Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:21 (2176597): wrapper (7.7.26015): starting
06:44:21 (2176597): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 06:44:21] Arguments: --nthreads 6
[2025-05-25 06:44:21] Threads: 6
[2025-05-25 06:44:21] Checking for CVMFS
[2025-05-25 06:44:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 06:44:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 06:44:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 06:44:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 06:44:21] 2.11.5.0 1578993 742 69192 146380 1 56 41577863 52428801 1858 130560 0 1645126 99.995 230437 112 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 06:44:21] CVMFS is ok
[2025-05-25 06:44:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 06:44:21] Checking for apptainer binary...
[2025-05-25 06:44:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 06:44:21] Running /usr/bin/apptainer --version
[2025-05-25 06:44:22] apptainer version 1.3.5-1.el9
[2025-05-25 06:44:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 06:44:22] testio008
[2025-05-25 06:44:22] apptainer works
[2025-05-25 06:44:22] Set ATHENA_PROC_NUMBER=6
[2025-05-25 06:44:22] Set ATHENA_CORE_NUMBER=6
[2025-05-25 06:44:22] Starting ATLAS job with PandaID=6665376035
[2025-05-25 06:44:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 08:13:10]  *** The last 200 lines of the pilot log: ***
[2025-05-25 08:13:10] 2025-05-24 23:12:09,457 | INFO     | .. there are 3 such processes running
[2025-05-25 08:13:10] 2025-05-24 23:12:10,883 | INFO     | monitor loop #401: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:10,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:13,386 | INFO     | monitor loop #402: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:13,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:15,889 | INFO     | monitor loop #403: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:15,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:18,392 | INFO     | monitor loop #404: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:18,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:20,895 | INFO     | monitor loop #405: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:20,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:23,398 | INFO     | monitor loop #406: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:23,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:25,901 | INFO     | monitor loop #407: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:25,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:28,404 | INFO     | monitor loop #408: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:28,404 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:30,906 | INFO     | monitor loop #409: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:30,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:31,592 | INFO     | PID=2180297 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 08:13:10] 2025-05-24 23:12:31,593 | INFO     | .. there are 3 such processes running
[2025-05-25 08:13:10] 2025-05-24 23:12:33,409 | INFO     | monitor loop #410: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:33,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:35,912 | INFO     | monitor loop #411: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:35,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:38,415 | INFO     | monitor loop #412: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:38,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:40,917 | INFO     | monitor loop #413: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:40,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:43,419 | INFO     | monitor loop #414: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:43,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:45,922 | INFO     | monitor loop #415: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:45,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:48,424 | INFO     | monitor loop #416: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:48,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:50,927 | INFO     | monitor loop #417: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:50,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:53,429 | INFO     | monitor loop #418: job 0:6665376035 is in state 'finished'
[2025-05-25 08:13:10] 2025-05-24 23:12:53,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-25 08:13:10] 2025-05-24 23:12:53,687 | INFO     | PID=2180297 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 08:13:10] 2025-05-24 23:12:53,688 | INFO     | .. there are 3 such processes running
[2025-05-25 08:13:10] 2025-05-24 23:12:55,503 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 08:13:10] 2025-05-24 23:12:55,503 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6665376035/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 08:13:10] 2025-05-24 23:12:55,504 | INFO     | extracted standard info from prmon json
[2025-05-25 08:13:10] 2025-05-24 23:12:55,504 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 08:13:10] 2025-05-24 23:12:55,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 08:13:10] 2025-05-24 23:12:55,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 08:13:10] 2025-05-24 23:12:55,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | fitting pss+swap vs Time
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | sum of square deviations: 152858680.0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | sum of deviations: 13002920186.0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | mean x: 1748125775.0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | mean y: 2376049.9493670887
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | -- intersect: -148701903794.76993
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | intersect: -148701903794.76993
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | chi2: 1.3165091553397577
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | -- intersect: -148701903794.76993
[2025-05-25 08:13:10] 2025-05-24 23:12:55,505 | INFO     | current memory leak: 85.06 B/s (using 79 data points, chi2=1.32)
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | ..............................
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . Timing measurements:
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . get job = 0 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . initial setup = 5 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . payload setup = 3 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . stage-in = 0 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . payload execution = 5204 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . stage-out = 0 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | . log creation = 0 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,506 | INFO     | ..............................
[2025-05-25 08:13:10] 2025-05-24 23:12:55,550 | INFO     | 
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | job summary report
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | --------------------------------------------------
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | PanDA job id: 6665376035
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | task id: 44871837
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | errors: (none)
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | pilot state: finished 
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | transexitcode: 0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | exeerrorcode: 0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | exeerrordiag: 
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | exitcode: 0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | exitmsg: OK
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | cpuconsumptiontime: 26206 s
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | nevents: 400
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | neventsw: 0
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | pid: 2186831
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | pgrp: 2186831
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | corecount: 6
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | event service: False
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | sizes: {0: 2393740, 3: 2393946, 11: 2393974, 5212: 2420237, 5213: 2429236, 5291: 2429350}
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | --------------------------------------------------
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | 
[2025-05-25 08:13:10] 2025-05-24 23:12:55,551 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-05-25 08:13:10] 2025-05-24 23:12:55,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | job 6665376035 has completed (purged errors)
[2025-05-25 08:13:10] 2025-05-24 23:12:55,561 | INFO     | overall cleanup function is called
[2025-05-25 08:13:10] 2025-05-24 23:12:56,566 | INFO     | --- collectZombieJob: --- 10, [2186831]
[2025-05-25 08:13:10] 2025-05-24 23:12:56,566 | INFO     | zombie collector waiting for pid 2186831
[2025-05-25 08:13:10] 2025-05-24 23:12:56,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 08:13:10] 2025-05-24 23:12:56,566 | INFO     | collected zombie processes
[2025-05-25 08:13:10] 2025-05-24 23:12:56,566 | INFO     | will attempt to kill all subprocesses of pid=2186831
[2025-05-25 08:13:10] 2025-05-24 23:12:56,599 | INFO     | process IDs to be killed: [2186831] (in reverse order)
[2025-05-25 08:13:10] 2025-05-24 23:12:56,618 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 08:13:10] 2025-05-24 23:12:56,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 08:13:10] 2025-05-24 23:12:56,620 | INFO     | did not find any defunct processes belonging to 2186831
[2025-05-25 08:13:10] 2025-05-24 23:12:56,621 | INFO     | did not find any defunct processes belonging to 2186831
[2025-05-25 08:13:10] 2025-05-24 23:12:56,621 | INFO     | ready for new job
[2025-05-25 08:13:10] 2025-05-24 23:12:56,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 08:13:10] 2025-05-24 23:12:56,622 | INFO     | **************************************
[2025-05-25 08:13:10] 2025-05-24 23:12:56,622 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 08:13:10] 2025-05-24 23:12:56,622 | INFO     | **************************************
[2025-05-25 08:13:10] 2025-05-24 23:12:56,622 | INFO     | 
[2025-05-25 08:13:10] 2025-05-24 23:12:56,623 | INFO     | architecture information:
[2025-05-25 08:13:10] 2025-05-24 23:12:56,623 | INFO     | executing command: cat /etc/os-release
[2025-05-25 08:13:10] 2025-05-24 23:12:56,629 | INFO     | cat /etc/os-release:
[2025-05-25 08:13:10] NAME="CentOS Linux"
[2025-05-25 08:13:10] VERSION="7 (Core)"
[2025-05-25 08:13:10] ID="centos"
[2025-05-25 08:13:10] ID_LIKE="rhel fedora"
[2025-05-25 08:13:10] VERSION_ID="7"
[2025-05-25 08:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 08:13:10] ANSI_COLOR="0;31"
[2025-05-25 08:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 08:13:10] HOME_URL="https://www.centos.org/"
[2025-05-25 08:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 08:13:10] 
[2025-05-25 08:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 08:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 08:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 08:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 08:13:10] 
[2025-05-25 08:13:10] 2025-05-24 23:12:56,629 | INFO     | **************************************
[2025-05-25 08:13:10] 2025-05-24 23:12:57,132 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | INFO     | sufficient remaining disk space (282904756224 B)
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | INFO     | update_server=False
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:13:10] 2025-05-24 23:12:57,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 08:13:10] 2025-05-24 23:12:57,140 | INFO     | aborting loop
[2025-05-25 08:13:10] 2025-05-24 23:12:57,661 | INFO     | all data control threads have been joined
[2025-05-25 08:13:10] 2025-05-24 23:12:57,697 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 08:13:10] 2025-05-24 23:12:57,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 08:13:10] 2025-05-24 23:12:57,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 08:13:10] 2025-05-24 23:12:57,859 | INFO     | all payload control threads have been joined
[2025-05-25 08:13:10] 2025-05-24 23:12:57,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 08:13:10] 2025-05-24 23:12:58,144 | INFO     | [job] retrieve thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,145 | INFO     | [job] queue monitor thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,145 | INFO     | [job] job monitor thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,223 | INFO     | all job control threads have been joined
[2025-05-25 08:13:10] 2025-05-24 23:12:58,261 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,292 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,666 | INFO     | [data] control thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,811 | INFO     | [payload] failed_post thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:58,864 | INFO     | [payload] control thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,089 | INFO     | [job] validate thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,095 | INFO     | [data] copytool_in thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,228 | INFO     | [job] control thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,378 | INFO     | [payload] validate_post thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,612 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:12:59,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 08:13:10] 2025-05-24 23:12:59,979 | INFO     | [data] copytool_out thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:13:03,983 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 08:13:10] 2025-05-24 23:13:05,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574415406912)>', '<ExcThread(monitor, started 140573910480640)>']
[2025-05-25 08:13:10] 2025-05-24 23:13:05,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 08:13:10] 2025-05-24 23:13:05,733 | INFO     | [monitor] control thread has ended
[2025-05-25 08:13:10] 2025-05-24 23:13:10,679 | INFO     | all workflow threads have been joined
[2025-05-25 08:13:10] 2025-05-24 23:13:10,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 08:13:10] 2025-05-24 23:13:10,679 | INFO     | traces error code: 0
[2025-05-25 08:13:10] 2025-05-24 23:13:10,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 08:13:10] 2025-05-24 23:13:10,735 [wrapper] ==== pilot stdout END ====
[2025-05-25 08:13:10] 2025-05-24 23:13:10,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 08:13:10] 2025-05-24 23:13:10,737 [wrapper] pilotpid: 2180297
[2025-05-25 08:13:10] 2025-05-24 23:13:10,738 [wrapper] Pilot exit status: 0
[2025-05-25 08:13:10] 2025-05-24 23:13:10,742 [wrapper] pandaids: 6665376035
[2025-05-25 08:13:10] 2025-05-24 23:13:10,753 [wrapper] cleanup supervisor_pilot 2245204 2180298
[2025-05-25 08:13:10] 2025-05-24 23:13:10,754 [wrapper] Test setup, not cleaning
[2025-05-25 08:13:10] 2025-05-24 23:13:10,755 [wrapper] apfmon messages muted
[2025-05-25 08:13:10] 2025-05-24 23:13:10,756 [wrapper] ==== wrapper stdout END ====
[2025-05-25 08:13:10] 2025-05-24 23:13:10,757 [wrapper] ==== wrapper stderr END ====
[2025-05-25 08:13:10]  *** Error codes and diagnostics ***
[2025-05-25 08:13:10]     "exeErrorCode": 0,
[2025-05-25 08:13:10]     "exeErrorDiag": "",
[2025-05-25 08:13:10]     "pilotErrorCode": 0,
[2025-05-25 08:13:10]     "pilotErrorDiag": "",
[2025-05-25 08:13:10]  *** Listing of results directory ***
[2025-05-25 08:13:10] total 414968
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc    495897 May 24 18:11 pilot3.tar.gz
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc      5111 May 24 18:17 queuedata.json
[2025-05-25 08:13:10] -rwx------. 1 boinc boinc     37140 May 24 18:18 runpilot2-wrapper.sh
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc       100 May 25 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 08:13:10] -rwxr-xr-x. 1 boinc boinc      7986 May 25 06:44 run_atlas
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc       105 May 25 06:44 job.xml
[2025-05-25 08:13:10] -rw-r--r--. 2 boinc boinc 224676207 May 25 06:44 EVNT.44871834._000557.pool.root.1
[2025-05-25 08:13:10] -rw-r--r--. 2 boinc boinc     15093 May 25 06:44 start_atlas.sh
[2025-05-25 08:13:10] drwxrwx--x. 2 boinc boinc        68 May 25 06:44 shared
[2025-05-25 08:13:10] -rw-r--r--. 2 boinc boinc    508879 May 25 06:44 input.tar.gz
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc         0 May 25 06:44 boinc_lockfile
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc      2558 May 25 06:44 pandaJob.out
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc    990803 May 25 06:44 agis_schedconf.cvmfs.json
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc   1596740 May 25 06:44 agis_ddmendpoints.agis.ALL.json
[2025-05-25 08:13:10] drwx------. 4 boinc boinc      4096 May 25 06:44 pilot3
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc      9517 May 25 07:29 init_data.xml
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc 194832991 May 25 08:10 HITS.44871837._013920.pool.root.1
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc       529 May 25 08:11 boinc_task_state.xml
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc      1020 May 25 08:11 memory_monitor_summary.json
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc    281709 May 25 08:11 log.44871837._013920.job.log.tgz.1
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc        95 May 25 08:12 pilot_heartbeat.json
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc      7668 May 25 08:12 heartbeat.json
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc        27 May 25 08:12 wrapper_checkpoint.txt
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc      8192 May 25 08:12 boinc_mmap_file
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc      4355 May 25 08:13 pilotlog.txt
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc    516264 May 25 08:13 log.44871837._013920.job.log.1
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc       357 May 25 08:13 output.list
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc       620 May 25 08:13 runtime_log
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc    819200 May 25 08:13 result.tar.gz
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc      8631 May 25 08:13 runtime_log.err
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc       641 May 25 08:13 HLxMDmKC0c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmetQKDmEtJqXn.diag
[2025-05-25 08:13:10] -rw-r--r--. 1 boinc boinc     22067 May 25 08:13 stderr.txt
[2025-05-25 08:13:10] HITS file was successfully produced:
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc 194832991 May 25 08:10 shared/HITS.pool.root.1
[2025-05-25 08:13:10]  *** Contents of shared directory: ***
[2025-05-25 08:13:10] total 410996
[2025-05-25 08:13:10] -rw-r--r--. 2 boinc boinc 224676207 May 25 06:44 ATLAS.root_0
[2025-05-25 08:13:10] -rw-r--r--. 2 boinc boinc     15093 May 25 06:44 start_atlas.sh
[2025-05-25 08:13:10] -rw-r--r--. 2 boinc boinc    508879 May 25 06:44 input.tar.gz
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc 194832991 May 25 08:10 HITS.pool.root.1
[2025-05-25 08:13:10] -rw-------. 1 boinc boinc    819200 May 25 08:13 result.tar.gz
08:13:12 (2176597): run_atlas exited; CPU time 26243.651674
08:13:12 (2176597): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN