463207888327 (change=19.9304646215844 %)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,182 | INFO     | right removable region: 435
[2025-05-24 23:49:25] 2025-05-25 03:49:05,183 | INFO     | sum of square deviations: 25699845492.09865
[2025-05-24 23:49:25] 2025-05-25 03:49:05,187 | INFO     | sum of deviations: -66884946779.4197
[2025-05-24 23:49:25] 2025-05-25 03:49:05,187 | INFO     | mean x: 1748131632.1720183
[2025-05-24 23:49:25] 2025-05-25 03:49:05,187 | INFO     | mean y: 2158440.9655963304
[2025-05-24 23:49:25] 2025-05-25 03:49:05,188 | INFO     | -- intersect: 4551745761.138141
[2025-05-24 23:49:25] 2025-05-25 03:49:05,188 | INFO     | intersect: 4551745761.138141
[2025-05-24 23:49:25] 2025-05-25 03:49:05,188 | INFO     | chi2: 1.655796488636403
[2025-05-24 23:49:25] 2025-05-25 03:49:05,188 | INFO     | current chi2=1.655796488636403 (change=59.27600394449176 %)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,189 | INFO     | sum of square deviations: 24825727934.524345
[2025-05-24 23:49:25] 2025-05-25 03:49:05,193 | INFO     | sum of deviations: -100514496034.0023
[2025-05-24 23:49:25] 2025-05-25 03:49:05,193 | INFO     | mean x: 1748131784.675174
[2025-05-24 23:49:25] 2025-05-25 03:49:05,193 | INFO     | mean y: 2164305.3642691416
[2025-05-24 23:49:25] 2025-05-25 03:49:05,193 | INFO     | -- intersect: 7080006526.187461
[2025-05-24 23:49:25] 2025-05-25 03:49:05,193 | INFO     | intersect: 7080006526.187461
[2025-05-24 23:49:25] 2025-05-25 03:49:05,194 | INFO     | chi2: 1.3404735102051553
[2025-05-24 23:49:25] 2025-05-25 03:49:05,194 | INFO     | current chi2=1.3404735102051553 (change=19.043582988325177 %)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,194 | INFO     | left removable region: 20
[2025-05-24 23:49:25] 2025-05-25 03:49:05,195 | INFO     | sum of square deviations: 22162320553.277264
[2025-05-24 23:49:25] 2025-05-25 03:49:05,198 | INFO     | sum of deviations: -65423120547.590294
[2025-05-24 23:49:25] 2025-05-25 03:49:05,199 | INFO     | mean x: 1748131906.686747
[2025-05-24 23:49:25] 2025-05-25 03:49:05,199 | INFO     | mean y: 2173634.3108433736
[2025-05-24 23:49:25] 2025-05-25 03:49:05,199 | INFO     | -- intersect: 5162655100.5598135
[2025-05-24 23:49:25] 2025-05-25 03:49:05,199 | INFO     | intersect: 5162655100.5598135
[2025-05-24 23:49:25] 2025-05-25 03:49:05,199 | INFO     | chi2: 0.41145274168733437
[2025-05-24 23:49:25] 2025-05-25 03:49:05,200 | INFO     | -- intersect: 5162655100.5598135
[2025-05-24 23:49:25] 2025-05-25 03:49:05,200 | INFO     | current memory leak: -2.95 B/s (using 415 data points, chi2=0.41)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | ..............................
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . Timing measurements:
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . get job = 0 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . initial setup = 7 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . payload setup = 64 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . stage-in = 0 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . payload execution = 26891 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . stage-out = 4 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | . log creation = 0 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,201 | INFO     | ..............................
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | 
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | job summary report
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | --------------------------------------------------
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | PanDA job id: 6665439668
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | task id: 44871837
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | errors: (none)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 23:49:25] 2025-05-25 03:49:05,375 | INFO     | pilot state: finished 
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | transexitcode: 0
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | exeerrorcode: 0
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | exeerrordiag: 
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | exitcode: 0
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | exitmsg: OK
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | cpuconsumptiontime: 51409 s
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | nevents: 400
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | neventsw: 0
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | pid: 1635647
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | pgrp: 1635647
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | corecount: 9
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | event service: False
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | sizes: {0: 2393568, 1: 2393739, 2: 2393767, 13: 2393795, 24: 2393851, 36: 2393879, 38: 2394241, 47: 2394269, 26959: 2430111, 26960: 2430110, 26964: 2439107, 26965:
[2025-05-24 23:49:25] 2025-05-25 03:49:05,376 | INFO     | --------------------------------------------------
[2025-05-24 23:49:25] 2025-05-25 03:49:05,377 | INFO     | 
[2025-05-24 23:49:25] 2025-05-25 03:49:05,377 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 23:49:25] 2025-05-25 03:49:05,433 | INFO     | job 6665439668 has completed (purged errors)
[2025-05-24 23:49:25] 2025-05-25 03:49:05,433 | INFO     | overall cleanup function is called
[2025-05-24 23:49:25] 2025-05-25 03:49:06,453 | INFO     | --- collectZombieJob: --- 10, [1635647]
[2025-05-24 23:49:25] 2025-05-25 03:49:06,454 | INFO     | zombie collector waiting for pid 1635647
[2025-05-24 23:49:25] 2025-05-25 03:49:06,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 23:49:25] 2025-05-25 03:49:06,454 | INFO     | collected zombie processes
[2025-05-24 23:49:25] 2025-05-25 03:49:06,454 | INFO     | will attempt to kill all subprocesses of pid=1635647
[2025-05-24 23:49:25] 2025-05-25 03:49:07,002 | INFO     | process IDs to be killed: [1635647] (in reverse order)
[2025-05-24 23:49:25] 2025-05-25 03:49:07,222 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 23:49:25] 2025-05-25 03:49:07,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 23:49:25] 2025-05-25 03:49:07,251 | INFO     | did not find any defunct processes belonging to 1635647
[2025-05-24 23:49:25] 2025-05-25 03:49:07,319 | INFO     | did not find any defunct processes belonging to 1635647
[2025-05-24 23:49:25] 2025-05-25 03:49:07,320 | INFO     | ready for new job
[2025-05-24 23:49:25] 2025-05-25 03:49:07,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 23:49:25] 2025-05-25 03:49:07,327 | INFO     | **************************************
[2025-05-24 23:49:25] 2025-05-25 03:49:07,328 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 23:49:25] 2025-05-25 03:49:07,328 | INFO     | **************************************
[2025-05-24 23:49:25] 2025-05-25 03:49:07,328 | INFO     | 
[2025-05-24 23:49:25] 2025-05-25 03:49:07,348 | INFO     | architecture information:
[2025-05-24 23:49:25] 2025-05-25 03:49:07,349 | INFO     | executing command: cat /etc/os-release
[2025-05-24 23:49:25] 2025-05-25 03:49:07,386 | INFO     | cat /etc/os-release:
[2025-05-24 23:49:25] NAME="CentOS Linux"
[2025-05-24 23:49:25] VERSION="7 (Core)"
[2025-05-24 23:49:25] ID="centos"
[2025-05-24 23:49:25] ID_LIKE="rhel fedora"
[2025-05-24 23:49:25] VERSION_ID="7"
[2025-05-24 23:49:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 23:49:25] ANSI_COLOR="0;31"
[2025-05-24 23:49:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 23:49:25] HOME_URL="https://www.centos.org/"
[2025-05-24 23:49:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 23:49:25] 
[2025-05-24 23:49:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 23:49:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 23:49:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 23:49:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 23:49:25] 
[2025-05-24 23:49:25] 2025-05-25 03:49:07,386 | INFO     | **************************************
[2025-05-24 23:49:25] 2025-05-25 03:49:07,893 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-24 23:49:25] 2025-05-25 03:49:07,926 | INFO     | sufficient remaining disk space (75273076736 B)
[2025-05-24 23:49:25] 2025-05-25 03:49:07,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 23:49:25] 2025-05-25 03:49:07,927 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 23:49:25] 2025-05-25 03:49:07,927 | INFO     | update_server=False
[2025-05-24 23:49:25] 2025-05-25 03:49:07,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 23:49:25] 2025-05-25 03:49:07,927 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 23:49:25] 2025-05-25 03:49:07,928 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 23:49:25] 2025-05-25 03:49:07,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 23:49:25] 2025-05-25 03:49:07,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 23:49:25] 2025-05-25 03:49:07,939 | INFO     | all payload control threads have been joined
[2025-05-24 23:49:25] 2025-05-25 03:49:08,017 | INFO     | all data control threads have been joined
[2025-05-24 23:49:25] 2025-05-25 03:49:08,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 23:49:25] 2025-05-25 03:49:08,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 23:49:25] 2025-05-25 03:49:08,319 | INFO     | aborting loop
[2025-05-24 23:49:25] 2025-05-25 03:49:08,355 | INFO     | all job control threads have been joined
[2025-05-24 23:49:25] 2025-05-25 03:49:08,933 | INFO     | [job] retrieve thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:08,945 | INFO     | [payload] control thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,038 | INFO     | [data] control thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,326 | INFO     | [job] job monitor thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,361 | INFO     | [job] control thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,420 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,485 | INFO     | [payload] validate_post thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 23:49:25] 2025-05-25 03:49:09,776 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,780 | INFO     | [data] copytool_in thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,786 | INFO     | [job] validate thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:09,886 | INFO     | [payload] failed_post thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:10,087 | INFO     | [data] copytool_out thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:10,336 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:10,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 23:49:25] 2025-05-25 03:49:11,387 | INFO     | [job] queue monitor thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:13,595 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:18,125 | INFO     | job.realtimelogging is not enabled
[2025-05-24 23:49:25] 2025-05-25 03:49:19,131 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 23:49:25] 2025-05-25 03:49:19,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887362606912)>', '<ExcThread(monitor, started 139886271129344)>']
[2025-05-24 23:49:25] 2025-05-25 03:49:20,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 23:49:25] 2025-05-25 03:49:20,032 | INFO     | [monitor] control thread has ended
[2025-05-24 23:49:25] 2025-05-25 03:49:24,174 | INFO     | all workflow threads have been joined
[2025-05-24 23:49:25] 2025-05-25 03:49:24,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 23:49:25] 2025-05-25 03:49:24,183 | INFO     | traces error code: 0
[2025-05-24 23:49:25] 2025-05-25 03:49:24,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 23:49:25] 2025-05-25 03:49:24,618 [wrapper] ==== pilot stdout END ====
[2025-05-24 23:49:25] 2025-05-25 03:49:24,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 23:49:25] 2025-05-25 03:49:24,623 [wrapper] pilotpid: 1623028
[2025-05-24 23:49:25] 2025-05-25 03:49:24,626 [wrapper] Pilot exit status: 0
[2025-05-24 23:49:25] 2025-05-25 03:49:24,738 [wrapper] pandaids: 6665439668
[2025-05-24 23:49:25] 2025-05-25 03:49:24,839 [wrapper] cleanup supervisor_pilot 3990950 1623029
[2025-05-24 23:49:25] 2025-05-25 03:49:24,844 [wrapper] Test setup, not cleaning
[2025-05-24 23:49:25] 2025-05-25 03:49:24,849 [wrapper] apfmon messages muted
[2025-05-24 23:49:25] 2025-05-25 03:49:24,854 [wrapper] ==== wrapper stdout END ====
[2025-05-24 23:49:25] 2025-05-25 03:49:24,859 [wrapper] ==== wrapper stderr END ====
[2025-05-24 23:49:25]  *** Error codes and diagnostics ***
[2025-05-24 23:49:25]     "exeErrorCode": 0,
[2025-05-24 23:49:25]     "exeErrorDiag": "",
[2025-05-24 23:49:25]     "pilotErrorCode": 0,
[2025-05-24 23:49:25]     "pilotErrorDiag": "",
[2025-05-24 23:49:25]  *** Listing of results directory ***
[2025-05-24 23:49:25] total 419712
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas    495897 May 24 07:51 pilot3.tar.gz
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas      5111 May 24 07:56 queuedata.json
[2025-05-24 23:49:25] -rwx------. 1 boincer umatlas     37140 May 24 07:56 runpilot2-wrapper.sh
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas       100 May 24 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 23:49:25] -rwxr-xr-x. 1 boincer umatlas      7986 May 24 16:16 run_atlas
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas       105 May 24 16:16 job.xml
[2025-05-24 23:49:25] -rw-r--r--. 2 boincer umatlas 222516126 May 24 16:16 EVNT.44871834._000673.pool.root.1
[2025-05-24 23:49:25] -rw-r--r--. 2 boincer umatlas     15093 May 24 16:16 start_atlas.sh
[2025-05-24 23:49:25] drwxrwx--x. 2 boincer umatlas      4096 May 24 16:16 shared
[2025-05-24 23:49:25] -rw-r--r--. 2 boincer umatlas    508878 May 24 16:16 input.tar.gz
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas         0 May 24 16:16 boinc_lockfile
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas      2558 May 24 16:16 pandaJob.out
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas    990811 May 24 16:17 agis_schedconf.cvmfs.json
[2025-05-24 23:49:25] drwx------. 4 boincer umatlas      4096 May 24 16:17 pilot3
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas      6841 May 24 23:47 init_data.xml
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas       531 May 24 23:47 boinc_task_state.xml
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas 198351684 May 24 23:47 HITS.44871837._016827.pool.root.1
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas      1041 May 24 23:48 memory_monitor_summary.json
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas   1596740 May 24 23:48 agis_ddmendpoints.agis.ALL.json
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas        95 May 24 23:48 pilot_heartbeat.json
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas    508136 May 24 23:48 log.44871837._016827.job.log.tgz.1
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas      7719 May 24 23:49 heartbeat.json
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas      8192 May 24 23:49 boinc_mmap_file
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas        28 May 24 23:49 wrapper_checkpoint.txt
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas      4548 May 24 23:49 pilotlog.txt
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas   2032711 May 24 23:49 log.44871837._016827.job.log.1
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas       357 May 24 23:49 output.list
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas       620 May 24 23:49 runtime_log
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas   2560000 May 24 23:49 result.tar.gz
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas       658 May 24 23:49 UOhLDmVf2c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaMRKDmfZuwQo.diag
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas      8665 May 24 23:49 runtime_log.err
[2025-05-24 23:49:25] -rw-r--r--. 1 boincer umatlas     21197 May 24 23:49 stderr.txt
[2025-05-24 23:49:25] HITS file was successfully produced:
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas 198351684 May 24 23:47 shared/HITS.pool.root.1
[2025-05-24 23:49:25]  *** Contents of shared directory: ***
[2025-05-24 23:49:25] total 414032
[2025-05-24 23:49:25] -rw-r--r--. 2 boincer umatlas 222516126 May 24 16:16 ATLAS.root_0
[2025-05-24 23:49:25] -rw-r--r--. 2 boincer umatlas     15093 May 24 16:16 start_atlas.sh
[2025-05-24 23:49:25] -rw-r--r--. 2 boincer umatlas    508878 May 24 16:16 input.tar.gz
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas 198351684 May 24 23:47 HITS.pool.root.1
[2025-05-24 23:49:25] -rw-------. 1 boincer umatlas   2560000 May 24 23:49 result.tar.gz
23:49:26 (1614830): run_atlas exited; CPU time 52272.070163
23:49:26 (1614830): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN