Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:22:51 (1095375): wrapper (7.7.26015): starting
10:22:51 (1095375): wrapper: running run_atlas (--nthreads 12)
[2025-05-24 10:22:51] Arguments: --nthreads 12
[2025-05-24 10:22:51] Threads: 12
[2025-05-24 10:22:51] Checking for CVMFS
[2025-05-24 10:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 10:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 10:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 10:22:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 10:22:52] 2.11.5.0 925107 8109 227692 146374 1 338 28671465 45568000 12713 130560 0 66456383 99.805 41754052 26856 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-24 10:22:52] CVMFS is ok
[2025-05-24 10:22:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 10:22:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 10:22:52] Further information can be found at the LHC@home message board.
[2025-05-24 10:22:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 10:22:52] Checking for apptainer binary...
[2025-05-24 10:22:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 10:22:52] Running /usr/bin/apptainer --version
[2025-05-24 10:22:52] apptainer version 1.4.0-1.el9
[2025-05-24 10:22:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 10:22:52] wns0106.triumf.lcg
[2025-05-24 10:22:52] apptainer works
[2025-05-24 10:22:52] Set ATHENA_PROC_NUMBER=12
[2025-05-24 10:22:52] Set ATHENA_CORE_NUMBER=12
[2025-05-24 10:22:52] Starting ATLAS job with PandaID=6665630349
[2025-05-24 10:22:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 10:28:04]  *** The last 200 lines of the pilot log: ***
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665630349/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | extracted standard info from prmon json
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 10:28:05] 2025-05-24 17:27:50,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 10:28:05] 2025-05-24 17:27:50,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | WARNING  | wrong length of table data, x=[1748107501.0], y=[1360.0] (must be same and length>=4)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | ..............................
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . Timing measurements:
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . get job = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . initial setup = 3 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . payload setup = 27 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . stage-in = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . payload execution = 63 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . stage-out = 1 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . log creation = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | ..............................
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 10:28:05] 2025-05-24 17:27:50,140 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665630349/pilotlog.txt
[2025-05-24 10:28:05] 2025-05-24 17:27:50,173 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-24 10:28:05] - Log from pilotlog.txt -
[2025-05-24 10:28:05] 2025-05-24 17:27:50,136 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665630349/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | extracted standard info from prmon json
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 10:28:05] 2025-05-24 17:27:50,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 10:28:05] 2025-05-24 17:27:50,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | WARNING  | wrong length of table data, x=[1748107501.0], y=[1360.0] (must be same and length>=4)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | ..............................
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . Timing measurements:
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . get job = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . initial setup = 3 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . payload setup = 27 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . stage-in = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . payload execution = 63 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . stage-out = 1 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . log creation = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | ..............................
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 10:28:05] 2025-05-24 17:27:50,140 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665630349/pilotlog.txt
[2025-05-24 10:28:05] 2025-05-24 17:27:50,174 | WARNING  | 
[2025-05-24 10:28:05] [begin log extracts]
[2025-05-24 10:28:05] - Log from pilotlog.txt -
[2025-05-24 10:28:05] 2025-05-24 17:27:50,136 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6665630349/memory_monitor_summary.json (trf name=prmon)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | extracted standard info from prmon json
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 10:28:05] 2025-05-24 17:27:50,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 10:28:05] 2025-05-24 17:27:50,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 10:28:05] 2025-05-24 17:27:50,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | WARNING  | wrong length of table data, x=[1748107501.0], y=[1360.0] (must be same and length>=4)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | ..............................
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . Timing measurements:
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . get job = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . initial setup = 3 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . payload setup = 27 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . stage-in = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . payload execution = 63 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . stage-out = 1 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | . log creation = 0 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | ..............................
[2025-05-24 10:28:05] 2025-05-24 17:27:50,139 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-24 10:28:05] 2025-05-24 17:27:50,140 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6665630349/pilotlog.txt
[2025-05-24 10:28:05] [end log extracts]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,174 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,175 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-24 10:28:05] 2025-05-24 17:27:50,267 | INFO     | 
[2025-05-24 10:28:05] 2025-05-24 17:27:50,267 | INFO     | job summary report
[2025-05-24 10:28:05] 2025-05-24 17:27:50,267 | INFO     | --------------------------------------------------
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | PanDA job id: 6665630349
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | task id: 44871837
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-24 10:25:32,177 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | pilot state: failed 
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | transexitcode: 65
[2025-05-24 10:28:05] 2025-05-24 17:27:50,268 | INFO     | exeerrorcode: 65
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | exitcode: 65
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | cpuconsumptiontime: 19 s
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | nevents: 0
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | neventsw: 0
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | pid: 1116253
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | pgrp: 1116253
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | corecount: 12
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | event service: False
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | sizes: {0: 2392911, 1: 2393593, 2: 2393593, 4: 2393792, 14: 2393820, 16: 2394054, 25: 2394210, 96: 2417478, 97: 2417454, 98: 2421717, 100: 2421745, 222: 2422167}
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | --------------------------------------------------
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | 
[2025-05-24 10:28:05] 2025-05-24 17:27:50,269 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-24 10:28:05] 2025-05-24 17:27:50,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 10:28:05] 2025-05-24 17:27:50,310 | INFO     | job 6665630349 has completed (purged errors)
[2025-05-24 10:28:05] 2025-05-24 17:27:50,310 | INFO     | overall cleanup function is called
[2025-05-24 10:28:05] 2025-05-24 17:27:51,316 | INFO     | --- collectZombieJob: --- 10, [1116253]
[2025-05-24 10:28:05] 2025-05-24 17:27:51,317 | INFO     | zombie collector waiting for pid 1116253
[2025-05-24 10:28:05] 2025-05-24 17:27:51,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 10:28:05] 2025-05-24 17:27:51,319 | INFO     | collected zombie processes
[2025-05-24 10:28:05] 2025-05-24 17:27:51,319 | INFO     | will attempt to kill all subprocesses of pid=1116253
[2025-05-24 10:28:05] 2025-05-24 17:27:52,050 | INFO     | process IDs to be killed: [1116253] (in reverse order)
[2025-05-24 10:28:05] 2025-05-24 17:27:52,150 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 10:28:05] 2025-05-24 17:27:52,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 10:28:05] 2025-05-24 17:27:52,197 | INFO     | did not find any defunct processes belonging to 1116253
[2025-05-24 10:28:05] 2025-05-24 17:27:52,207 | INFO     | did not find any defunct processes belonging to 1116253
[2025-05-24 10:28:05] 2025-05-24 17:27:52,208 | INFO     | ready for new job
[2025-05-24 10:28:05] 2025-05-24 17:27:52,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 10:28:05] 2025-05-24 17:27:52,210 | INFO     | **************************************
[2025-05-24 10:28:05] 2025-05-24 17:27:52,210 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 10:28:05] 2025-05-24 17:27:52,211 | INFO     | **************************************
[2025-05-24 10:28:05] 2025-05-24 17:27:52,211 | INFO     | 
[2025-05-24 10:28:05] 2025-05-24 17:27:52,213 | INFO     | architecture information:
[2025-05-24 10:28:05] 2025-05-24 17:27:52,213 | INFO     | executing command: cat /etc/os-release
[2025-05-24 10:28:05] 2025-05-24 17:27:52,226 | INFO     | cat /etc/os-release:
[2025-05-24 10:28:05] NAME="CentOS Linux"
[2025-05-24 10:28:05] VERSION="7 (Core)"
[2025-05-24 10:28:05] ID="centos"
[2025-05-24 10:28:05] ID_LIKE="rhel fedora"
[2025-05-24 10:28:05] VERSION_ID="7"
[2025-05-24 10:28:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 10:28:05] ANSI_COLOR="0;31"
[2025-05-24 10:28:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 10:28:05] HOME_URL="https://www.centos.org/"
[2025-05-24 10:28:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 10:28:05] 
[2025-05-24 10:28:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 10:28:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 10:28:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 10:28:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 10:28:05] 
[2025-05-24 10:28:05] 2025-05-24 17:27:52,227 | INFO     | **************************************
[2025-05-24 10:28:05] 2025-05-24 17:27:52,731 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-24 10:28:05] 2025-05-24 17:27:52,786 | INFO     | sufficient remaining disk space (2166809952256 B)
[2025-05-24 10:28:05] 2025-05-24 17:27:52,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 10:28:05] 2025-05-24 17:27:52,786 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 10:28:05] 2025-05-24 17:27:52,786 | INFO     | update_server=False
[2025-05-24 10:28:05] 2025-05-24 17:27:52,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 10:28:05] 2025-05-24 17:27:52,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 10:28:05] 2025-05-24 17:27:52,788 | INFO     | aborting loop
[2025-05-24 10:28:05] 2025-05-24 17:27:52,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 10:28:05] 2025-05-24 17:27:52,795 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-24 10:28:05] 2025-05-24 17:27:52,796 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 10:28:05] 2025-05-24 17:27:52,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 10:28:05] 2025-05-24 17:27:52,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 10:28:05] 2025-05-24 17:27:52,811 | INFO     | all data control threads have been joined
[2025-05-24 10:28:05] 2025-05-24 17:27:53,215 | INFO     | all payload control threads have been joined
[2025-05-24 10:28:05] 2025-05-24 17:27:53,452 | INFO     | all job control threads have been joined
[2025-05-24 10:28:05] 2025-05-24 17:27:53,791 | INFO     | [job] retrieve thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:53,794 | INFO     | [job] job monitor thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:53,817 | INFO     | [data] control thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,090 | INFO     | [payload] failed_post thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,221 | INFO     | [payload] control thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,340 | INFO     | [job] validate thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,395 | INFO     | [data] copytool_in thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,438 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,448 | INFO     | [payload] validate_post thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,458 | INFO     | [job] control thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,548 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,677 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,800 | INFO     | [data] copytool_out thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:54,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:55,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 10:28:05] 2025-05-24 17:27:55,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 10:28:05] 2025-05-24 17:27:56,283 | INFO     | [job] queue monitor thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:59,260 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 10:28:05] 2025-05-24 17:27:59,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949425456960)>', '<ExcThread(monitor, started 139948892092160)>']
[2025-05-24 10:28:05] 2025-05-24 17:27:59,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 10:28:05] 2025-05-24 17:27:59,841 | INFO     | [monitor] control thread has ended
[2025-05-24 10:28:05] 2025-05-24 17:28:04,723 | INFO     | all workflow threads have been joined
[2025-05-24 10:28:05] 2025-05-24 17:28:04,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 10:28:05] 2025-05-24 17:28:04,724 | INFO     | traces error code: 0
[2025-05-24 10:28:05] 2025-05-24 17:28:04,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 10:28:05] 2025-05-24 17:28:04,848 [wrapper] ==== pilot stdout END ====
[2025-05-24 10:28:05] 2025-05-24 17:28:04,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 10:28:05] 2025-05-24 17:28:04,854 [wrapper] pilotpid: 1100866
[2025-05-24 10:28:05] 2025-05-24 17:28:04,856 [wrapper] Pilot exit status: 0
[2025-05-24 10:28:05] 2025-05-24 17:28:04,865 [wrapper] pandaids: 6665630349
[2025-05-24 10:28:05] 2025-05-24 17:28:04,926 [wrapper] cleanup supervisor_pilot 1100872 1100867
[2025-05-24 10:28:05] 2025-05-24 17:28:04,930 [wrapper] Test setup, not cleaning
[2025-05-24 10:28:05] 2025-05-24 17:28:04,933 [wrapper] apfmon messages muted
[2025-05-24 10:28:05] 2025-05-24 17:28:04,935 [wrapper] ==== wrapper stdout END ====
[2025-05-24 10:28:05] 2025-05-24 17:28:04,937 [wrapper] ==== wrapper stderr END ====
[2025-05-24 10:28:05]  *** Error codes and diagnostics ***
[2025-05-24 10:28:05]     "exeErrorCode": 65,
[2025-05-24 10:28:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 10:28:05]     "pilotErrorCode": 1305,
[2025-05-24 10:28:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-24 10:28:05]  *** Listing of results directory ***
[2025-05-24 10:28:05] total 222604
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc    495897 May 24 07:30 pilot3.tar.gz
[2025-05-24 10:28:05] -rwx------. 1 boinc boinc     37140 May 24 07:44 runpilot2-wrapper.sh
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc      5111 May 24 07:44 queuedata.json
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc       100 May 24 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 10:28:05] -rwxr-xr-x. 1 boinc boinc      7986 May 24 10:22 run_atlas
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc       105 May 24 10:22 job.xml
[2025-05-24 10:28:05] -rw-r--r--. 2 boinc boinc 223909357 May 24 10:22 EVNT.44871834._000759.pool.root.1
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc      6598 May 24 10:22 init_data.xml
[2025-05-24 10:28:05] -rw-r--r--. 2 boinc boinc     15093 May 24 10:22 start_atlas.sh
[2025-05-24 10:28:05] drwxrwx--x. 2 boinc boinc      4096 May 24 10:22 shared
[2025-05-24 10:28:05] -rw-r--r--. 2 boinc boinc    508875 May 24 10:22 input.tar.gz
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc         0 May 24 10:22 boinc_lockfile
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc      2558 May 24 10:22 pandaJob.out
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc    988572 May 24 10:23 agis_schedconf.cvmfs.json
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc   1596740 May 24 10:23 agis_ddmendpoints.agis.ALL.json
[2025-05-24 10:28:05] drwx------. 4 boinc boinc      4096 May 24 10:23 pilot3
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc       525 May 24 10:25 boinc_task_state.xml
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc       949 May 24 10:25 memory_monitor_summary.json
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc     21277 May 24 10:25 log.44871837._019044.job.log.tgz.1
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc        95 May 24 10:27 pilot_heartbeat.json
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc      8342 May 24 10:27 heartbeat.json
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc        23 May 24 10:28 wrapper_checkpoint.txt
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc      8192 May 24 10:28 boinc_mmap_file
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc      4475 May 24 10:28 pilotlog.txt
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc     78733 May 24 10:28 log.44871837._019044.job.log.1
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc       188 May 24 10:28 output.list
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc       620 May 24 10:28 runtime_log
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc    122880 May 24 10:28 result.tar.gz
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc       645 May 24 10:28 S4oNDm1H5c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWjRKDmxi44Lm.diag
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc      8484 May 24 10:28 runtime_log.err
[2025-05-24 10:28:05] -rw-r--r--. 1 boinc boinc     21738 May 24 10:28 stderr.txt
[2025-05-24 10:28:05] No HITS result produced
[2025-05-24 10:28:05]  *** Contents of shared directory: ***
[2025-05-24 10:28:05] total 219304
[2025-05-24 10:28:05] -rw-r--r--. 2 boinc boinc 223909357 May 24 10:22 ATLAS.root_0
[2025-05-24 10:28:05] -rw-r--r--. 2 boinc boinc     15093 May 24 10:22 start_atlas.sh
[2025-05-24 10:28:05] -rw-r--r--. 2 boinc boinc    508875 May 24 10:22 input.tar.gz
[2025-05-24 10:28:05] -rw-------. 1 boinc boinc    122880 May 24 10:28 result.tar.gz
10:28:06 (1095375): run_atlas exited; CPU time 30.093071
10:28:06 (1095375): called boinc_finish(0)

</stderr_txt>
]]>

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