Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:56:25 (2150104): wrapper (7.7.26015): starting
05:56:25 (2150104): wrapper: running run_atlas (--nthreads 6)
[2025-05-25 05:56:25] Arguments: --nthreads 6
[2025-05-25 05:56:25] Threads: 6
[2025-05-25 05:56:25] Checking for CVMFS
[2025-05-25 05:56:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-25 05:56:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-25 05:56:25] Running cvmfs_config stat atlas.cern.ch
[2025-05-25 05:56:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-25 05:56:26] 2.11.5.0 1578993 694 69116 146378 3 187 41425309 52428800 1858 130560 0 1572911 99.995 160390 88 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-05-25 05:56:26] CVMFS is ok
[2025-05-25 05:56:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-25 05:56:26] Checking for apptainer binary...
[2025-05-25 05:56:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-25 05:56:26] Running /usr/bin/apptainer --version
[2025-05-25 05:56:26] apptainer version 1.3.5-1.el9
[2025-05-25 05:56:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-25 05:56:26] testio008
[2025-05-25 05:56:26] apptainer works
[2025-05-25 05:56:26] Set ATHENA_PROC_NUMBER=6
[2025-05-25 05:56:26] Set ATHENA_CORE_NUMBER=6
[2025-05-25 05:56:26] Starting ATLAS job with PandaID=6665381375
[2025-05-25 05:56:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-25 07:20:24]  *** The last 200 lines of the pilot log: ***
[2025-05-25 07:20:24]  guid=f0d48b60-c507-4196-a680-3511f4822f50
[2025-05-25 07:20:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-05-25 07:20:24]  is_altstaged=None
[2025-05-25 07:20:24]  is_tar=False
[2025-05-25 07:20:24]  lfn=log.44871837._016242.job.log.tgz.1
[2025-05-25 07:20:24]  mtime=0
[2025-05-25 07:20:24]  protocol_id=None
[2025-05-25 07:20:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-25 07:20:24]  replicas=None
[2025-05-25 07:20:24]  scope=mc23_13p6TeV
[2025-05-25 07:20:24]  status=None
[2025-05-25 07:20:24]  status_code=0
[2025-05-25 07:20:24]  storage_token=
[2025-05-25 07:20:24]  surl=/var/lib/boinc/slots/16/PanDA_Pilot-6665381375/log.44871837._016242.job.log.tgz.1
[2025-05-25 07:20:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/42/log.44871837._016242.job.log.tgz.1
[2025-05-25 07:20:24]  workdir=None
[2025-05-25 07:20:24] ]
[2025-05-25 07:20:24] 2025-05-24 22:20:00,440 | INFO     | transferring file log.44871837._016242.job.log.tgz.1 from /var/lib/boinc/slots/16/PanDA_Pilot-6665381375/log.44871837._016242.job.log.tgz.1 to /var/lib/boinc/slots
[2025-05-25 07:20:24] 2025-05-24 22:20:00,440 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/16/PanDA_Pilot-6665381375/log.44871837._016242.job.log.tgz.1 /var/lib/boinc/slots/16/log.44871837._016242.j
[2025-05-25 07:20:24] 2025-05-24 22:20:00,447 | INFO     | adding to output.list: log.44871837._016242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/42/log.44871837._016242.job.log.tg
[2025-05-25 07:20:24] 2025-05-24 22:20:00,448 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-25 07:20:24] 2025-05-24 22:20:00,448 | INFO     | summary of transferred files:
[2025-05-25 07:20:24] 2025-05-24 22:20:00,448 | INFO     |  -- lfn=log.44871837._016242.job.log.tgz.1, status_code=0, status=transferred
[2025-05-25 07:20:24] 2025-05-24 22:20:00,448 | INFO     | stage-out finished correctly
[2025-05-25 07:20:24] 2025-05-24 22:20:03,743 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-25 07:20:24] 2025-05-24 22:20:03,786 | INFO     | job 6665381375 has state=finished
[2025-05-25 07:20:24] 2025-05-24 22:20:03,786 | INFO     | preparing for final server update for job 6665381375 in state='finished'
[2025-05-25 07:20:24] 2025-05-24 22:20:03,786 | INFO     | this job has now completed (state=finished)
[2025-05-25 07:20:24] 2025-05-24 22:20:03,786 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-25 07:20:24] 2025-05-24 22:20:03,787 | INFO     | log transfer has been attempted: DONE
[2025-05-25 07:20:24] 2025-05-24 22:20:03,787 | INFO     | job 6665381375 has finished - writing final server update
[2025-05-25 07:20:24] 2025-05-24 22:20:03,787 | INFO     | total number of processed events: 400 (read)
[2025-05-25 07:20:24] 2025-05-24 22:20:03,788 | INFO     | executing command: lscpu
[2025-05-25 07:20:24] 2025-05-24 22:20:03,800 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-25 07:20:24] 2025-05-24 22:20:03,862 | WARNING  | process 2160348 can no longer be monitored (due to stat problems) - aborting
[2025-05-25 07:20:24] 2025-05-24 22:20:03,862 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6665381375/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 07:20:24] 2025-05-24 22:20:03,901 | INFO     | number of running child processes to parent process 2160348: 1
[2025-05-25 07:20:24] 2025-05-24 22:20:03,901 | INFO     | maximum number of monitored processes: 6
[2025-05-25 07:20:24] 2025-05-24 22:20:05,226 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-25 07:20:24] 2025-05-24 22:20:05,226 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6665381375/memory_monitor_summary.json (trf name=prmon)
[2025-05-25 07:20:24] 2025-05-24 22:20:05,227 | INFO     | extracted standard info from prmon json
[2025-05-25 07:20:24] 2025-05-24 22:20:05,227 | INFO     | extracted standard memory fields from prmon json
[2025-05-25 07:20:24] 2025-05-24 22:20:05,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-25 07:20:24] 2025-05-24 22:20:05,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-25 07:20:24] 2025-05-24 22:20:05,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | fitting pss+swap vs Time
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | sum of square deviations: 130814524.66666663
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | sum of deviations: 14567611097.0
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | mean x: 1748122774.0666666
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | mean y: 2369228.2
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | -- intersect: -194669994466.1435
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | intersect: -194669994466.1435
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | chi2: 1.4434213581070112
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | -- intersect: -194669994466.1435
[2025-05-25 07:20:24] 2025-05-24 22:20:05,228 | INFO     | current memory leak: 111.36 B/s (using 75 data points, chi2=1.44)
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | ..............................
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . Timing measurements:
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . get job = 0 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . initial setup = 4 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . payload setup = 2 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . stage-in = 0 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . payload execution = 4985 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . stage-out = 0 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | . log creation = 0 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,229 | INFO     | ..............................
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | 
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | job summary report
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | --------------------------------------------------
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | PanDA job id: 6665381375
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | task id: 44871837
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | errors: (none)
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | pilot state: finished 
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | transexitcode: 0
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | exeerrorcode: 0
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | exeerrordiag: 
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | exitcode: 0
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | exitmsg: OK
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | cpuconsumptiontime: 25074 s
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | nevents: 400
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | neventsw: 0
[2025-05-25 07:20:24] 2025-05-24 22:20:05,274 | INFO     | pid: 2160348
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | pgrp: 2160348
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | corecount: 6
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | event service: False
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | sizes: {0: 2393518, 1: 2393717, 2: 2393923, 11: 2393951, 4991: 2420130, 4992: 2429073, 4996: 2429257, 4997: 2429427}
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | --------------------------------------------------
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | 
[2025-05-25 07:20:24] 2025-05-24 22:20:05,275 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-05-25 07:20:24] 2025-05-24 22:20:05,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | job 6665381375 has completed (purged errors)
[2025-05-25 07:20:24] 2025-05-24 22:20:05,283 | INFO     | overall cleanup function is called
[2025-05-25 07:20:24] 2025-05-24 22:20:05,327 | INFO     | PID=2153806 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-25 07:20:24] 2025-05-24 22:20:05,327 | INFO     | .. there are 3 such processes running
[2025-05-25 07:20:24] 2025-05-24 22:20:06,289 | INFO     | --- collectZombieJob: --- 10, [2160348]
[2025-05-25 07:20:24] 2025-05-24 22:20:06,289 | INFO     | zombie collector waiting for pid 2160348
[2025-05-25 07:20:24] 2025-05-24 22:20:06,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-25 07:20:24] 2025-05-24 22:20:06,289 | INFO     | collected zombie processes
[2025-05-25 07:20:24] 2025-05-24 22:20:06,289 | INFO     | will attempt to kill all subprocesses of pid=2160348
[2025-05-25 07:20:24] 2025-05-24 22:20:06,326 | INFO     | process IDs to be killed: [2160348] (in reverse order)
[2025-05-25 07:20:24] 2025-05-24 22:20:06,346 | WARNING  | found no corresponding commands to process id(s)
[2025-05-25 07:20:24] 2025-05-24 22:20:06,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-25 07:20:24] 2025-05-24 22:20:06,348 | INFO     | did not find any defunct processes belonging to 2160348
[2025-05-25 07:20:24] 2025-05-24 22:20:06,349 | INFO     | did not find any defunct processes belonging to 2160348
[2025-05-25 07:20:24] 2025-05-24 22:20:06,350 | INFO     | ready for new job
[2025-05-25 07:20:24] 2025-05-24 22:20:06,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-25 07:20:24] 2025-05-24 22:20:06,350 | INFO     | **************************************
[2025-05-25 07:20:24] 2025-05-24 22:20:06,350 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-25 07:20:24] 2025-05-24 22:20:06,350 | INFO     | **************************************
[2025-05-25 07:20:24] 2025-05-24 22:20:06,350 | INFO     | 
[2025-05-25 07:20:24] 2025-05-24 22:20:06,351 | INFO     | architecture information:
[2025-05-25 07:20:24] 2025-05-24 22:20:06,351 | INFO     | executing command: cat /etc/os-release
[2025-05-25 07:20:24] 2025-05-24 22:20:06,357 | INFO     | cat /etc/os-release:
[2025-05-25 07:20:24] NAME="CentOS Linux"
[2025-05-25 07:20:24] VERSION="7 (Core)"
[2025-05-25 07:20:24] ID="centos"
[2025-05-25 07:20:24] ID_LIKE="rhel fedora"
[2025-05-25 07:20:24] VERSION_ID="7"
[2025-05-25 07:20:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-25 07:20:24] ANSI_COLOR="0;31"
[2025-05-25 07:20:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-25 07:20:24] HOME_URL="https://www.centos.org/"
[2025-05-25 07:20:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-25 07:20:24] 
[2025-05-25 07:20:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-25 07:20:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-25 07:20:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-25 07:20:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-25 07:20:24] 
[2025-05-25 07:20:24] 2025-05-24 22:20:06,357 | INFO     | **************************************
[2025-05-25 07:20:24] 2025-05-24 22:20:06,859 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-05-25 07:20:24] 2025-05-24 22:20:06,866 | INFO     | sufficient remaining disk space (283191017472 B)
[2025-05-25 07:20:24] 2025-05-24 22:20:06,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-25 07:20:24] 2025-05-24 22:20:06,867 | INFO     | current server update state: UPDATING_FINAL
[2025-05-25 07:20:24] 2025-05-24 22:20:06,867 | INFO     | update_server=False
[2025-05-25 07:20:24] 2025-05-24 22:20:06,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-25 07:20:24] 2025-05-24 22:20:06,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-25 07:20:24] 2025-05-24 22:20:06,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:20:24] 2025-05-24 22:20:07,333 | INFO     | found 0 job(s) in 20 queues
[2025-05-25 07:20:24] 2025-05-24 22:20:07,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-25 07:20:24] 2025-05-24 22:20:07,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-25 07:20:24] 2025-05-24 22:20:07,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-25 07:20:24] 2025-05-24 22:20:07,409 | INFO     | aborting loop
[2025-05-25 07:20:24] 2025-05-24 22:20:07,498 | INFO     | all job control threads have been joined
[2025-05-25 07:20:24] 2025-05-24 22:20:07,765 | INFO     | all payload control threads have been joined
[2025-05-25 07:20:24] 2025-05-24 22:20:07,837 | INFO     | all data control threads have been joined
[2025-05-25 07:20:24] 2025-05-24 22:20:07,871 | INFO     | [job] retrieve thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:07,872 | INFO     | [job] queue monitor thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:07,980 | INFO     | [job] validate thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,000 | INFO     | [payload] execute_payloads thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,283 | INFO     | [payload] validate_pre thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,403 | INFO     | [job] create_data_payload thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,414 | INFO     | [job] job monitor thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,504 | INFO     | [job] control thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,541 | INFO     | [payload] validate_post thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,770 | INFO     | [payload] control thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,842 | INFO     | [data] control thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,872 | INFO     | [data] copytool_out thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:08,894 | INFO     | [data] copytool_in thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:09,308 | INFO     | [payload] failed_post thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:09,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-25 07:20:24] 2025-05-24 22:20:13,797 | INFO     | [data] queue_monitor thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:17,725 | INFO     | job.realtimelogging is not enabled
[2025-05-25 07:20:24] 2025-05-24 22:20:18,730 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-25 07:20:24] 2025-05-24 22:20:19,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836526016320)>', '<ExcThread(monitor, started 139836174345984)>']
[2025-05-25 07:20:24] 2025-05-24 22:20:19,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-25 07:20:24] 2025-05-24 22:20:19,391 | INFO     | [monitor] control thread has ended
[2025-05-25 07:20:24] 2025-05-24 22:20:24,188 | INFO     | all workflow threads have been joined
[2025-05-25 07:20:24] 2025-05-24 22:20:24,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-25 07:20:24] 2025-05-24 22:20:24,189 | INFO     | traces error code: 0
[2025-05-25 07:20:24] 2025-05-24 22:20:24,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-25 07:20:24] 2025-05-24 22:20:24,274 [wrapper] ==== pilot stdout END ====
[2025-05-25 07:20:24] 2025-05-24 22:20:24,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-25 07:20:24] 2025-05-24 22:20:24,278 [wrapper] pilotpid: 2153806
[2025-05-25 07:20:24] 2025-05-24 22:20:24,280 [wrapper] Pilot exit status: 0
[2025-05-25 07:20:24] 2025-05-24 22:20:24,287 [wrapper] pandaids: 6665381375
[2025-05-25 07:20:24] 2025-05-24 22:20:24,309 [wrapper] cleanup supervisor_pilot 2215002 2153807
[2025-05-25 07:20:24] 2025-05-24 22:20:24,311 [wrapper] Test setup, not cleaning
[2025-05-25 07:20:24] 2025-05-24 22:20:24,313 [wrapper] apfmon messages muted
[2025-05-25 07:20:24] 2025-05-24 22:20:24,314 [wrapper] ==== wrapper stdout END ====
[2025-05-25 07:20:24] 2025-05-24 22:20:24,316 [wrapper] ==== wrapper stderr END ====
[2025-05-25 07:20:24]  *** Error codes and diagnostics ***
[2025-05-25 07:20:24]     "exeErrorCode": 0,
[2025-05-25 07:20:24]     "exeErrorDiag": "",
[2025-05-25 07:20:24]     "pilotErrorCode": 0,
[2025-05-25 07:20:24]     "pilotErrorDiag": "",
[2025-05-25 07:20:24]  *** Listing of results directory ***
[2025-05-25 07:20:24] total 414888
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc    495897 May 24 20:19 pilot3.tar.gz
[2025-05-25 07:20:24] -rwx------. 1 boinc boinc     37140 May 24 20:24 runpilot2-wrapper.sh
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc      5111 May 24 20:24 queuedata.json
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc       100 May 25 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-25 07:20:24] -rwxr-xr-x. 1 boinc boinc      7986 May 25 05:56 run_atlas
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc       105 May 25 05:56 job.xml
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc      9510 May 25 05:56 init_data.xml
[2025-05-25 07:20:24] -rw-r--r--. 2 boinc boinc 223687906 May 25 05:56 EVNT.44871834._000650.pool.root.1
[2025-05-25 07:20:24] -rw-r--r--. 2 boinc boinc     15093 May 25 05:56 start_atlas.sh
[2025-05-25 07:20:24] drwxrwx--x. 2 boinc boinc        68 May 25 05:56 shared
[2025-05-25 07:20:24] -rw-r--r--. 2 boinc boinc    508871 May 25 05:56 input.tar.gz
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc         0 May 25 05:56 boinc_lockfile
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc      2557 May 25 05:56 pandaJob.out
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc    990811 May 25 05:56 agis_schedconf.cvmfs.json
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc   1596740 May 25 05:56 agis_ddmendpoints.agis.ALL.json
[2025-05-25 07:20:24] drwx------. 4 boinc boinc      4096 May 25 05:56 pilot3
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc        95 May 25 07:19 pilot_heartbeat.json
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc 195816334 May 25 07:19 HITS.44871837._016242.pool.root.1
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc       530 May 25 07:19 boinc_task_state.xml
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc      1021 May 25 07:19 memory_monitor_summary.json
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc    276277 May 25 07:20 log.44871837._016242.job.log.tgz.1
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc      7664 May 25 07:20 heartbeat.json
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc      8192 May 25 07:20 boinc_mmap_file
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc        27 May 25 07:20 wrapper_checkpoint.txt
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc      4427 May 25 07:20 pilotlog.txt
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc    485094 May 25 07:20 log.44871837._016242.job.log.1
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc       357 May 25 07:20 output.list
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc       620 May 25 07:20 runtime_log
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc    778240 May 25 07:20 result.tar.gz
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc      8631 May 25 07:20 runtime_log.err
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc       641 May 25 07:20 qpIKDmgA2c7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRHRKDmdVxMVm.diag
[2025-05-25 07:20:24] -rw-r--r--. 1 boinc boinc     21053 May 25 07:20 stderr.txt
[2025-05-25 07:20:24] HITS file was successfully produced:
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc 195816334 May 25 07:19 shared/HITS.pool.root.1
[2025-05-25 07:20:24]  *** Contents of shared directory: ***
[2025-05-25 07:20:24] total 410952
[2025-05-25 07:20:24] -rw-r--r--. 2 boinc boinc 223687906 May 25 05:56 ATLAS.root_0
[2025-05-25 07:20:24] -rw-r--r--. 2 boinc boinc     15093 May 25 05:56 start_atlas.sh
[2025-05-25 07:20:24] -rw-r--r--. 2 boinc boinc    508871 May 25 05:56 input.tar.gz
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc 195816334 May 25 07:19 HITS.pool.root.1
[2025-05-25 07:20:24] -rw-------. 1 boinc boinc    778240 May 25 07:20 result.tar.gz
07:20:25 (2150104): run_atlas exited; CPU time 25111.106098
07:20:25 (2150104): called boinc_finish(0)

</stderr_txt>
]]>

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