Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-24 19:16:45 (1162358): Detected: vboxwrapper 26206
2025-05-24 19:16:45 (1162358): Detected: BOINC client v8.2.2
2025-05-24 19:16:45 (1162358): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-05-24 19:16:45 (1162358): Successfully copied 'init_data.xml' to the shared directory.
2025-05-24 19:16:46 (1162358): Create VM. (boinc_18dd3ec26b8ef5b5, slot#15)
2025-05-24 19:16:46 (1162358): Setting Memory Size for VM. (4096MB)
2025-05-24 19:16:46 (1162358): Setting CPU Count for VM. (1)
2025-05-24 19:16:46 (1162358): Setting Chipset Options for VM.
2025-05-24 19:16:46 (1162358): Setting Graphics Controller Options for VM.
2025-05-24 19:16:46 (1162358): Setting Boot Options for VM.
2025-05-24 19:16:46 (1162358): Setting Network Configuration for NAT.
2025-05-24 19:16:46 (1162358): Enabling VM Network Access.
2025-05-24 19:16:46 (1162358): Disabling USB Support for VM.
2025-05-24 19:16:46 (1162358): Disabling COM Port Support for VM.
2025-05-24 19:16:47 (1162358): Disabling LPT Port Support for VM.
2025-05-24 19:16:47 (1162358): Disabling Audio Support for VM.
2025-05-24 19:16:47 (1162358): Disabling Clipboard Support for VM.
2025-05-24 19:16:47 (1162358): Disabling Drag and Drop Support for VM.
2025-05-24 19:16:47 (1162358): Adding storage controller(s) to VM.
2025-05-24 19:16:47 (1162358): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-24 19:16:47 (1162358): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-24 19:16:47 (1162358): forwarding host port 44599 to guest port 80
2025-05-24 19:16:47 (1162358): Enabling remote desktop for VM.
2025-05-24 19:16:48 (1162358): Enabling shared directory for VM.
2025-05-24 19:16:48 (1162358): Starting VM using VBoxManage interface. (boinc_18dd3ec26b8ef5b5, slot#15)
2025-05-24 19:16:49 (1162358): Successfully started VM. (PID = '1162746')
2025-05-24 19:16:49 (1162358): Reporting VM Process ID to BOINC.
2025-05-24 19:16:49 (1162358): Guest Log: BIOS: VirtualBox 7.0.20
2025-05-24 19:16:49 (1162358): Guest Log: CPUID EDX: 0x178bfbff
2025-05-24 19:16:49 (1162358): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-24 19:16:49 (1162358): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-24 19:16:49 (1162358): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-24 19:16:49 (1162358): Detected: Web Application Enabled (http://localhost:44599)
2025-05-24 19:16:49 (1162358): Detected: Remote Desktop Enabled (localhost:52251)
2025-05-24 19:16:49 (1162358): Preference change detected
2025-05-24 19:16:49 (1162358): Setting CPU throttle for VM. (100%)
2025-05-24 19:16:49 (1162358): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-24 19:16:51 (1162358): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-24 19:16:51 (1162358): Guest Log: BIOS: Booting from Hard Disk...
2025-05-24 19:16:54 (1162358): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-24 19:16:54 (1162358): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-24 19:16:54 (1162358): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-24 19:17:00 (1162358): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-24 19:17:00 (1162358): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-24 19:17:13 (1162358): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000243 main     Log opened 2025-05-24T17:17:11.654773000Z
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000464 main     OS Product: Linux
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000546 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000612 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000677 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000679 main     Process ID: 1237
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.000679 main     Package type: LINUX_64BITS_GENERIC
2025-05-24 19:17:13 (1162358): Guest Log: 00:00:00.003180 main     5.2.32 r132073 started. Verbose level = 0
2025-05-24 19:17:13 (1162358): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-24 19:17:13 (1162358): Guest Log: [INFO] Mounting shared directory
2025-05-24 19:17:13 (1162358): Guest Log: [INFO] Checking for init_data.xml
2025-05-24 19:17:21 (1162358): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-24 19:17:21 (1162358): Guest Log: [INFO] Detected branch: prod
2025-05-24 19:17:21 (1162358): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-24 19:17:21 (1162358): Guest Log: Copying input files
2025-05-24 19:17:23 (1162358): Guest Log: Copied input files into RunAtlas.
2025-05-24 19:17:23 (1162358): Guest Log: Detected user-configured HTTP proxy at http://localhost:3128 - will set in /etc/cvmfs/default.local
2025-05-24 19:17:46 (1162358): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-24 19:17:46 (1162358): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-24 19:17:46 (1162358): Guest Log: 2.6.3.0 1510 0 29524 146374 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-05-24 19:17:47 (1162358): Guest Log: copied the webapp to /var/www
2025-05-24 19:17:47 (1162358): Guest Log: core_number=1
2025-05-24 19:17:47 (1162358): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-24 19:17:47 (1162358): Guest Log:  *** Starting ATLAS job. (PandaID=6665439810 taskID=44871837) ***
2025-05-24 20:55:50 (1162358): Status Report: Elapsed Time: '6000.000000'
2025-05-24 20:55:50 (1162358): Status Report: CPU Time: '5778.630000'
2025-05-24 22:34:50 (1162358): Status Report: Elapsed Time: '12000.000000'
2025-05-24 22:34:50 (1162358): Status Report: CPU Time: '11727.520000'
2025-05-25 00:13:51 (1162358): Status Report: Elapsed Time: '18000.000000'
2025-05-25 00:13:51 (1162358): Status Report: CPU Time: '17677.960000'
2025-05-25 01:52:51 (1162358): Status Report: Elapsed Time: '24000.000000'
2025-05-25 01:52:51 (1162358): Status Report: CPU Time: '23626.740000'
2025-05-25 03:31:52 (1162358): Status Report: Elapsed Time: '30000.000000'
2025-05-25 03:31:52 (1162358): Status Report: CPU Time: '29575.700000'
2025-05-25 05:10:53 (1162358): Status Report: Elapsed Time: '36000.000000'
2025-05-25 05:10:53 (1162358): Status Report: CPU Time: '35524.650000'
2025-05-25 06:49:53 (1162358): Status Report: Elapsed Time: '42000.000000'
2025-05-25 06:49:53 (1162358): Status Report: CPU Time: '41475.060000'
2025-05-25 07:37:08 (1162358): Guest Log:  *** Job finished ***
2025-05-25 07:37:08 (1162358): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:36:54,433 | INFO     | [data] queue_monitor thread has finished
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:00,956 | INFO     | job.realtimelogging is not enabled
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:01,958 | INFO     | [payload] run_realtimelog thread has finished
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:02,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245240198976)>', '<ExcThread(monitor, started 140244926043904)>']
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:02,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:02,986 | INFO     | [monitor] control thread has ended
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,831 | INFO     | all workflow threads have been joined
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,831 | INFO     | end of generic workflow (traces error code: 0)
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,831 | INFO     | traces error code: 0
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,952 [wrapper] ==== pilot stdout END ====
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,957 [wrapper] ==== wrapper stdout RESUME ====
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,961 [wrapper] pilotpid: 5783
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:07,966 [wrapper] Pilot exit status: 0
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:08,032 [wrapper] pandaids: 6665439810
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:08,068 [wrapper] cleanup supervisor_pilot 29996 5784
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:08,074 [wrapper] Test setup, not cleaning
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:08,079 [wrapper] apfmon messages muted
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:08,084 [wrapper] ==== wrapper stdout END ====
2025-05-25 07:37:08 (1162358): Guest Log: 2025-05-25 05:37:08,089 [wrapper] ==== wrapper stderr END ====
2025-05-25 07:37:08 (1162358): Guest Log:  *** Error codes and diagnostics ***
2025-05-25 07:37:08 (1162358): Guest Log:     "exeErrorCode": 0,
2025-05-25 07:37:08 (1162358): Guest Log:     "exeErrorDiag": "",
2025-05-25 07:37:08 (1162358): Guest Log:     "pilotErrorCode": 0,
2025-05-25 07:37:08 (1162358): Guest Log:     "pilotErrorDiag": "",
2025-05-25 07:37:08 (1162358): Guest Log:  *** Listing of results directory ***
2025-05-25 07:37:08 (1162358): Guest Log: total 203848
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 24 12:04 pilot3.tar.gz
2025-05-25 07:37:08 (1162358): Guest Log: -rwx------. 1 atlas atlas     37140 May 24 12:07 runpilot2-wrapper.sh
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 24 12:07 queuedata.json
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas      9818 May 24 17:17 init_data.xml
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas    508878 May 24 17:17 input.tar.gz
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas     15093 May 24 17:17 start_atlas.sh
2025-05-25 07:37:08 (1162358): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 24 17:17 EVNT.44871834._000679.pool.root.1 -> /data/./ATLAS.root_0
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas      2558 May 24 17:17 pandaJob.out
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas    988572 May 24 17:19 agis_schedconf.cvmfs.json
2025-05-25 07:37:08 (1162358): Guest Log: drwx------. 4 atlas atlas      4096 May 24 17:19 pilot3
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas 196368707 May 25 05:35 HITS.44871837._016969.pool.root.1
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas      1022 May 25 05:36 memory_monitor_summary.json
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas   1596740 May 25 05:36 agis_ddmendpoints.agis.ALL.json
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas    536033 May 25 05:36 log.44871837._016969.job.log.tgz.1
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas        95 May 25 05:36 pilot_heartbeat.json
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas      7705 May 25 05:36 heartbeat.json
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas      4671 May 25 05:37 pilotlog.txt
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas   3770337 May 25 05:37 log.44871837._016969.job.log.1
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas       357 May 25 05:37 output.list
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 25 05:37 runtime_log
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas   4321280 May 25 05:37 result.tar.gz
2025-05-25 07:37:08 (1162358): Guest Log: -rw-------. 1 atlas atlas       657 May 25 05:37 UMqMDmNq2c7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxiMKDmaM494m.diag
2025-05-25 07:37:08 (1162358): Guest Log: -rw-r--r--. 1 atlas atlas      8472 May 25 05:37 runtime_log.err
2025-05-25 07:37:08 (1162358): Guest Log: Looking for outputfile HITS.44871837._016969.pool.root.1
2025-05-25 07:37:09 (1162358): Guest Log: HITS file was successfully produced
2025-05-25 07:37:09 (1162358): Guest Log: -rw-------. 1 atlas atlas 196368707 May 25 05:35 /home/atlas/RunAtlas/HITS.44871837._016969.pool.root.1
2025-05-25 07:37:09 (1162358): Guest Log: Successfully finished the ATLAS job!
2025-05-25 07:37:09 (1162358): Guest Log: Copying the results back to the shared directory!
2025-05-25 07:37:09 (1162358): Guest Log:  *** Contents of shared directory: ***
2025-05-25 07:37:09 (1162358): Guest Log: total 221200
2025-05-25 07:37:09 (1162358): Guest Log: -rw-r--r--. 1 root root 221640103 May 24 17:16 ATLAS.root_0
2025-05-25 07:37:09 (1162358): Guest Log: -rw-r--r--. 1 root root      9818 May 24 17:16 init_data.xml
2025-05-25 07:37:09 (1162358): Guest Log: -rw-r--r--. 1 root root    508878 May 24 17:16 input.tar.gz
2025-05-25 07:37:09 (1162358): Guest Log: -rw-r--r--. 1 root root   4321280 May 25 05:37 result.tar.gz
2025-05-25 07:37:09 (1162358): Guest Log: -rw-r--r--. 1 root root     15093 May 24 17:16 start_atlas.sh
2025-05-25 07:37:09 (1162358): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-25 07:37:09 (1162358): VM Completion File Detected.
2025-05-25 07:37:09 (1162358): Powering off VM.
2025-05-25 07:37:10 (1162358): Successfully stopped VM.
2025-05-25 07:37:10 (1162358): Deregistering VM. (boinc_18dd3ec26b8ef5b5, slot#15)
2025-05-25 07:37:10 (1162358): Removing network bandwidth throttle group from VM.
2025-05-25 07:37:10 (1162358): Removing VM from VirtualBox.
07:37:15 (1162358): called boinc_finish(0)

</stderr_txt>
]]>

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