Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:42 (275431): wrapper (7.7.26015): starting
12:58:42 (275431): wrapper: running run_atlas (--nthreads 8)
[2025-05-24 12:58:42] Arguments: --nthreads 8
[2025-05-24 12:58:42] Threads: 8
[2025-05-24 12:58:42] Checking for CVMFS
[2025-05-24 12:58:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-24 12:58:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-24 12:58:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-24 12:58:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-24 12:58:44] 2.11.2.0 7082 13213 144896 146373 2 368 12884109 18432000 22048 130560 0 47814659 99.320 66697409 37162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-24 12:58:44] CVMFS is ok
[2025-05-24 12:58:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-24 12:58:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-24 12:58:44] Further information can be found at the LHC@home message board.
[2025-05-24 12:58:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-24 12:58:44] Checking for apptainer binary...
[2025-05-24 12:58:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-24 12:58:44] Running /usr/bin/apptainer --version
[2025-05-24 12:58:44] apptainer version 1.3.2-1.el7
[2025-05-24 12:58:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-24 12:59:08] c-211-35-3.aglt2.org
[2025-05-24 12:59:08] apptainer works
[2025-05-24 12:59:08] Set ATHENA_PROC_NUMBER=8
[2025-05-24 12:59:08] Set ATHENA_CORE_NUMBER=8
[2025-05-24 12:59:08] Starting ATLAS job with PandaID=6665382985
[2025-05-24 12:59:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-24 19:31:15]  *** The last 200 lines of the pilot log: ***
[2025-05-24 19:31:15] 2025-05-24 23:30:50,050 | INFO     | extracted standard memory fields from prmon json
[2025-05-24 19:31:15] 2025-05-24 23:30:50,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-24 19:31:15] 2025-05-24 23:30:50,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-24 19:31:15] 2025-05-24 23:30:50,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-24 19:31:15] 2025-05-24 23:30:50,126 | INFO     | fitting pss+swap vs Time
[2025-05-24 19:31:15] 2025-05-24 23:30:50,127 | INFO     | sum of square deviations: 16747533028.71163
[2025-05-24 19:31:15] 2025-05-24 23:30:50,179 | INFO     | sum of deviations: 198901008642.62164
[2025-05-24 19:31:15] 2025-05-24 23:30:50,179 | INFO     | mean x: 1748117863.716931
[2025-05-24 19:31:15] 2025-05-24 23:30:50,180 | INFO     | mean y: 2423970.9497354496
[2025-05-24 19:31:15] 2025-05-24 23:30:50,180 | INFO     | -- intersect: -20758986424.443344
[2025-05-24 19:31:15] 2025-05-24 23:30:50,195 | INFO     | intersect: -20758986424.443344
[2025-05-24 19:31:15] 2025-05-24 23:30:50,196 | INFO     | chi2: 7.593109472950142
[2025-05-24 19:31:15] 2025-05-24 23:30:50,196 | INFO     | sum of square deviations: 16091722485.973131
[2025-05-24 19:31:15] 2025-05-24 23:30:50,243 | INFO     | sum of deviations: 245744089104.93542
[2025-05-24 19:31:15] 2025-05-24 23:30:50,267 | INFO     | mean x: 1748117711.219839
[2025-05-24 19:31:15] 2025-05-24 23:30:50,267 | INFO     | mean y: 2434769.927613941
[2025-05-24 19:31:15] 2025-05-24 23:30:50,267 | INFO     | -- intersect: -26693874153.271225
[2025-05-24 19:31:15] 2025-05-24 23:30:50,267 | INFO     | intersect: -26693874153.271225
[2025-05-24 19:31:15] 2025-05-24 23:30:50,268 | INFO     | chi2: 6.079055496315671
[2025-05-24 19:31:15] 2025-05-24 23:30:50,268 | INFO     | current chi2=6.079055496315671 (change=19.939841273567442 %)
[2025-05-24 19:31:15] 2025-05-24 23:30:50,268 | INFO     | right removable region: 372
[2025-05-24 19:31:15] 2025-05-24 23:30:50,269 | INFO     | sum of square deviations: 16091672465.973131
[2025-05-24 19:31:15] 2025-05-24 23:30:50,328 | INFO     | sum of deviations: 68707241977.828445
[2025-05-24 19:31:15] 2025-05-24 23:30:50,328 | INFO     | mean x: 1748118016.219839
[2025-05-24 19:31:15] 2025-05-24 23:30:50,329 | INFO     | mean y: 2454230.8069705092
[2025-05-24 19:31:15] 2025-05-24 23:30:50,365 | INFO     | -- intersect: -7461553491.211653
[2025-05-24 19:31:15] 2025-05-24 23:30:50,365 | INFO     | intersect: -7461553491.211653
[2025-05-24 19:31:15] 2025-05-24 23:30:50,366 | INFO     | chi2: 3.005738221146864
[2025-05-24 19:31:15] 2025-05-24 23:30:50,366 | INFO     | current chi2=3.005738221146864 (change=60.41492313716046 %)
[2025-05-24 19:31:15] 2025-05-24 23:30:50,366 | INFO     | sum of square deviations: 15453183696.171272
[2025-05-24 19:31:15] 2025-05-24 23:30:50,458 | INFO     | sum of deviations: 2546664700.540764
[2025-05-24 19:31:15] 2025-05-24 23:30:50,459 | INFO     | mean x: 1748118168.7201087
[2025-05-24 19:31:15] 2025-05-24 23:30:50,459 | INFO     | mean y: 2469988.4809782607
[2025-05-24 19:31:15] 2025-05-24 23:30:50,459 | INFO     | -- intersect: -285617626.35508126
[2025-05-24 19:31:15] 2025-05-24 23:30:50,459 | INFO     | intersect: -285617626.35508126
[2025-05-24 19:31:15] 2025-05-24 23:30:50,493 | INFO     | chi2: 1.7366455827308702
[2025-05-24 19:31:15] 2025-05-24 23:30:50,493 | INFO     | current chi2=1.7366455827308702 (change=42.2223275961724 %)
[2025-05-24 19:31:15] 2025-05-24 23:30:50,494 | INFO     | sum of square deviations: 14831789200.925589
[2025-05-24 19:31:15] 2025-05-24 23:30:50,570 | INFO     | sum of deviations: -18059944253.570236
[2025-05-24 19:31:15] 2025-05-24 23:30:50,570 | INFO     | mean x: 1748118321.2231405
[2025-05-24 19:31:15] 2025-05-24 23:30:50,570 | INFO     | mean y: 2475038.7107438017
[2025-05-24 19:31:15] 2025-05-24 23:30:50,570 | INFO     | -- intersect: 2131073214.0384042
[2025-05-24 19:31:15] 2025-05-24 23:30:50,570 | INFO     | intersect: 2131073214.0384042
[2025-05-24 19:31:15] 2025-05-24 23:30:50,606 | INFO     | chi2: 1.6282115828426034
[2025-05-24 19:31:15] 2025-05-24 23:30:50,607 | INFO     | current chi2=1.6282115828426034 (change=6.24387618098534 %)
[2025-05-24 19:31:15] 2025-05-24 23:30:50,607 | INFO     | left removable region: 30
[2025-05-24 19:31:15] 2025-05-24 23:30:50,607 | INFO     | sum of square deviations: 12403700211.25144
[2025-05-24 19:31:15] 2025-05-24 23:30:50,617 | INFO     | sum of deviations: 16766684270.485382
[2025-05-24 19:31:15] 2025-05-24 23:30:50,618 | INFO     | mean x: 1748118595.7309942
[2025-05-24 19:31:15] 2025-05-24 23:30:50,618 | INFO     | mean y: 2490348.1900584796
[2025-05-24 19:31:15] 2025-05-24 23:30:50,618 | INFO     | -- intersect: -2360526498.6213884
[2025-05-24 19:31:15] 2025-05-24 23:30:50,618 | INFO     | intersect: -2360526498.6213884
[2025-05-24 19:31:15] 2025-05-24 23:30:50,618 | INFO     | chi2: 0.000983679610563956
[2025-05-24 19:31:15] 2025-05-24 23:30:50,619 | INFO     | -- intersect: -2360526498.6213884
[2025-05-24 19:31:15] 2025-05-24 23:30:50,633 | INFO     | current memory leak: 1.35 B/s (using 342 data points, chi2=0.00)
[2025-05-24 19:31:15] 2025-05-24 23:30:50,634 | INFO     | ..............................
[2025-05-24 19:31:15] 2025-05-24 23:30:50,634 | INFO     | . Timing measurements:
[2025-05-24 19:31:15] 2025-05-24 23:30:50,634 | INFO     | . get job = 0 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,634 | INFO     | . initial setup = 9 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,634 | INFO     | . payload setup = 120 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,634 | INFO     | . stage-in = 0 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,635 | INFO     | . payload execution = 23086 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,635 | INFO     | . stage-out = 6 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,641 | INFO     | . log creation = 1 s
[2025-05-24 19:31:15] 2025-05-24 23:30:50,641 | INFO     | ..............................
[2025-05-24 19:31:15] 2025-05-24 23:30:51,254 | INFO     | 
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | job summary report
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | --------------------------------------------------
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | PanDA job id: 6665382985
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | task id: 44871837
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | errors: (none)
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | pilot state: finished 
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | transexitcode: 0
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | exeerrorcode: 0
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | exeerrordiag: 
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | exitcode: 0
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | exitmsg: OK
[2025-05-24 19:31:15] 2025-05-24 23:30:51,255 | INFO     | cpuconsumptiontime: 56788 s
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | nevents: 400
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | neventsw: 0
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | pid: 307325
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | pgrp: 307325
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | corecount: 8
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | event service: False
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | sizes: {0: 2392911, 1: 2393596, 2: 2393795, 13: 2393795, 24: 2393851, 35: 2393879, 46: 2394035, 55: 2394269, 57: 2394297, 23211: 2428697, 23212: 2428696, 23220: 24
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | --------------------------------------------------
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | 
[2025-05-24 19:31:15] 2025-05-24 23:30:51,256 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-05-24 19:31:15] 2025-05-24 23:30:51,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | job 6665382985 has completed (purged errors)
[2025-05-24 19:31:15] 2025-05-24 23:30:51,518 | INFO     | overall cleanup function is called
[2025-05-24 19:31:15] 2025-05-24 23:30:52,544 | INFO     | --- collectZombieJob: --- 10, [307325]
[2025-05-24 19:31:15] 2025-05-24 23:30:52,544 | INFO     | zombie collector waiting for pid 307325
[2025-05-24 19:31:15] 2025-05-24 23:30:52,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-24 19:31:15] 2025-05-24 23:30:52,545 | INFO     | collected zombie processes
[2025-05-24 19:31:15] 2025-05-24 23:30:52,545 | INFO     | will attempt to kill all subprocesses of pid=307325
[2025-05-24 19:31:15] 2025-05-24 23:30:57,156 | INFO     | process IDs to be killed: [307325] (in reverse order)
[2025-05-24 19:31:15] 2025-05-24 23:30:58,414 | INFO     | PID=284651 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-24 19:31:15] 2025-05-24 23:30:58,415 | INFO     | .. there are 18 such processes running
[2025-05-24 19:31:15] 2025-05-24 23:30:58,513 | WARNING  | found no corresponding commands to process id(s)
[2025-05-24 19:31:15] 2025-05-24 23:30:58,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-24 19:31:15] 2025-05-24 23:30:58,576 | INFO     | did not find any defunct processes belonging to 307325
[2025-05-24 19:31:15] 2025-05-24 23:30:58,627 | INFO     | did not find any defunct processes belonging to 307325
[2025-05-24 19:31:15] 2025-05-24 23:30:58,627 | INFO     | ready for new job
[2025-05-24 19:31:15] 2025-05-24 23:30:58,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-24 19:31:15] 2025-05-24 23:30:58,646 | INFO     | **************************************
[2025-05-24 19:31:15] 2025-05-24 23:30:58,646 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-24 19:31:15] 2025-05-24 23:30:58,646 | INFO     | **************************************
[2025-05-24 19:31:15] 2025-05-24 23:30:58,646 | INFO     | 
[2025-05-24 19:31:15] 2025-05-24 23:30:58,683 | INFO     | architecture information:
[2025-05-24 19:31:15] 2025-05-24 23:30:58,701 | INFO     | executing command: cat /etc/os-release
[2025-05-24 19:31:15] 2025-05-24 23:30:58,923 | INFO     | cat /etc/os-release:
[2025-05-24 19:31:15] NAME="CentOS Linux"
[2025-05-24 19:31:15] VERSION="7 (Core)"
[2025-05-24 19:31:15] ID="centos"
[2025-05-24 19:31:15] ID_LIKE="rhel fedora"
[2025-05-24 19:31:15] VERSION_ID="7"
[2025-05-24 19:31:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-24 19:31:15] ANSI_COLOR="0;31"
[2025-05-24 19:31:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-24 19:31:15] HOME_URL="https://www.centos.org/"
[2025-05-24 19:31:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-24 19:31:15] 
[2025-05-24 19:31:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-24 19:31:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-24 19:31:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-24 19:31:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-24 19:31:15] 
[2025-05-24 19:31:15] 2025-05-24 23:30:58,924 | INFO     | **************************************
[2025-05-24 19:31:15] 2025-05-24 23:30:59,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-05-24 19:31:15] 2025-05-24 23:30:59,563 | INFO     | sufficient remaining disk space (103733526528 B)
[2025-05-24 19:31:15] 2025-05-24 23:30:59,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-24 19:31:15] 2025-05-24 23:30:59,563 | INFO     | current server update state: UPDATING_FINAL
[2025-05-24 19:31:15] 2025-05-24 23:30:59,563 | INFO     | update_server=False
[2025-05-24 19:31:15] 2025-05-24 23:30:59,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-24 19:31:15] 2025-05-24 23:30:59,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:31:15] 2025-05-24 23:30:59,564 | INFO     | aborting loop
[2025-05-24 19:31:15] 2025-05-24 23:30:59,997 | INFO     | all job control threads have been joined
[2025-05-24 19:31:15] 2025-05-24 23:31:00,231 | INFO     | all data control threads have been joined
[2025-05-24 19:31:15] 2025-05-24 23:31:00,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-24 19:31:15] 2025-05-24 23:31:00,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-24 19:31:15] 2025-05-24 23:31:00,436 | INFO     | found 0 job(s) in 20 queues
[2025-05-24 19:31:15] 2025-05-24 23:31:00,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-24 19:31:15] 2025-05-24 23:31:00,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-24 19:31:15] 2025-05-24 23:31:00,523 | INFO     | all payload control threads have been joined
[2025-05-24 19:31:15] 2025-05-24 23:31:00,571 | INFO     | [job] retrieve thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:00,572 | INFO     | [job] job monitor thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:00,766 | INFO     | [payload] failed_post thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:00,857 | INFO     | [payload] validate_pre thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:00,920 | INFO     | [job] validate thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:00,923 | INFO     | [payload] execute_payloads thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:00,924 | INFO     | [job] create_data_payload thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,003 | INFO     | [job] control thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,237 | INFO     | [data] control thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,252 [wrapper] supervise_pilot (15 min periods counter: 27)
[2025-05-24 19:31:15] 2025-05-24 23:31:01,417 | INFO     | [job] queue monitor thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,529 | INFO     | [payload] control thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,756 | INFO     | [payload] validate_post thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,921 | INFO     | [data] copytool_in thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:01,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-24 19:31:15] 2025-05-24 23:31:02,341 | INFO     | [data] copytool_out thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:05,939 | INFO     | [data] queue_monitor thread has finished
[2025-05-24 19:31:15] 2025-05-24 23:31:06,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524492506944)>', '<ExcThread(monitor, started 140524056987392)>']
[2025-05-24 19:31:15] 2025-05-24 23:31:07,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-24 19:31:15] 2025-05-24 23:31:07,487 | INFO     | [monitor] control thread has ended
[2025-05-24 19:31:15] 2025-05-24 23:31:11,607 | INFO     | all workflow threads have been joined
[2025-05-24 19:31:15] 2025-05-24 23:31:11,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-24 19:31:15] 2025-05-24 23:31:11,607 | INFO     | traces error code: 0
[2025-05-24 19:31:15] 2025-05-24 23:31:11,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-24 19:31:15] 2025-05-24 23:31:12,737 [wrapper] ==== pilot stdout END ====
[2025-05-24 19:31:15] 2025-05-24 23:31:12,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-24 19:31:15] 2025-05-24 23:31:12,845 [wrapper] pilotpid: 284651
[2025-05-24 19:31:15] 2025-05-24 23:31:12,870 [wrapper] Pilot exit status: 0
[2025-05-24 19:31:15] 2025-05-24 23:31:13,023 [wrapper] pandaids: 6665382985
[2025-05-24 19:31:15] 2025-05-24 23:31:13,910 [wrapper] cleanup supervisor_pilot 104270 284652
[2025-05-24 19:31:15] 2025-05-24 23:31:13,935 [wrapper] Test setup, not cleaning
[2025-05-24 19:31:15] 2025-05-24 23:31:13,979 [wrapper] apfmon messages muted
[2025-05-24 19:31:15] 2025-05-24 23:31:14,008 [wrapper] ==== wrapper stdout END ====
[2025-05-24 19:31:15] 2025-05-24 23:31:14,032 [wrapper] ==== wrapper stderr END ====
[2025-05-24 19:31:15]  *** Error codes and diagnostics ***
[2025-05-24 19:31:15]     "exeErrorCode": 0,
[2025-05-24 19:31:15]     "exeErrorDiag": "",
[2025-05-24 19:31:15]     "pilotErrorCode": 0,
[2025-05-24 19:31:15]     "pilotErrorDiag": "",
[2025-05-24 19:31:15]  *** Listing of results directory ***
[2025-05-24 19:31:15] total 415508
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas    495897 May 24 07:36 pilot3.tar.gz
[2025-05-24 19:31:15] -rwx------ 1 boincer umatlas     37140 May 24 07:48 runpilot2-wrapper.sh
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas      5111 May 24 07:48 queuedata.json
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas       100 May 24 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-24 19:31:15] -rwxr-xr-x 1 boincer umatlas      7986 May 24 12:58 run_atlas
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas       105 May 24 12:58 job.xml
[2025-05-24 19:31:15] -rw-r--r-- 2 boincer umatlas 224379767 May 24 12:58 EVNT.44871834._000667.pool.root.1
[2025-05-24 19:31:15] -rw-r--r-- 2 boincer umatlas     15093 May 24 12:58 start_atlas.sh
[2025-05-24 19:31:15] drwxrwx--x 2 boincer umatlas      4096 May 24 12:58 shared
[2025-05-24 19:31:15] -rw-r--r-- 2 boincer umatlas    508874 May 24 12:58 input.tar.gz
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas         0 May 24 12:58 boinc_lockfile
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas      2558 May 24 12:59 pandaJob.out
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas    988572 May 24 13:01 agis_schedconf.cvmfs.json
[2025-05-24 19:31:15] drwx------ 4 boincer umatlas      4096 May 24 13:01 pilot3
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas 192458215 May 24 19:27 HITS.44871837._016677.pool.root.1
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas       531 May 24 19:27 boinc_task_state.xml
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas      6300 May 24 19:28 init_data.xml
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas      1060 May 24 19:29 memory_monitor_summary.json
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas   1596740 May 24 19:29 agis_ddmendpoints.agis.ALL.json
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas    481003 May 24 19:29 log.44871837._016677.job.log.tgz.1
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas        95 May 24 19:30 pilot_heartbeat.json
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas      7752 May 24 19:30 heartbeat.json
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas      8192 May 24 19:31 boinc_mmap_file
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas        28 May 24 19:31 wrapper_checkpoint.txt
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas      4354 May 24 19:31 pilotlog.txt
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas   1923883 May 24 19:31 log.44871837._016677.job.log.1
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas       357 May 24 19:31 output.list
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas       620 May 24 19:31 runtime_log
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas   2426880 May 24 19:31 result.tar.gz
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas      8670 May 24 19:31 runtime_log.err
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas       663 May 24 19:31 NtKNDmVX2c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaKRKDmgDMU4n.diag
[2025-05-24 19:31:15] -rw-r--r-- 1 boincer umatlas     21005 May 24 19:31 stderr.txt
[2025-05-24 19:31:15] HITS file was successfully produced:
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas 192458215 May 24 19:27 shared/HITS.pool.root.1
[2025-05-24 19:31:15]  *** Contents of shared directory: ***
[2025-05-24 19:31:15] total 409964
[2025-05-24 19:31:15] -rw-r--r-- 2 boincer umatlas 224379767 May 24 12:58 ATLAS.root_0
[2025-05-24 19:31:15] -rw-r--r-- 2 boincer umatlas     15093 May 24 12:58 start_atlas.sh
[2025-05-24 19:31:15] -rw-r--r-- 2 boincer umatlas    508874 May 24 12:58 input.tar.gz
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas 192458215 May 24 19:27 HITS.pool.root.1
[2025-05-24 19:31:15] -rw------- 1 boincer umatlas   2426880 May 24 19:31 result.tar.gz
19:31:16 (275431): run_atlas exited; CPU time 57545.526275
19:31:16 (275431): called boinc_finish(0)

</stderr_txt>
]]>

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